RNA–Protein interactions for RNA: ENSMUST00000060820.7

Nkx3-2-201, Transcript of Homeobox protein Nkx-3.2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-2, Length 1,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2-201ENSMUST00000060820 Krtap13-1Q8K198 168 aa14.15□□□□□ -0.14
Nkx3-2-201ENSMUST00000060820 Gm17606F6ZL36 78 aa14.12□□□□□ -0.15
Nkx3-2-201ENSMUST00000060820 Krtap3-1A2A591 98 aa14.11□□□□□ -0.15
Nkx3-2-201ENSMUST00000060820 Crct1Q6PAI5 102 aa14.11□□□□□ -0.15
Nkx3-2-201ENSMUST00000060820 Fam229aB2KGE5 128 aa14.1□□□□□ -0.15
Nkx3-2-201ENSMUST00000060820 Krtap19-1Q925H2 87 aa14.05□□□□□ -0.16
Nkx3-2-201ENSMUST00000060820 Krtap19-3Q925H6 87 aa13.98□□□□□ -0.17
Nkx3-2-201ENSMUST00000060820 Sec61gP60060 68 aa13.94□□□□□ -0.18
Nkx3-2-201ENSMUST00000060820 Krtap1-3A2A588 173 aa13.93□□□□□ -0.18
Nkx3-2-201ENSMUST00000060820 Krtap1-5A2A590 122 aa13.93□□□□□ -0.18
Nkx3-2-201ENSMUST00000060820 Gm10382Q3V0T5 144 aa13.93□□□□□ -0.18
Nkx3-2-201ENSMUST00000060820 4932415D10RikA0A1W2P6U8 4986 aa13.93□□□□□ -0.18
Nkx3-2-201ENSMUST00000060820 Sox16Q62247 57 aa13.93□□□□□ -0.18
Nkx3-2-201ENSMUST00000060820 Ubr4A2AN08 5180 aa13.91□□□□□ -0.18
Nkx3-2-201ENSMUST00000060820 Gm10318A0A1W2P728 225 aa13.87□□□□□ -0.19
Nkx3-2-201ENSMUST00000060820 4933415A04RikQ9D443 101 aa13.83□□□□□ -0.2
Nkx3-2-201ENSMUST00000060820 Gm10337F7DEP7 55 aa13.78□□□□□ -0.2
Nkx3-2-201ENSMUST00000060820 Gm19402J3QJV4 266 aa13.7□□□□□ -0.22
Nkx3-2-201ENSMUST00000060820 H2al1kJ3QP08 105 aa13.7□□□□□ -0.22
Nkx3-2-201ENSMUST00000060820 H2al1mQ9DAD9 105 aa13.7□□□□□ -0.22
Nkx3-2-201ENSMUST00000060820 ZanO88799 5376 aa13.63□□□□□ -0.23
Nkx3-2-201ENSMUST00000060820 BC029722A0A0N4SW31 51 aa13.59□□□□□ -0.23
Nkx3-2-201ENSMUST00000060820 1700042G07RikB1AUF7 90 aa13.59□□□□□ -0.23
Nkx3-2-201ENSMUST00000060820 Gm9955Q8CEJ8 102 aa13.59□□□□□ -0.23
Nkx3-2-201ENSMUST00000060820 Gm20537G3UYK7 97 aa13.59□□□□□ -0.23
Nkx3-2-201ENSMUST00000060820 LorP18165 486 aa13.54□□□□□ -0.24
Nkx3-2-201ENSMUST00000060820 Krtap1-4Q3V2D6 188 aa13.46□□□□□ -0.25
Nkx3-2-201ENSMUST00000060820 Rnf213E9Q555 5152 aaKnown RBP13.41□□□□□ -0.26
Nkx3-2-201ENSMUST00000060820 Fat4Q2PZL6 4981 aa13.4□□□□□ -0.26
Nkx3-2-201ENSMUST00000060820 Gm19426M0QWC7 77 aa13.37□□□□□ -0.27
Nkx3-2-201ENSMUST00000060820 SvipQ3UZP4 77 aa13.34□□□□□ -0.27
Nkx3-2-201ENSMUST00000060820 Gm3646F6S692 53 aa13.27□□□□□ -0.28
Nkx3-2-201ENSMUST00000060820 Ndufs5Q99LY9 106 aa13.23□□□□□ -0.29
Nkx3-2-201ENSMUST00000060820 Spink7Q6IE32 76 aa13□□□□□ -0.33
Nkx3-2-201ENSMUST00000060820 Gm3880A0A1B0GSB3 72 aa12.98□□□□□ -0.33
Nkx3-2-201ENSMUST00000060820 CriptO70333 101 aa12.98□□□□□ -0.33
Nkx3-2-201ENSMUST00000060820 Gm17402F6Z0L5 76 aa12.97□□□□□ -0.33
Nkx3-2-201ENSMUST00000060820 SspoQ8CG65 4998 aa12.89□□□□□ -0.35
Nkx3-2-201ENSMUST00000060820 B930094E09RikQ8C4T2 136 aa12.88□□□□□ -0.35
Nkx3-2-201ENSMUST00000060820 Pla2g10Q9QXX3 151 aa12.79□□□□□ -0.36
Nkx3-2-201ENSMUST00000060820 Lce1jD3YUU5 139 aa12.78□□□□□ -0.36
Nkx3-2-201ENSMUST00000060820 Sprr2a3Q4KL71 83 aa12.78□□□□□ -0.36
Nkx3-2-201ENSMUST00000060820 Sprr2a1Q9CQK8 83 aa12.78□□□□□ -0.36
Nkx3-2-201ENSMUST00000060820 Krtap12-1Q9Z287 130 aa12.78□□□□□ -0.36
Nkx3-2-201ENSMUST00000060820 Gm10061D3Z714 54 aa12.7□□□□□ -0.38
Nkx3-2-201ENSMUST00000060820 Krtap19-9aF8WH65 55 aa12.63□□□□□ -0.39
Nkx3-2-201ENSMUST00000060820 Gm12216A0A1W2P827 62 aa12.47□□□□□ -0.41
Nkx3-2-201ENSMUST00000060820 Krtap19-2Q925I0 141 aa12.47□□□□□ -0.41
Nkx3-2-201ENSMUST00000060820 Prm2P07978 107 aa12.42□□□□□ -0.42
Nkx3-2-201ENSMUST00000060820 Krtap9-5A2A5X3 358 aa12.4□□□□□ -0.43
Nkx3-2-201ENSMUST00000060820 Krtap17-1A2A5X6 109 aa12.37□□□□□ -0.43
Nkx3-2-201ENSMUST00000060820 Romo1P60603 79 aa12.35□□□□□ -0.43
Nkx3-2-201ENSMUST00000060820 Gm11569B1AQB1 180 aa12.2□□□□□ -0.46
Nkx3-2-201ENSMUST00000060820 Gm21887J3QQ04 176 aa12.19□□□□□ -0.46
Nkx3-2-201ENSMUST00000060820 Gm19668J3QMD1 248 aa12.11□□□□□ -0.47
Nkx3-2-201ENSMUST00000060820 Lce1iQ9D6P5 149 aa12.01□□□□□ -0.49
Nkx3-2-201ENSMUST00000060820 Muc5bE9Q5I3 4800 aa12□□□□□ -0.49
Nkx3-2-201ENSMUST00000060820 Camk2n1Q6QWF9 78 aa11.97□□□□□ -0.49
Nkx3-2-201ENSMUST00000060820 Gm11562A0PK51 136 aa11.97□□□□□ -0.49
Nkx3-2-201ENSMUST00000060820 Lce1a2Q9D1K4 149 aa11.85□□□□□ -0.51
Nkx3-2-201ENSMUST00000060820 Krtap4-2B1AQ85 167 aa11.82□□□□□ -0.52
Nkx3-2-201ENSMUST00000060820 Gm6358A0A087WPH4 74 aa11.79□□□□□ -0.52
Nkx3-2-201ENSMUST00000060820 Lce1gQ9D195 139 aa11.69□□□□□ -0.54
Nkx3-2-201ENSMUST00000060820 Mt2P02798 61 aa11.49□□□□□ -0.57
Nkx3-2-201ENSMUST00000060820 Krtap8-1O08633 61 aa11.49□□□□□ -0.57
Nkx3-2-201ENSMUST00000060820 Syne2Q6ZWQ0 6874 aaKnown RBP11.43□□□□□ -0.58
Nkx3-2-201ENSMUST00000060820 Gm11555B1AQ89 175 aa11.43□□□□□ -0.58
Nkx3-2-201ENSMUST00000060820 Krtap19-9bQ99NG9 58 aa11.4□□□□□ -0.58
Nkx3-2-201ENSMUST00000060820 Gm11596B1AQB0 205 aa11.26□□□□□ -0.61
Nkx3-2-201ENSMUST00000060820 Krtap7-1Q9D3I6 87 aa11.23□□□□□ -0.61
Nkx3-2-201ENSMUST00000060820 Krtap4-6Q3V4B7 195 aa11.21□□□□□ -0.62
Nkx3-2-201ENSMUST00000060820 Mdn1A2ANY6 5589 aaKnown RBP11.17□□□□□ -0.62
Nkx3-2-201ENSMUST00000060820 Gm40193A0A1B0GT39 78 aa11.15□□□□□ -0.62
Nkx3-2-201ENSMUST00000060820 Krtap4-1Q3UUY3 169 aa11□□□□□ -0.65
Nkx3-2-201ENSMUST00000060820 Krtap22-2J3QNX6 67 aa10.89□□□□□ -0.67
Nkx3-2-201ENSMUST00000060820 Tnp1P10856 55 aa10.84□□□□□ -0.67
Nkx3-2-201ENSMUST00000060820 Mp68P56379 58 aa10.83□□□□□ -0.68
Nkx3-2-201ENSMUST00000060820 Gm11564A2A4L9 201 aa10.74□□□□□ -0.69
Nkx3-2-201ENSMUST00000060820 Gm11563B1AQ90 168 aa10.74□□□□□ -0.69
Nkx3-2-201ENSMUST00000060820 Gm11595B1AQA7 289 aa10.74□□□□□ -0.69
Nkx3-2-201ENSMUST00000060820 Krtap4-8B1AQA8 209 aa10.74□□□□□ -0.69
Nkx3-2-201ENSMUST00000060820 Krtap9-3Q3V2C1 136 aa10.7□□□□□ -0.7
Nkx3-2-201ENSMUST00000060820 Lce1hQ9D6R3 140 aa10.62□□□□□ -0.71
Nkx3-2-201ENSMUST00000060820 Krtap4-9B1AQA9 244 aa10.41□□□□□ -0.74
Nkx3-2-201ENSMUST00000060820 Mt4P47945 62 aa10.29□□□□□ -0.76
Nkx3-2-201ENSMUST00000060820 2310046K23RikA0A0A6YVW6 87 aa10.26□□□□□ -0.77
Nkx3-2-201ENSMUST00000060820 Fsip2A2ARZ3 6995 aa10.23□□□□□ -0.77
Nkx3-2-201ENSMUST00000060820 Lce1bQ9D149 137 aa10.1□□□□□ -0.79
Nkx3-2-201ENSMUST00000060820 Krtap4-13Q9D7P3 165 aa10.03□□□□□ -0.8
Nkx3-2-201ENSMUST00000060820 Gm10272F7CZ33 110 aa9.96□□□□□ -0.81
Nkx3-2-201ENSMUST00000060820 Gm38119A0A0A6YX29 146 aa9.93□□□□□ -0.82
Nkx3-2-201ENSMUST00000060820 Krtap6-3A0A087WQL6 57 aa9.87□□□□□ -0.83
Nkx3-2-201ENSMUST00000060820 Sprr2kO70562 68 aa9.83□□□□□ -0.84
Nkx3-2-201ENSMUST00000060820 2300003K06RikA2A4M0 262 aa9.71□□□□□ -0.85
Nkx3-2-201ENSMUST00000060820 Lce1lQ9D1G7 135 aa9.57□□□□□ -0.88
Nkx3-2-201ENSMUST00000060820 Krtap4-7Q9D732 168 aa9.55□□□□□ -0.88
Nkx3-2-201ENSMUST00000060820 Gm11938Q9D3H4 131 aa9.52□□□□□ -0.89
Nkx3-2-201ENSMUST00000060820 Gm20538F6Z9R1 75 aa9.5□□□□□ -0.89
Nkx3-2-201ENSMUST00000060820 Lce3bQ9CQM7 98 aa9.47□□□□□ -0.89
Nkx3-2-201ENSMUST00000060820 Syne1Q6ZWR6 8799 aa9.43□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 55.8 ms