RNA–Protein interactions for RNA: ENSMUST00000060820.7

Nkx3-2-201, Transcript of Homeobox protein Nkx-3.2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-2, Length 1,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2-201ENSMUST00000060820 Gm35339A0A140LHH9 1649 aa60.4■■■■■ 7.26
Nkx3-2-201ENSMUST00000060820 NischQ80TM9 1593 aa60.24■■■■■ 7.23
Nkx3-2-201ENSMUST00000060820 Abcc9P70170 1546 aa58.51■■■■■ 6.96
Nkx3-2-201ENSMUST00000060820 Abcc8B2RUS7 1588 aa57.71■■■■■ 6.83
Nkx3-2-201ENSMUST00000060820 ScribQ80U72 1612 aa54.72■■■■■ 6.35
Nkx3-2-201ENSMUST00000060820 Dcaf1Q80TR8 1506 aa53.66■■■■■ 6.18
Nkx3-2-201ENSMUST00000060820 Rhox8Q6VSS7 320 aa53.62■■■■■ 6.17
Nkx3-2-201ENSMUST00000060820 Kdm5dQ62240 1548 aa53.27■■■■■ 6.12
Nkx3-2-201ENSMUST00000060820 NacadQ5SWP3 1504 aa53.13■■■■■ 6.1
Nkx3-2-201ENSMUST00000060820 Rb1cc1Q9ESK9 1588 aa52.7■■■■■ 6.03
Nkx3-2-201ENSMUST00000060820 Ccdc180J3QNE4 1664 aa52.41■■■■■ 5.98
Nkx3-2-201ENSMUST00000060820 Baz1aO88379 1555 aa52.06■■■■■ 5.92
Nkx3-2-201ENSMUST00000060820 Rtl1Q7M732 1744 aa52.02■■■■■ 5.92
Nkx3-2-201ENSMUST00000060820 Sycp2Q9CUU3 1500 aa52.01■■■■■ 5.92
Nkx3-2-201ENSMUST00000060820 Crybg2B7ZCC2 1516 aa51.52■■■■■ 5.84
Nkx3-2-201ENSMUST00000060820 BicraF8VPZ9 1578 aa51.04■■■■■ 5.76
Nkx3-2-201ENSMUST00000060820 Zcchc6Q5BLK4 1491 aaKnown RBP50.93■■■■■ 5.74
Nkx3-2-201ENSMUST00000060820 Smarca2Q6DIC0 1577 aa50.73■■■■■ 5.71
Nkx3-2-201ENSMUST00000060820 Ccdc136Q3TVA9 1136 aa49.88■■■■■ 5.57
Nkx3-2-201ENSMUST00000060820 Cecr2E9Q2Z1 1453 aa49.75■■■■■ 5.55
Nkx3-2-201ENSMUST00000060820 Smarca4Q3TKT4 1613 aaKnown RBP49.45■■■■■ 5.51
Nkx3-2-201ENSMUST00000060820 Brd4Q9ESU6 1400 aaKnown RBP49.32■■■■■ 5.49
Nkx3-2-201ENSMUST00000060820 Trim41Q5NCC3 630 aa49.2■■■■■ 5.47
Nkx3-2-201ENSMUST00000060820 Pds5bQ4VA53 1446 aaKnown RBP49.16■■■■■ 5.46
Nkx3-2-201ENSMUST00000060820 Synj1Q8CHC4 1574 aa49.12■■■■■ 5.45
Nkx3-2-201ENSMUST00000060820 Atad2bE9Q166 1460 aaKnown RBP49.07■■■■■ 5.45
Nkx3-2-201ENSMUST00000060820 Cttnbp2B9EJA2 1648 aa48.99■■■■■ 5.43
Nkx3-2-201ENSMUST00000060820 CftrP26361 1476 aa48.95■■■■■ 5.43
Nkx3-2-201ENSMUST00000060820 Iqgap2Q3UQ44 1575 aa48.94■■■■■ 5.42
Nkx3-2-201ENSMUST00000060820 Ercc6F8VPZ5 1481 aa48.24■■■■■ 5.31
Nkx3-2-201ENSMUST00000060820 Wdr62Q3U3T8 1523 aa48.22■■■■■ 5.31
Nkx3-2-201ENSMUST00000060820 Golga3P55937 1487 aa48.22■■■■■ 5.31
Nkx3-2-201ENSMUST00000060820 Thoc2B1AZI6 1594 aaKnown RBP48.21■■■■■ 5.31
Nkx3-2-201ENSMUST00000060820 Esf1Q3V1V3 845 aaKnown RBP48.12■■■■■ 5.29
Nkx3-2-201ENSMUST00000060820 Frmpd1A2AKB4 1549 aa48.11■■■■■ 5.29
Nkx3-2-201ENSMUST00000060820 HrcG5E8J6 738 aa48.1■■■■■ 5.29
Nkx3-2-201ENSMUST00000060820 Top2bQ64511 1612 aa48.08■■■■■ 5.29
Nkx3-2-201ENSMUST00000060820 Cngb1E1AZ71 1325 aa47.94■■■■■ 5.26
Nkx3-2-201ENSMUST00000060820 Unc13aQ4KUS2 1712 aa47.78■■■■■ 5.24
Nkx3-2-201ENSMUST00000060820 Cc2d2aQ8CFW7 1633 aa47.61■■■■■ 5.21
Nkx3-2-201ENSMUST00000060820 Fam135aQ6NS59 1506 aa47.45■■■■■ 5.19
Nkx3-2-201ENSMUST00000060820 Rsf1E9PWW9 1441 aaKnown RBP47.4■■■■■ 5.18
Nkx3-2-201ENSMUST00000060820 Phldb1Q6PDH0 1371 aaKnown RBP47.37■■■■■ 5.17
Nkx3-2-201ENSMUST00000060820 Cep164Q5DU05 1446 aa47.37■■■■■ 5.17
Nkx3-2-201ENSMUST00000060820 Ccdc88bQ4QRL3 1481 aa47.36■■■■■ 5.17
Nkx3-2-201ENSMUST00000060820 Fmn1Q05860 1466 aa47.34■■■■■ 5.17
Nkx3-2-201ENSMUST00000060820 TnnQ80Z71 1560 aa47.23■■■■■ 5.15
Nkx3-2-201ENSMUST00000060820 Lamc3Q9R0B6 1581 aa47.2■■■■■ 5.15
Nkx3-2-201ENSMUST00000060820 Chic1Q8CBW7 227 aa47.16■■■■■ 5.14
Nkx3-2-201ENSMUST00000060820 Kif15Q6P9L6 1387 aa46.92■■■■■ 5.1
Nkx3-2-201ENSMUST00000060820 Dnajc5bQ9CQ94 199 aa46.89■■■■■ 5.1
Nkx3-2-201ENSMUST00000060820 Baz1bQ9Z277 1479 aa46.86■■■■■ 5.09
Nkx3-2-201ENSMUST00000060820 Top2aQ01320 1528 aaKnown RBP46.84■■■■■ 5.09
Nkx3-2-201ENSMUST00000060820 Ubl4bQ9CQ84 188 aa46.81■■■■■ 5.08
Nkx3-2-201ENSMUST00000060820 Camsap1A2AHC3 1581 aa46.56■■■■■ 5.04
Nkx3-2-201ENSMUST00000060820 Cux2P70298 1426 aa46.5■■■■■ 5.04
Nkx3-2-201ENSMUST00000060820 Ccdc18Q640L5 1455 aa46.43■■■■■ 5.02
Nkx3-2-201ENSMUST00000060820 Gab3Q8BSM5 595 aa46.33■■■■■ 5.01
Nkx3-2-201ENSMUST00000060820 Mrc2Q64449 1479 aa46.31■■■■■ 5
Nkx3-2-201ENSMUST00000060820 Il27Q8K3I6 234 aa46.16■■■■■ 4.98
Nkx3-2-201ENSMUST00000060820 Rapgef2Q8CHG7 1496 aa46.11■■■■■ 4.97
Nkx3-2-201ENSMUST00000060820 Npm1Q61937 292 aaKnown RBP46.08■■■■■ 4.97
Nkx3-2-201ENSMUST00000060820 Grin2bQ01097 1482 aa46.03■■■■■ 4.96
Nkx3-2-201ENSMUST00000060820 NrkQ9R0G8 1455 aa45.96■■■■■ 4.95
Nkx3-2-201ENSMUST00000060820 Kif21aQ9QXL2 1672 aa45.93■■■■■ 4.94
Nkx3-2-201ENSMUST00000060820 LrpprcQ6PB66 1392 aaKnown RBP45.87■■■■■ 4.93
Nkx3-2-201ENSMUST00000060820 Shroom4Q1W617 1475 aa45.86■■■■■ 4.93
Nkx3-2-201ENSMUST00000060820 PtprkP35822 1457 aa45.79■■■■■ 4.92
Nkx3-2-201ENSMUST00000060820 PogzQ8BZH4 1409 aaKnown RBP45.77■■■■■ 4.92
Nkx3-2-201ENSMUST00000060820 Eif4g1Q6NZJ6 1600 aaKnown RBP45.74■■■■■ 4.91
Nkx3-2-201ENSMUST00000060820 Cep162Q6ZQ06 1403 aa45.7■■■■■ 4.91
Nkx3-2-201ENSMUST00000060820 Npm2Q80W85 207 aa45.66■■■■■ 4.9
Nkx3-2-201ENSMUST00000060820 Dhx29Q6PGC1 1365 aaKnown RBP45.65■■■■■ 4.9
Nkx3-2-201ENSMUST00000060820 Duox2A2AQ99 1517 aa45.62■■■■■ 4.89
Nkx3-2-201ENSMUST00000060820 Crocc2F6XLV1 1638 aa45.59■■■■■ 4.89
Nkx3-2-201ENSMUST00000060820 Efcab5A0JP43 1406 aa45.58■■■■■ 4.89
Nkx3-2-201ENSMUST00000060820 Arhgap35Q91YM2 1499 aa45.45■■■■■ 4.87
Nkx3-2-201ENSMUST00000060820 Samd9lQ69Z37 1561 aa45.37■■■■■ 4.85
Nkx3-2-201ENSMUST00000060820 Map3k1P53349 1493 aa45.36■■■■■ 4.85
Nkx3-2-201ENSMUST00000060820 Mroh2bQ7M6Y6 1581 aa45.31■■■■■ 4.84
Nkx3-2-201ENSMUST00000060820 Lrriq1Q0P5X1 1673 aa45.3■■■■■ 4.84
Nkx3-2-201ENSMUST00000060820 Myt1lP97500 1187 aa45.18■■■■■ 4.82
Nkx3-2-201ENSMUST00000060820 Urb2E9Q7L1 1524 aaKnown RBP45.17■■■■■ 4.82
Nkx3-2-201ENSMUST00000060820 Plb1Q3TTY0 1478 aa45.16■■■■■ 4.82
Nkx3-2-201ENSMUST00000060820 SynmQ70IV5 1561 aa45.13■■■■■ 4.82
Nkx3-2-201ENSMUST00000060820 AqrQ8CFQ3 1481 aaKnown RBP45.11■■■■■ 4.81
Nkx3-2-201ENSMUST00000060820 Zeb1Q64318 1117 aa45.1■■■■■ 4.81
Nkx3-2-201ENSMUST00000060820 Rad54l2Q99NG0 1466 aa44.95■■■■■ 4.79
Nkx3-2-201ENSMUST00000060820 Clip1Q922J3 1391 aa44.94■■■■■ 4.78
Nkx3-2-201ENSMUST00000060820 Ift140E9PY46 1464 aa44.9■■■■■ 4.78
Nkx3-2-201ENSMUST00000060820 Pbrm1Q8BSQ9 1634 aaKnown RBP44.88■■■■■ 4.78
Nkx3-2-201ENSMUST00000060820 Ehmt2Q9Z148 1263 aaKnown RBP44.87■■■■■ 4.77
Nkx3-2-201ENSMUST00000060820 Carmil1Q6EDY6 1374 aa44.86■■■■■ 4.77
Nkx3-2-201ENSMUST00000060820 Setd1bQ8CFT2 1985 aa44.85■■■■■ 4.77
Nkx3-2-201ENSMUST00000060820 Disp1Q3TDN0 1521 aa44.84■■■■■ 4.77
Nkx3-2-201ENSMUST00000060820 Magi3Q9EQJ9 1476 aa44.81■■■■■ 4.76
Nkx3-2-201ENSMUST00000060820 Pla2r1Q62028 1487 aa44.74■■■■■ 4.75
Nkx3-2-201ENSMUST00000060820 Grin2aP35436 1464 aa44.72■■■■■ 4.75
Nkx3-2-201ENSMUST00000060820 Gpatch8A2A6A1 1505 aa44.7■■■■■ 4.75
Nkx3-2-201ENSMUST00000060820 Polr1aO35134 1717 aaKnown RBP44.68■■■■■ 4.74
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms