RNA–Protein interactions for RNA: ENSMUST00000047511.13

Shtn1-201, Transcript of Shootin-1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Shtn1, Length 4,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1-201ENSMUST00000047511 Dync1h1Q9JHU4 4644 aaKnown RBP5.96□□□□□ -1.46
Shtn1-201ENSMUST00000047511 Dnah2P0C6F1 4456 aa5.95□□□□□ -1.46
Shtn1-201ENSMUST00000047511 Krtap3-2Q9D638 99 aa5.93□□□□□ -1.46
Shtn1-201ENSMUST00000047511 Krtap3-3Q9D7P0 99 aa5.93□□□□□ -1.46
Shtn1-201ENSMUST00000047511 Gm17416Q30KP4 66 aa5.92□□□□□ -1.46
Shtn1-201ENSMUST00000047511 2210017I01RikA0A0A6YVV1 95 aa5.86□□□□□ -1.47
Shtn1-201ENSMUST00000047511 Fat3Q8BNA6 4555 aa5.83□□□□□ -1.48
Shtn1-201ENSMUST00000047511 Fat2Q5F226 4351 aa5.81□□□□□ -1.48
Shtn1-201ENSMUST00000047511 B930094E09RikQ8C4T2 136 aa5.8□□□□□ -1.48
Shtn1-201ENSMUST00000047511 Pkhd1E9PZ36 4059 aa5.77□□□□□ -1.49
Shtn1-201ENSMUST00000047511 SacsQ9JLC8 4582 aa5.77□□□□□ -1.49
Shtn1-201ENSMUST00000047511 Krtap13-1Q8K198 168 aa5.77□□□□□ -1.49
Shtn1-201ENSMUST00000047511 Mycbp2Q7TPH6 4711 aa5.76□□□□□ -1.49
Shtn1-201ENSMUST00000047511 Gm18596A0A1W2P860 280 aa5.74□□□□□ -1.49
Shtn1-201ENSMUST00000047511 Gm40193A0A1B0GT39 78 aa5.74□□□□□ -1.49
Shtn1-201ENSMUST00000047511 Ryr2E9Q401 4966 aaKnown RBP5.73□□□□□ -1.49
Shtn1-201ENSMUST00000047511 HydinQ80W93 5154 aa5.73□□□□□ -1.49
Shtn1-201ENSMUST00000047511 Kiaa1109A2AAE1 5005 aa5.72□□□□□ -1.49
Shtn1-201ENSMUST00000047511 Pkhd1l1Q80ZA4 4249 aa5.71□□□□□ -1.49
Shtn1-201ENSMUST00000047511 Abca13Q5SSE9 5034 aa5.69□□□□□ -1.5
Shtn1-201ENSMUST00000047511 Herc2Q4U2R1 4836 aa5.68□□□□□ -1.5
Shtn1-201ENSMUST00000047511 Krtap3-1A2A591 98 aa5.64□□□□□ -1.51
Shtn1-201ENSMUST00000047511 Kmt2cQ8BRH4 4903 aa5.61□□□□□ -1.51
Shtn1-201ENSMUST00000047511 Tnp1P10856 55 aa5.58□□□□□ -1.52
Shtn1-201ENSMUST00000047511 Lrp2A2ARV4 4660 aa5.58□□□□□ -1.52
Shtn1-201ENSMUST00000047511 Dnah8Q91XQ0 4731 aa5.51□□□□□ -1.53
Shtn1-201ENSMUST00000047511 Lce1mQ9CR91 182 aa5.5□□□□□ -1.53
Shtn1-201ENSMUST00000047511 Gm17402F6Z0L5 76 aa5.42□□□□□ -1.54
Shtn1-201ENSMUST00000047511 Gm19668J3QMD1 248 aa5.4□□□□□ -1.54
Shtn1-201ENSMUST00000047511 LorP18165 486 aa5.4□□□□□ -1.54
Shtn1-201ENSMUST00000047511 Dnhd1D3Z2X2 4750 aa5.39□□□□□ -1.55
Shtn1-201ENSMUST00000047511 PcloQ9QYX7 5068 aa5.38□□□□□ -1.55
Shtn1-201ENSMUST00000047511 Krtap7-1Q9D3I6 87 aa5.36□□□□□ -1.55
Shtn1-201ENSMUST00000047511 Birc6O88738 4882 aa5.31□□□□□ -1.56
Shtn1-201ENSMUST00000047511 Krtap1-5A2A590 122 aa5.28□□□□□ -1.56
Shtn1-201ENSMUST00000047511 Gm19402J3QJV4 266 aa5.25□□□□□ -1.57
Shtn1-201ENSMUST00000047511 Herc1E9PZP8 4859 aa5.22□□□□□ -1.57
Shtn1-201ENSMUST00000047511 Krtap1-4Q3V2D6 188 aa5.16□□□□□ -1.58
Shtn1-201ENSMUST00000047511 Sprr2a3Q4KL71 83 aa5.12□□□□□ -1.59
Shtn1-201ENSMUST00000047511 Sprr2a1Q9CQK8 83 aa5.12□□□□□ -1.59
Shtn1-201ENSMUST00000047511 Krtap16-3Q8C1I6 86 aa5.11□□□□□ -1.59
Shtn1-201ENSMUST00000047511 Prm1P02319 51 aa5.09□□□□□ -1.6
Shtn1-201ENSMUST00000047511 Ubr4A2AN08 5180 aa5.09□□□□□ -1.6
Shtn1-201ENSMUST00000047511 Krtap19-9aF8WH65 55 aa5.07□□□□□ -1.6
Shtn1-201ENSMUST00000047511 Krtap19-3Q925H6 87 aa5.06□□□□□ -1.6
Shtn1-201ENSMUST00000047511 Gm7735D3YX18 52 aa5.05□□□□□ -1.6
Shtn1-201ENSMUST00000047511 Krtap12-1Q9Z287 130 aa5.04□□□□□ -1.6
Shtn1-201ENSMUST00000047511 Fat4Q2PZL6 4981 aa4.99□□□□□ -1.61
Shtn1-201ENSMUST00000047511 Krtap19-1Q925H2 87 aa4.99□□□□□ -1.61
Shtn1-201ENSMUST00000047511 4932415D10RikA0A1W2P6U8 4986 aa4.93□□□□□ -1.62
Shtn1-201ENSMUST00000047511 ZanO88799 5376 aa4.93□□□□□ -1.62
Shtn1-201ENSMUST00000047511 Mdn1A2ANY6 5589 aaKnown RBP4.92□□□□□ -1.62
Shtn1-201ENSMUST00000047511 Gm9789Q8BIG3 52 aa4.92□□□□□ -1.62
Shtn1-201ENSMUST00000047511 Ush2AQ2QI47 5193 aa4.92□□□□□ -1.62
Shtn1-201ENSMUST00000047511 Krtap1-3A2A588 173 aa4.89□□□□□ -1.63
Shtn1-201ENSMUST00000047511 Gm6358A0A087WPH4 74 aa4.88□□□□□ -1.63
Shtn1-201ENSMUST00000047511 Krtap9-5A2A5X3 358 aa4.83□□□□□ -1.64
Shtn1-201ENSMUST00000047511 4933428G20RikQ9D3X4 101 aa4.83□□□□□ -1.64
Shtn1-201ENSMUST00000047511 Krtap8-1O08633 61 aa4.8□□□□□ -1.64
Shtn1-201ENSMUST00000047511 Hmcn2A2AJ76 5100 aa4.79□□□□□ -1.64
Shtn1-201ENSMUST00000047511 Krtap19-9bQ99NG9 58 aa4.78□□□□□ -1.64
Shtn1-201ENSMUST00000047511 Rnf213E9Q555 5152 aaKnown RBP4.75□□□□□ -1.65
Shtn1-201ENSMUST00000047511 Lce1jD3YUU5 139 aa4.74□□□□□ -1.65
Shtn1-201ENSMUST00000047511 Sprr2kO70562 68 aa4.7□□□□□ -1.66
Shtn1-201ENSMUST00000047511 Syne1Q6ZWR6 8799 aa4.65□□□□□ -1.67
Shtn1-201ENSMUST00000047511 Gm10061D3Z714 54 aa4.64□□□□□ -1.67
Shtn1-201ENSMUST00000047511 Krtap19-2Q925I0 141 aa4.62□□□□□ -1.67
Shtn1-201ENSMUST00000047511 Krtap17-1A2A5X6 109 aa4.6□□□□□ -1.67
Shtn1-201ENSMUST00000047511 Gm11569B1AQB1 180 aa4.58□□□□□ -1.68
Shtn1-201ENSMUST00000047511 Mt2P02798 61 aa4.54□□□□□ -1.68
Shtn1-201ENSMUST00000047511 Krtap4-2B1AQ85 167 aa4.46□□□□□ -1.7
Shtn1-201ENSMUST00000047511 Krtap22-2J3QNX6 67 aa4.39□□□□□ -1.71
Shtn1-201ENSMUST00000047511 Muc16A0A140LJ72 8478 aa4.39□□□□□ -1.71
Shtn1-201ENSMUST00000047511 Gm10272F7CZ33 110 aa4.39□□□□□ -1.71
Shtn1-201ENSMUST00000047511 Sprr2gO70558 76 aa4.36□□□□□ -1.71
Shtn1-201ENSMUST00000047511 Krtap4-6Q3V4B7 195 aa4.35□□□□□ -1.71
Shtn1-201ENSMUST00000047511 Lce1iQ9D6P5 149 aa4.35□□□□□ -1.71
Shtn1-201ENSMUST00000047511 Gm38119A0A0A6YX29 146 aa4.34□□□□□ -1.71
Shtn1-201ENSMUST00000047511 Lce1gQ9D195 139 aa4.33□□□□□ -1.72
Shtn1-201ENSMUST00000047511 Lce1a2Q9D1K4 149 aa4.31□□□□□ -1.72
Shtn1-201ENSMUST00000047511 Fsip2A2ARZ3 6995 aa4.29□□□□□ -1.72
Shtn1-201ENSMUST00000047511 Krtap9-3Q3V2C1 136 aa4.29□□□□□ -1.72
Shtn1-201ENSMUST00000047511 Lce3bQ9CQM7 98 aa4.25□□□□□ -1.73
Shtn1-201ENSMUST00000047511 SspoQ8CG65 4998 aa4.22□□□□□ -1.73
Shtn1-201ENSMUST00000047511 2310046K23RikA0A0A6YVW6 87 aa4.21□□□□□ -1.73
Shtn1-201ENSMUST00000047511 Mt4P47945 62 aa4.2□□□□□ -1.74
Shtn1-201ENSMUST00000047511 Krtap4-1Q3UUY3 169 aa4.19□□□□□ -1.74
Shtn1-201ENSMUST00000047511 Gm10100J3QK64 120 aa4.18□□□□□ -1.74
Shtn1-201ENSMUST00000047511 Gm11596B1AQB0 205 aa4.18□□□□□ -1.74
Shtn1-201ENSMUST00000047511 Lce3cQ91V05 98 aa4.17□□□□□ -1.74
Shtn1-201ENSMUST00000047511 Lce1hQ9D6R3 140 aa4.15□□□□□ -1.74
Shtn1-201ENSMUST00000047511 Muc5bE9Q5I3 4800 aa4.15□□□□□ -1.75
Shtn1-201ENSMUST00000047511 Syne2Q6ZWQ0 6874 aaKnown RBP4.1□□□□□ -1.75
Shtn1-201ENSMUST00000047511 Gm11564A2A4L9 201 aa4.08□□□□□ -1.76
Shtn1-201ENSMUST00000047511 Gm11563B1AQ90 168 aa4.08□□□□□ -1.76
Shtn1-201ENSMUST00000047511 Gm11595B1AQA7 289 aa4.08□□□□□ -1.76
Shtn1-201ENSMUST00000047511 Krtap4-8B1AQA8 209 aa4.08□□□□□ -1.76
Shtn1-201ENSMUST00000047511 Krtap4-9B1AQA9 244 aa4.07□□□□□ -1.76
Shtn1-201ENSMUST00000047511 Lce3eF8VQJ0 98 aa4.04□□□□□ -1.76
Shtn1-201ENSMUST00000047511 Lce3fQ6PAI4 98 aa4.04□□□□□ -1.76
Retrieved 100 of 22,080 RNA–protein pairs in 105.8 ms