RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 Fat2Q5F226 4351 aa7.42□□□□□ -1.22
Usp4-201ENSMUST00000035237 Fat1A0A1L1SQU7 4645 aa7.42□□□□□ -1.22
Usp4-201ENSMUST00000035237 2210017I01RikA0A0A6YVV1 95 aa7.39□□□□□ -1.23
Usp4-201ENSMUST00000035237 Ryr3A2AGL3 4863 aa7.37□□□□□ -1.23
Usp4-201ENSMUST00000035237 Pkhd1E9PZ36 4059 aa7.33□□□□□ -1.24
Usp4-201ENSMUST00000035237 Fat3Q8BNA6 4555 aa7.3□□□□□ -1.24
Usp4-201ENSMUST00000035237 Camk2n1Q6QWF9 78 aa7.21□□□□□ -1.25
Usp4-201ENSMUST00000035237 Krtap13-1Q8K198 168 aa7.21□□□□□ -1.25
Usp4-201ENSMUST00000035237 Pkhd1l1Q80ZA4 4249 aa7.19□□□□□ -1.26
Usp4-201ENSMUST00000035237 Krtap7-1Q9D3I6 87 aa7.18□□□□□ -1.26
Usp4-201ENSMUST00000035237 Sec61bQ9CQS8 96 aaKnown RBP7.17□□□□□ -1.26
Usp4-201ENSMUST00000035237 Mycbp2Q7TPH6 4711 aa7.16□□□□□ -1.26
Usp4-201ENSMUST00000035237 Gm9112A2AI92 75 aa7.16□□□□□ -1.26
Usp4-201ENSMUST00000035237 Gm40193A0A1B0GT39 78 aa7.15□□□□□ -1.27
Usp4-201ENSMUST00000035237 Gm10318A0A1W2P728 225 aa7.14□□□□□ -1.27
Usp4-201ENSMUST00000035237 Gm19668J3QMD1 248 aa7.09□□□□□ -1.27
Usp4-201ENSMUST00000035237 Gm19402J3QJV4 266 aa7.07□□□□□ -1.28
Usp4-201ENSMUST00000035237 Gm17402F6Z0L5 76 aa7.03□□□□□ -1.28
Usp4-201ENSMUST00000035237 Ryr1E9PZQ0 5035 aa7.02□□□□□ -1.29
Usp4-201ENSMUST00000035237 Crct1Q6PAI5 102 aa6.98□□□□□ -1.29
Usp4-201ENSMUST00000035237 Abca13Q5SSE9 5034 aa6.95□□□□□ -1.3
Usp4-201ENSMUST00000035237 HydinQ80W93 5154 aa6.87□□□□□ -1.31
Usp4-201ENSMUST00000035237 Kmt2cQ8BRH4 4903 aa6.84□□□□□ -1.31
Usp4-201ENSMUST00000035237 Dnah8Q91XQ0 4731 aa6.84□□□□□ -1.31
Usp4-201ENSMUST00000035237 Lrp2A2ARV4 4660 aa6.81□□□□□ -1.32
Usp4-201ENSMUST00000035237 Sprr2a3Q4KL71 83 aa6.8□□□□□ -1.32
Usp4-201ENSMUST00000035237 Sprr2a1Q9CQK8 83 aa6.8□□□□□ -1.32
Usp4-201ENSMUST00000035237 Kiaa1109A2AAE1 5005 aa6.79□□□□□ -1.32
Usp4-201ENSMUST00000035237 Krtap1-5A2A590 122 aa6.79□□□□□ -1.32
Usp4-201ENSMUST00000035237 Ryr2E9Q401 4966 aaKnown RBP6.71□□□□□ -1.33
Usp4-201ENSMUST00000035237 Tnp1P10856 55 aa6.71□□□□□ -1.34
Usp4-201ENSMUST00000035237 Herc2Q4U2R1 4836 aa6.66□□□□□ -1.34
Usp4-201ENSMUST00000035237 Krtap16-3Q8C1I6 86 aa6.49□□□□□ -1.37
Usp4-201ENSMUST00000035237 Dnhd1D3Z2X2 4750 aa6.49□□□□□ -1.37
Usp4-201ENSMUST00000035237 Krtap1-4Q3V2D6 188 aa6.46□□□□□ -1.38
Usp4-201ENSMUST00000035237 Krtap19-3Q925H6 87 aa6.34□□□□□ -1.4
Usp4-201ENSMUST00000035237 Krtap19-1Q925H2 87 aa6.33□□□□□ -1.4
Usp4-201ENSMUST00000035237 PcloQ9QYX7 5068 aa6.24□□□□□ -1.41
Usp4-201ENSMUST00000035237 Birc6O88738 4882 aa6.2□□□□□ -1.42
Usp4-201ENSMUST00000035237 Krtap19-9aF8WH65 55 aa6.17□□□□□ -1.42
Usp4-201ENSMUST00000035237 Krtap12-1Q9Z287 130 aa6.14□□□□□ -1.43
Usp4-201ENSMUST00000035237 Lce1jD3YUU5 139 aa6.13□□□□□ -1.43
Usp4-201ENSMUST00000035237 LorP18165 486 aa6.12□□□□□ -1.43
Usp4-201ENSMUST00000035237 Ubr4A2AN08 5180 aa6.12□□□□□ -1.43
Usp4-201ENSMUST00000035237 Fat4Q2PZL6 4981 aa6.1□□□□□ -1.43
Usp4-201ENSMUST00000035237 ZanO88799 5376 aa6.04□□□□□ -1.44
Usp4-201ENSMUST00000035237 Herc1E9PZP8 4859 aa6.01□□□□□ -1.45
Usp4-201ENSMUST00000035237 Krtap19-9bQ99NG9 58 aa5.95□□□□□ -1.46
Usp4-201ENSMUST00000035237 4932415D10RikA0A1W2P6U8 4986 aa5.92□□□□□ -1.46
Usp4-201ENSMUST00000035237 Krtap8-1O08633 61 aa5.9□□□□□ -1.47
Usp4-201ENSMUST00000035237 2310046K23RikA0A0A6YVW6 87 aa5.87□□□□□ -1.47
Usp4-201ENSMUST00000035237 Krtap1-3A2A588 173 aa5.84□□□□□ -1.47
Usp4-201ENSMUST00000035237 Krtap17-1A2A5X6 109 aa5.81□□□□□ -1.48
Usp4-201ENSMUST00000035237 Ush2AQ2QI47 5193 aa5.8□□□□□ -1.48
Usp4-201ENSMUST00000035237 Hmcn2A2AJ76 5100 aa5.79□□□□□ -1.48
Usp4-201ENSMUST00000035237 Rnf213E9Q555 5152 aaKnown RBP5.76□□□□□ -1.49
Usp4-201ENSMUST00000035237 Krtap9-5A2A5X3 358 aa5.71□□□□□ -1.49
Usp4-201ENSMUST00000035237 Krtap9-3Q3V2C1 136 aa5.71□□□□□ -1.5
Usp4-201ENSMUST00000035237 Lce1iQ9D6P5 149 aa5.69□□□□□ -1.5
Usp4-201ENSMUST00000035237 4933428G20RikQ9D3X4 101 aa5.67□□□□□ -1.5
Usp4-201ENSMUST00000035237 Lce1a2Q9D1K4 149 aa5.66□□□□□ -1.5
Usp4-201ENSMUST00000035237 Lce1mQ9CR91 182 aa5.64□□□□□ -1.51
Usp4-201ENSMUST00000035237 Krtap19-2Q925I0 141 aa5.63□□□□□ -1.51
Usp4-201ENSMUST00000035237 Gm18596A0A1W2P860 280 aa5.6□□□□□ -1.51
Usp4-201ENSMUST00000035237 Lce1hQ9D6R3 140 aa5.6□□□□□ -1.51
Usp4-201ENSMUST00000035237 Mt2P02798 61 aa5.44□□□□□ -1.54
Usp4-201ENSMUST00000035237 Lce1dQ9D731 133 aa5.41□□□□□ -1.54
Usp4-201ENSMUST00000035237 Gm6358A0A087WPH4 74 aa5.39□□□□□ -1.55
Usp4-201ENSMUST00000035237 Gm9789Q8BIG3 52 aa5.36□□□□□ -1.55
Usp4-201ENSMUST00000035237 Gm10272F7CZ33 110 aa5.34□□□□□ -1.55
Usp4-201ENSMUST00000035237 Mdn1A2ANY6 5589 aaKnown RBP5.28□□□□□ -1.56
Usp4-201ENSMUST00000035237 Sprr2gO70558 76 aa5.26□□□□□ -1.57
Usp4-201ENSMUST00000035237 Gm7735D3YX18 52 aa5.25□□□□□ -1.57
Usp4-201ENSMUST00000035237 Prm1P02319 51 aa5.23□□□□□ -1.57
Usp4-201ENSMUST00000035237 SspoQ8CG65 4998 aa5.2□□□□□ -1.58
Usp4-201ENSMUST00000035237 Lce1eQ9D139 143 aa5.17□□□□□ -1.58
Usp4-201ENSMUST00000035237 Gm10100J3QK64 120 aa5.17□□□□□ -1.58
Usp4-201ENSMUST00000035237 Gm11938Q9D3H4 131 aa5.17□□□□□ -1.58
Usp4-201ENSMUST00000035237 Krtap22-2J3QNX6 67 aa5.11□□□□□ -1.59
Usp4-201ENSMUST00000035237 Lce3bQ9CQM7 98 aa5.07□□□□□ -1.6
Usp4-201ENSMUST00000035237 Gm10061D3Z714 54 aa5.06□□□□□ -1.6
Usp4-201ENSMUST00000035237 Gm10142J3KMP7 120 aa5.02□□□□□ -1.61
Usp4-201ENSMUST00000035237 Sprr2dO70555 85 aa5.02□□□□□ -1.61
Usp4-201ENSMUST00000035237 Syne1Q6ZWR6 8799 aa5.01□□□□□ -1.61
Usp4-201ENSMUST00000035237 Muc5bE9Q5I3 4800 aa4.99□□□□□ -1.61
Usp4-201ENSMUST00000035237 Lce1cQ9D1C5 147 aa4.99□□□□□ -1.61
Usp4-201ENSMUST00000035237 Lce3cQ91V05 98 aa4.91□□□□□ -1.62
Usp4-201ENSMUST00000035237 Lce3dE9Q8V1 98 aa4.85□□□□□ -1.63
Usp4-201ENSMUST00000035237 Lce1fB9EJP6 147 aa4.8□□□□□ -1.64
Usp4-201ENSMUST00000035237 Lce1a1Q9CQH5 143 aa4.8□□□□□ -1.64
Usp4-201ENSMUST00000035237 Krtap19-4Q925H7 84 aa4.78□□□□□ -1.64
Usp4-201ENSMUST00000035237 Gm11562A0PK51 136 aa4.75□□□□□ -1.65
Usp4-201ENSMUST00000035237 Lce3eF8VQJ0 98 aa4.74□□□□□ -1.65
Usp4-201ENSMUST00000035237 Lce3fQ6PAI4 98 aa4.74□□□□□ -1.65
Usp4-201ENSMUST00000035237 Gm11569B1AQB1 180 aa4.71□□□□□ -1.66
Usp4-201ENSMUST00000035237 Lce3aQ497I5 98 aa4.67□□□□□ -1.66
Usp4-201ENSMUST00000035237 Muc16A0A140LJ72 8478 aa4.65□□□□□ -1.67
Usp4-201ENSMUST00000035237 Sprr2iO70560 76 aa4.62□□□□□ -1.67
Usp4-201ENSMUST00000035237 Krtap31-1Q9D644 177 aa4.55□□□□□ -1.68
Usp4-201ENSMUST00000035237 Sprr2hO70559 108 aa4.52□□□□□ -1.69
Retrieved 100 of 22,080 RNA–protein pairs in 71.7 ms