RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 ApobE9Q414 4505 aa7.68□□□□□ -1.18
Ebf3-201ENSMUST00000033378 Lrp1bQ9JI18 4599 aa7.67□□□□□ -1.18
Ebf3-201ENSMUST00000033378 Dnah2P0C6F1 4456 aa7.62□□□□□ -1.19
Ebf3-201ENSMUST00000033378 Dync2h1Q45VK7 4306 aa7.59□□□□□ -1.19
Ebf3-201ENSMUST00000033378 SacsQ9JLC8 4582 aa7.57□□□□□ -1.2
Ebf3-201ENSMUST00000033378 Krtap19-9bQ99NG9 58 aa7.55□□□□□ -1.2
Ebf3-201ENSMUST00000033378 LorP18165 486 aa7.55□□□□□ -1.2
Ebf3-201ENSMUST00000033378 Gm6358A0A087WPH4 74 aa7.55□□□□□ -1.2
Ebf3-201ENSMUST00000033378 Mycbp2Q7TPH6 4711 aa7.51□□□□□ -1.21
Ebf3-201ENSMUST00000033378 Krtap12-1Q9Z287 130 aa7.51□□□□□ -1.21
Ebf3-201ENSMUST00000033378 Ryr1E9PZQ0 5035 aa7.49□□□□□ -1.21
Ebf3-201ENSMUST00000033378 Dync1h1Q9JHU4 4644 aaKnown RBP7.48□□□□□ -1.21
Ebf3-201ENSMUST00000033378 Kmt2aP55200 3966 aa7.39□□□□□ -1.23
Ebf3-201ENSMUST00000033378 TnxbO35452 4006 aa7.37□□□□□ -1.23
Ebf3-201ENSMUST00000033378 PrkdcP97313 4128 aa7.36□□□□□ -1.23
Ebf3-201ENSMUST00000033378 Dnah3Q8BW94 4083 aa7.33□□□□□ -1.24
Ebf3-201ENSMUST00000033378 Dnah6E9Q0B6 4144 aa7.32□□□□□ -1.24
Ebf3-201ENSMUST00000033378 Lrp1Q91ZX7 4545 aaKnown RBP7.32□□□□□ -1.24
Ebf3-201ENSMUST00000033378 Hectd4E9Q2E4 4418 aa7.32□□□□□ -1.24
Ebf3-201ENSMUST00000033378 Krtap8-1O08633 61 aa7.29□□□□□ -1.24
Ebf3-201ENSMUST00000033378 Dnah1E9Q8T7 4250 aa7.28□□□□□ -1.24
Ebf3-201ENSMUST00000033378 Krtap16-3Q8C1I6 86 aa7.23□□□□□ -1.25
Ebf3-201ENSMUST00000033378 Gm18596A0A1W2P860 280 aa7.2□□□□□ -1.26
Ebf3-201ENSMUST00000033378 Fat3Q8BNA6 4555 aa7.18□□□□□ -1.26
Ebf3-201ENSMUST00000033378 Fat1A0A1L1SQU7 4645 aa7.17□□□□□ -1.26
Ebf3-201ENSMUST00000033378 Krtap19-3Q925H6 87 aa7.16□□□□□ -1.26
Ebf3-201ENSMUST00000033378 Dnah8Q91XQ0 4731 aa7.16□□□□□ -1.26
Ebf3-201ENSMUST00000033378 HydinQ80W93 5154 aa7.15□□□□□ -1.27
Ebf3-201ENSMUST00000033378 Ryr3A2AGL3 4863 aa7.14□□□□□ -1.27
Ebf3-201ENSMUST00000033378 Vps13bQ80TY5 3993 aa7.12□□□□□ -1.27
Ebf3-201ENSMUST00000033378 Krtap19-1Q925H2 87 aa7.06□□□□□ -1.28
Ebf3-201ENSMUST00000033378 Pkd1O08852 4293 aa7.02□□□□□ -1.29
Ebf3-201ENSMUST00000033378 Kiaa1109A2AAE1 5005 aa7□□□□□ -1.29
Ebf3-201ENSMUST00000033378 Lrp2A2ARV4 4660 aa6.94□□□□□ -1.3
Ebf3-201ENSMUST00000033378 Krtap9-5A2A5X3 358 aa6.93□□□□□ -1.3
Ebf3-201ENSMUST00000033378 Dnah7cA0A087WR13 4024 aa6.93□□□□□ -1.3
Ebf3-201ENSMUST00000033378 2310046K23RikA0A0A6YVW6 87 aa6.92□□□□□ -1.3
Ebf3-201ENSMUST00000033378 Herc2Q4U2R1 4836 aa6.89□□□□□ -1.31
Ebf3-201ENSMUST00000033378 Fras1Q80T14 4010 aa6.88□□□□□ -1.31
Ebf3-201ENSMUST00000033378 Dnah7aE9Q0T8 4024 aa6.82□□□□□ -1.32
Ebf3-201ENSMUST00000033378 Ryr2E9Q401 4966 aaKnown RBP6.81□□□□□ -1.32
Ebf3-201ENSMUST00000033378 Lce1mQ9CR91 182 aa6.8□□□□□ -1.32
Ebf3-201ENSMUST00000033378 Fat2Q5F226 4351 aa6.79□□□□□ -1.32
Ebf3-201ENSMUST00000033378 Gm10100J3QK64 120 aa6.74□□□□□ -1.33
Ebf3-201ENSMUST00000033378 Sprr2kO70562 68 aa6.73□□□□□ -1.33
Ebf3-201ENSMUST00000033378 Kmt2cQ8BRH4 4903 aa6.72□□□□□ -1.33
Ebf3-201ENSMUST00000033378 Gm10272F7CZ33 110 aa6.71□□□□□ -1.33
Ebf3-201ENSMUST00000033378 Lce1jD3YUU5 139 aa6.69□□□□□ -1.34
Ebf3-201ENSMUST00000033378 Mt2P02798 61 aa6.62□□□□□ -1.35
Ebf3-201ENSMUST00000033378 Lce3bQ9CQM7 98 aa6.59□□□□□ -1.36
Ebf3-201ENSMUST00000033378 Krtap19-2Q925I0 141 aa6.57□□□□□ -1.36
Ebf3-201ENSMUST00000033378 PcloQ9QYX7 5068 aa6.55□□□□□ -1.36
Ebf3-201ENSMUST00000033378 Gm10142J3KMP7 120 aa6.54□□□□□ -1.36
Ebf3-201ENSMUST00000033378 Lce3cQ91V05 98 aa6.53□□□□□ -1.36
Ebf3-201ENSMUST00000033378 Krtap1-3A2A588 173 aa6.52□□□□□ -1.37
Ebf3-201ENSMUST00000033378 Krtap22-2J3QNX6 67 aa6.52□□□□□ -1.37
Ebf3-201ENSMUST00000033378 Dnhd1D3Z2X2 4750 aa6.48□□□□□ -1.37
Ebf3-201ENSMUST00000033378 Prm1P02319 51 aa6.46□□□□□ -1.38
Ebf3-201ENSMUST00000033378 Lce3eF8VQJ0 98 aa6.38□□□□□ -1.39
Ebf3-201ENSMUST00000033378 Lce3fQ6PAI4 98 aa6.38□□□□□ -1.39
Ebf3-201ENSMUST00000033378 Pkhd1E9PZ36 4059 aa6.36□□□□□ -1.39
Ebf3-201ENSMUST00000033378 Syne1Q6ZWR6 8799 aa6.32□□□□□ -1.4
Ebf3-201ENSMUST00000033378 Abca13Q5SSE9 5034 aa6.31□□□□□ -1.4
Ebf3-201ENSMUST00000033378 Sprr2gO70558 76 aa6.28□□□□□ -1.4
Ebf3-201ENSMUST00000033378 Gm7735D3YX18 52 aa6.28□□□□□ -1.4
Ebf3-201ENSMUST00000033378 Pkhd1l1Q80ZA4 4249 aa6.26□□□□□ -1.41
Ebf3-201ENSMUST00000033378 Mdn1A2ANY6 5589 aaKnown RBP6.24□□□□□ -1.41
Ebf3-201ENSMUST00000033378 Lce3dE9Q8V1 98 aa6.24□□□□□ -1.41
Ebf3-201ENSMUST00000033378 Birc6O88738 4882 aa6.24□□□□□ -1.41
Ebf3-201ENSMUST00000033378 Krtap9-3Q3V2C1 136 aa6.22□□□□□ -1.41
Ebf3-201ENSMUST00000033378 Gm9789Q8BIG3 52 aa6.19□□□□□ -1.42
Ebf3-201ENSMUST00000033378 Lce3aQ497I5 98 aa6.18□□□□□ -1.42
Ebf3-201ENSMUST00000033378 Herc1E9PZP8 4859 aa6.15□□□□□ -1.43
Ebf3-201ENSMUST00000033378 Lce1iQ9D6P5 149 aa6.15□□□□□ -1.43
Ebf3-201ENSMUST00000033378 Gm38119A0A0A6YX29 146 aa6.09□□□□□ -1.44
Ebf3-201ENSMUST00000033378 Ubr4A2AN08 5180 aa6.08□□□□□ -1.44
Ebf3-201ENSMUST00000033378 Lce1a2Q9D1K4 149 aa6.06□□□□□ -1.44
Ebf3-201ENSMUST00000033378 Gm10061D3Z714 54 aa6.04□□□□□ -1.44
Ebf3-201ENSMUST00000033378 Krtap19-4Q925H7 84 aa5.99□□□□□ -1.45
Ebf3-201ENSMUST00000033378 Lce1gQ9D195 139 aa5.97□□□□□ -1.45
Ebf3-201ENSMUST00000033378 Lce1hQ9D6R3 140 aa5.97□□□□□ -1.45
Ebf3-201ENSMUST00000033378 Sprr2iO70560 76 aa5.9□□□□□ -1.46
Ebf3-201ENSMUST00000033378 Lce1fB9EJP6 147 aa5.88□□□□□ -1.47
Ebf3-201ENSMUST00000033378 Lce1cQ9D1C5 147 aa5.88□□□□□ -1.47
Ebf3-201ENSMUST00000033378 Lce1lQ9D1G7 135 aa5.88□□□□□ -1.47
Ebf3-201ENSMUST00000033378 Lce1dQ9D731 133 aa5.88□□□□□ -1.47
Ebf3-201ENSMUST00000033378 4932415D10RikA0A1W2P6U8 4986 aa5.88□□□□□ -1.47
Ebf3-201ENSMUST00000033378 Lce1bQ9D149 137 aa5.85□□□□□ -1.47
Ebf3-201ENSMUST00000033378 Krtap17-1A2A5X6 109 aa5.83□□□□□ -1.48
Ebf3-201ENSMUST00000033378 Gm10024A0A0A0MQA4 119 aa5.82□□□□□ -1.48
Ebf3-201ENSMUST00000033378 Lce1eQ9D139 143 aa5.82□□□□□ -1.48
Ebf3-201ENSMUST00000033378 Fat4Q2PZL6 4981 aa5.81□□□□□ -1.48
Ebf3-201ENSMUST00000033378 Hmcn2A2AJ76 5100 aa5.8□□□□□ -1.48
Ebf3-201ENSMUST00000033378 Gm11569B1AQB1 180 aa5.8□□□□□ -1.48
Ebf3-201ENSMUST00000033378 ZanO88799 5376 aa5.74□□□□□ -1.49
Ebf3-201ENSMUST00000033378 Rnf213E9Q555 5152 aaKnown RBP5.71□□□□□ -1.5
Ebf3-201ENSMUST00000033378 Sprr2dO70555 85 aa5.71□□□□□ -1.5
Ebf3-201ENSMUST00000033378 Gm11938Q9D3H4 131 aa5.7□□□□□ -1.5
Ebf3-201ENSMUST00000033378 Muc16A0A140LJ72 8478 aa5.6□□□□□ -1.51
Ebf3-201ENSMUST00000033378 Sprr2eO70556 76 aa5.6□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms