RNA–Protein interactions for RNA: ENSMUST00000031377.8

Scarb2-201, Transcript of Lysosome membrane protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scarb2, Length 4,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb2-201ENSMUST00000031377 Gm17402F6Z0L5 76 aa6.34□□□□□ -1.39
Scarb2-201ENSMUST00000031377 Tnp1P10856 55 aa6.34□□□□□ -1.39
Scarb2-201ENSMUST00000031377 Dnah7cA0A087WR13 4024 aa6.29□□□□□ -1.4
Scarb2-201ENSMUST00000031377 Ryr1E9PZQ0 5035 aa6.28□□□□□ -1.4
Scarb2-201ENSMUST00000031377 Dync1h1Q9JHU4 4644 aaKnown RBP6.26□□□□□ -1.41
Scarb2-201ENSMUST00000031377 Lrp1Q91ZX7 4545 aaKnown RBP6.24□□□□□ -1.41
Scarb2-201ENSMUST00000031377 Ryr3A2AGL3 4863 aa6.22□□□□□ -1.41
Scarb2-201ENSMUST00000031377 SacsQ9JLC8 4582 aa6.2□□□□□ -1.42
Scarb2-201ENSMUST00000031377 Mycbp2Q7TPH6 4711 aa6.18□□□□□ -1.42
Scarb2-201ENSMUST00000031377 Dnah7aE9Q0T8 4024 aa6.18□□□□□ -1.42
Scarb2-201ENSMUST00000031377 Fras1Q80T14 4010 aa6.16□□□□□ -1.42
Scarb2-201ENSMUST00000031377 Vps13bQ80TY5 3993 aa6.16□□□□□ -1.42
Scarb2-201ENSMUST00000031377 Fat3Q8BNA6 4555 aa6.12□□□□□ -1.43
Scarb2-201ENSMUST00000031377 Fat1A0A1L1SQU7 4645 aa6.11□□□□□ -1.43
Scarb2-201ENSMUST00000031377 Gm19668J3QMD1 248 aa6.09□□□□□ -1.43
Scarb2-201ENSMUST00000031377 Gm19402J3QJV4 266 aa6.06□□□□□ -1.44
Scarb2-201ENSMUST00000031377 Krtap7-1Q9D3I6 87 aa6.05□□□□□ -1.44
Scarb2-201ENSMUST00000031377 Krtap1-5A2A590 122 aa6.01□□□□□ -1.45
Scarb2-201ENSMUST00000031377 Pkd1O08852 4293 aa5.98□□□□□ -1.45
Scarb2-201ENSMUST00000031377 HydinQ80W93 5154 aa5.98□□□□□ -1.45
Scarb2-201ENSMUST00000031377 Sprr2a3Q4KL71 83 aa5.97□□□□□ -1.45
Scarb2-201ENSMUST00000031377 Sprr2a1Q9CQK8 83 aa5.97□□□□□ -1.45
Scarb2-201ENSMUST00000031377 Fat2Q5F226 4351 aa5.92□□□□□ -1.46
Scarb2-201ENSMUST00000031377 Kiaa1109A2AAE1 5005 aa5.91□□□□□ -1.46
Scarb2-201ENSMUST00000031377 Lrp2A2ARV4 4660 aa5.85□□□□□ -1.47
Scarb2-201ENSMUST00000031377 Herc2Q4U2R1 4836 aa5.81□□□□□ -1.48
Scarb2-201ENSMUST00000031377 Krtap1-4Q3V2D6 188 aa5.8□□□□□ -1.48
Scarb2-201ENSMUST00000031377 Dnah8Q91XQ0 4731 aa5.74□□□□□ -1.49
Scarb2-201ENSMUST00000031377 LorP18165 486 aa5.72□□□□□ -1.49
Scarb2-201ENSMUST00000031377 Ryr2E9Q401 4966 aaKnown RBP5.68□□□□□ -1.5
Scarb2-201ENSMUST00000031377 Abca13Q5SSE9 5034 aa5.68□□□□□ -1.5
Scarb2-201ENSMUST00000031377 Krtap16-3Q8C1I6 86 aa5.67□□□□□ -1.5
Scarb2-201ENSMUST00000031377 Krtap19-9aF8WH65 55 aa5.65□□□□□ -1.5
Scarb2-201ENSMUST00000031377 Pkhd1l1Q80ZA4 4249 aa5.62□□□□□ -1.51
Scarb2-201ENSMUST00000031377 Krtap19-3Q925H6 87 aa5.59□□□□□ -1.51
Scarb2-201ENSMUST00000031377 Krtap12-1Q9Z287 130 aa5.58□□□□□ -1.52
Scarb2-201ENSMUST00000031377 Gm18596A0A1W2P860 280 aa5.58□□□□□ -1.52
Scarb2-201ENSMUST00000031377 Kmt2cQ8BRH4 4903 aa5.57□□□□□ -1.52
Scarb2-201ENSMUST00000031377 Krtap19-1Q925H2 87 aa5.54□□□□□ -1.52
Scarb2-201ENSMUST00000031377 Pkhd1E9PZ36 4059 aa5.51□□□□□ -1.53
Scarb2-201ENSMUST00000031377 4933428G20RikQ9D3X4 101 aa5.5□□□□□ -1.53
Scarb2-201ENSMUST00000031377 Dnhd1D3Z2X2 4750 aa5.46□□□□□ -1.53
Scarb2-201ENSMUST00000031377 Krtap19-9bQ99NG9 58 aa5.42□□□□□ -1.54
Scarb2-201ENSMUST00000031377 Lce1mQ9CR91 182 aa5.4□□□□□ -1.55
Scarb2-201ENSMUST00000031377 Birc6O88738 4882 aa5.3□□□□□ -1.56
Scarb2-201ENSMUST00000031377 Lce1jD3YUU5 139 aa5.3□□□□□ -1.56
Scarb2-201ENSMUST00000031377 PcloQ9QYX7 5068 aa5.29□□□□□ -1.56
Scarb2-201ENSMUST00000031377 Gm6358A0A087WPH4 74 aa5.28□□□□□ -1.56
Scarb2-201ENSMUST00000031377 Herc1E9PZP8 4859 aa5.25□□□□□ -1.57
Scarb2-201ENSMUST00000031377 Krtap9-5A2A5X3 358 aa5.24□□□□□ -1.57
Scarb2-201ENSMUST00000031377 Krtap8-1O08633 61 aa5.2□□□□□ -1.58
Scarb2-201ENSMUST00000031377 Krtap1-3A2A588 173 aa5.19□□□□□ -1.58
Scarb2-201ENSMUST00000031377 Ubr4A2AN08 5180 aa5.15□□□□□ -1.59
Scarb2-201ENSMUST00000031377 Krtap19-2Q925I0 141 aa5.06□□□□□ -1.6
Scarb2-201ENSMUST00000031377 2310046K23RikA0A0A6YVW6 87 aa5.04□□□□□ -1.6
Scarb2-201ENSMUST00000031377 ZanO88799 5376 aa5.01□□□□□ -1.61
Scarb2-201ENSMUST00000031377 Prm1P02319 51 aa4.99□□□□□ -1.61
Scarb2-201ENSMUST00000031377 4932415D10RikA0A1W2P6U8 4986 aa4.98□□□□□ -1.61
Scarb2-201ENSMUST00000031377 Gm7735D3YX18 52 aa4.97□□□□□ -1.61
Scarb2-201ENSMUST00000031377 Mdn1A2ANY6 5589 aaKnown RBP4.97□□□□□ -1.61
Scarb2-201ENSMUST00000031377 Mt2P02798 61 aa4.97□□□□□ -1.61
Scarb2-201ENSMUST00000031377 Fat4Q2PZL6 4981 aa4.97□□□□□ -1.61
Scarb2-201ENSMUST00000031377 Ush2AQ2QI47 5193 aa4.93□□□□□ -1.62
Scarb2-201ENSMUST00000031377 Krtap17-1A2A5X6 109 aa4.9□□□□□ -1.62
Scarb2-201ENSMUST00000031377 Gm9789Q8BIG3 52 aa4.9□□□□□ -1.62
Scarb2-201ENSMUST00000031377 Gm10272F7CZ33 110 aa4.9□□□□□ -1.63
Scarb2-201ENSMUST00000031377 Lce1iQ9D6P5 149 aa4.88□□□□□ -1.63
Scarb2-201ENSMUST00000031377 Lce1a2Q9D1K4 149 aa4.84□□□□□ -1.63
Scarb2-201ENSMUST00000031377 Hmcn2A2AJ76 5100 aa4.84□□□□□ -1.64
Scarb2-201ENSMUST00000031377 Rnf213E9Q555 5152 aaKnown RBP4.8□□□□□ -1.64
Scarb2-201ENSMUST00000031377 Krtap22-2J3QNX6 67 aa4.78□□□□□ -1.64
Scarb2-201ENSMUST00000031377 Sprr2kO70562 68 aa4.77□□□□□ -1.65
Scarb2-201ENSMUST00000031377 Gm10100J3QK64 120 aa4.75□□□□□ -1.65
Scarb2-201ENSMUST00000031377 Krtap9-3Q3V2C1 136 aa4.75□□□□□ -1.65
Scarb2-201ENSMUST00000031377 Syne1Q6ZWR6 8799 aa4.72□□□□□ -1.65
Scarb2-201ENSMUST00000031377 Gm10061D3Z714 54 aa4.69□□□□□ -1.66
Scarb2-201ENSMUST00000031377 Lce1hQ9D6R3 140 aa4.69□□□□□ -1.66
Scarb2-201ENSMUST00000031377 Lce3bQ9CQM7 98 aa4.67□□□□□ -1.66
Scarb2-201ENSMUST00000031377 Gm10142J3KMP7 120 aa4.6□□□□□ -1.67
Scarb2-201ENSMUST00000031377 Lce3cQ91V05 98 aa4.57□□□□□ -1.68
Scarb2-201ENSMUST00000031377 Sprr2gO70558 76 aa4.53□□□□□ -1.68
Scarb2-201ENSMUST00000031377 Gm11569B1AQB1 180 aa4.5□□□□□ -1.69
Scarb2-201ENSMUST00000031377 Lce3eF8VQJ0 98 aa4.49□□□□□ -1.69
Scarb2-201ENSMUST00000031377 Lce3fQ6PAI4 98 aa4.49□□□□□ -1.69
Scarb2-201ENSMUST00000031377 Gm38119A0A0A6YX29 146 aa4.45□□□□□ -1.7
Scarb2-201ENSMUST00000031377 Lce3dE9Q8V1 98 aa4.43□□□□□ -1.7
Scarb2-201ENSMUST00000031377 Lce1dQ9D731 133 aa4.39□□□□□ -1.71
Scarb2-201ENSMUST00000031377 Lce3aQ497I5 98 aa4.31□□□□□ -1.72
Scarb2-201ENSMUST00000031377 Fsip2A2ARZ3 6995 aa4.31□□□□□ -1.72
Scarb2-201ENSMUST00000031377 Muc5bE9Q5I3 4800 aa4.31□□□□□ -1.72
Scarb2-201ENSMUST00000031377 Gm11938Q9D3H4 131 aa4.31□□□□□ -1.72
Scarb2-201ENSMUST00000031377 Krtap19-4Q925H7 84 aa4.28□□□□□ -1.72
Scarb2-201ENSMUST00000031377 Muc16A0A140LJ72 8478 aa4.28□□□□□ -1.72
Scarb2-201ENSMUST00000031377 Krtap4-6Q3V4B7 195 aa4.26□□□□□ -1.73
Scarb2-201ENSMUST00000031377 Sprr2dO70555 85 aa4.25□□□□□ -1.73
Scarb2-201ENSMUST00000031377 Krtap4-2B1AQ85 167 aa4.24□□□□□ -1.73
Scarb2-201ENSMUST00000031377 Lce1gQ9D195 139 aa4.24□□□□□ -1.73
Scarb2-201ENSMUST00000031377 SspoQ8CG65 4998 aa4.21□□□□□ -1.74
Scarb2-201ENSMUST00000031377 Lce1eQ9D139 143 aa4.19□□□□□ -1.74
Scarb2-201ENSMUST00000031377 Lce1fB9EJP6 147 aa4.19□□□□□ -1.74
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms