RNA–Protein interactions for RNA: ENSMUST00000029838.10

Rpf1-201, Transcript of Ribosome production factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rpf1, Length 1,661 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1-201ENSMUST00000029838 Defb1P56386 69 aa8.88□□□□□ -0.99
Rpf1-201ENSMUST00000029838 Sox16Q62247 57 aa8.85□□□□□ -0.99
Rpf1-201ENSMUST00000029838 Gm17416Q30KP4 66 aa8.85□□□□□ -0.99
Rpf1-201ENSMUST00000029838 Sec61bQ9CQS8 96 aaKnown RBP8.81□□□□□ -1
Rpf1-201ENSMUST00000029838 HydinQ80W93 5154 aa8.78□□□□□ -1
Rpf1-201ENSMUST00000029838 A0A1Y7VJ07 166 aa8.76□□□□□ -1.01
Rpf1-201ENSMUST00000029838 Cox6b2Q80ZN9 88 aa8.72□□□□□ -1.01
Rpf1-201ENSMUST00000029838 4933415A04RikQ9D443 101 aa8.7□□□□□ -1.02
Rpf1-201ENSMUST00000029838 Lrp2A2ARV4 4660 aa8.66□□□□□ -1.02
Rpf1-201ENSMUST00000029838 Sec61gP60060 68 aa8.62□□□□□ -1.03
Rpf1-201ENSMUST00000029838 Gm17606F6ZL36 78 aa8.61□□□□□ -1.03
Rpf1-201ENSMUST00000029838 A030014E15RikA0A1Y7VJV2 120 aa8.6□□□□□ -1.03
Rpf1-201ENSMUST00000029838 2210017I01RikA0A0A6YVV1 95 aa8.57□□□□□ -1.04
Rpf1-201ENSMUST00000029838 2310057N15RikQ9D6T8 200 aa8.56□□□□□ -1.04
Rpf1-201ENSMUST00000029838 PcloQ9QYX7 5068 aa8.53□□□□□ -1.04
Rpf1-201ENSMUST00000029838 Fam229aB2KGE5 128 aa8.45□□□□□ -1.06
Rpf1-201ENSMUST00000029838 Krtap3-1A2A591 98 aa8.43□□□□□ -1.06
Rpf1-201ENSMUST00000029838 Krtap13-1Q8K198 168 aa8.37□□□□□ -1.07
Rpf1-201ENSMUST00000029838 Gm10382Q3V0T5 144 aa8.35□□□□□ -1.07
Rpf1-201ENSMUST00000029838 Gm38119A0A0A6YX29 146 aa8.33□□□□□ -1.08
Rpf1-201ENSMUST00000029838 Gm9955Q8CEJ8 102 aa8.31□□□□□ -1.08
Rpf1-201ENSMUST00000029838 Herc1E9PZP8 4859 aa8.31□□□□□ -1.08
Rpf1-201ENSMUST00000029838 Gm18596A0A1W2P860 280 aa8.3□□□□□ -1.08
Rpf1-201ENSMUST00000029838 Gm3646F6S692 53 aa8.3□□□□□ -1.08
Rpf1-201ENSMUST00000029838 Krtap1-5A2A590 122 aa8.26□□□□□ -1.09
Rpf1-201ENSMUST00000029838 Krtap16-3Q8C1I6 86 aa8.24□□□□□ -1.09
Rpf1-201ENSMUST00000029838 BC029722A0A0N4SW31 51 aa8.23□□□□□ -1.09
Rpf1-201ENSMUST00000029838 Ndufs5Q99LY9 106 aa8.23□□□□□ -1.09
Rpf1-201ENSMUST00000029838 Prm1P02319 51 aa8.21□□□□□ -1.1
Rpf1-201ENSMUST00000029838 Gm20537G3UYK7 97 aa8.2□□□□□ -1.1
Rpf1-201ENSMUST00000029838 Gm9789Q8BIG3 52 aa8.18□□□□□ -1.1
Rpf1-201ENSMUST00000029838 Krtap19-1Q925H2 87 aa8.18□□□□□ -1.1
Rpf1-201ENSMUST00000029838 Crct1Q6PAI5 102 aa8.15□□□□□ -1.1
Rpf1-201ENSMUST00000029838 Krtap19-3Q925H6 87 aa8.14□□□□□ -1.11
Rpf1-201ENSMUST00000029838 Gm19668J3QMD1 248 aa8.11□□□□□ -1.11
Rpf1-201ENSMUST00000029838 1700042G07RikB1AUF7 90 aa8.1□□□□□ -1.11
Rpf1-201ENSMUST00000029838 Gm7735D3YX18 52 aa8.1□□□□□ -1.11
Rpf1-201ENSMUST00000029838 Ush2AQ2QI47 5193 aa8.08□□□□□ -1.12
Rpf1-201ENSMUST00000029838 Krtap1-3A2A588 173 aa8.05□□□□□ -1.12
Rpf1-201ENSMUST00000029838 Gm10318A0A1W2P728 225 aa8.03□□□□□ -1.12
Rpf1-201ENSMUST00000029838 Gm19426M0QWC7 77 aa8.02□□□□□ -1.13
Rpf1-201ENSMUST00000029838 Hmcn2A2AJ76 5100 aa8□□□□□ -1.13
Rpf1-201ENSMUST00000029838 A030003K21RikA0A1Y7VIM3 128 aa8□□□□□ -1.13
Rpf1-201ENSMUST00000029838 Pla2g10Q9QXX3 151 aa7.98□□□□□ -1.13
Rpf1-201ENSMUST00000029838 Gm3880A0A1B0GSB3 72 aa7.94□□□□□ -1.14
Rpf1-201ENSMUST00000029838 Lce1a1Q9CQH5 143 aa7.94□□□□□ -1.14
Rpf1-201ENSMUST00000029838 Lce1gQ9D195 139 aa7.94□□□□□ -1.14
Rpf1-201ENSMUST00000029838 Gm17402F6Z0L5 76 aa7.91□□□□□ -1.14
Rpf1-201ENSMUST00000029838 Lce1dQ9D731 133 aa7.91□□□□□ -1.14
Rpf1-201ENSMUST00000029838 Krtap1-4Q3V2D6 188 aa7.86□□□□□ -1.15
Rpf1-201ENSMUST00000029838 CriptO70333 101 aa7.84□□□□□ -1.15
Rpf1-201ENSMUST00000029838 4932415D10RikA0A1W2P6U8 4986 aa7.83□□□□□ -1.16
Rpf1-201ENSMUST00000029838 LorP18165 486 aa7.83□□□□□ -1.16
Rpf1-201ENSMUST00000029838 Ubr4A2AN08 5180 aa7.83□□□□□ -1.16
Rpf1-201ENSMUST00000029838 Spink7Q6IE32 76 aa7.82□□□□□ -1.16
Rpf1-201ENSMUST00000029838 B930094E09RikQ8C4T2 136 aa7.79□□□□□ -1.16
Rpf1-201ENSMUST00000029838 ZanO88799 5376 aa7.76□□□□□ -1.17
Rpf1-201ENSMUST00000029838 Gm12216A0A1W2P827 62 aa7.74□□□□□ -1.17
Rpf1-201ENSMUST00000029838 Sprr2a3Q4KL71 83 aa7.66□□□□□ -1.18
Rpf1-201ENSMUST00000029838 Sprr2a1Q9CQK8 83 aa7.66□□□□□ -1.18
Rpf1-201ENSMUST00000029838 Rnf213E9Q555 5152 aaKnown RBP7.65□□□□□ -1.18
Rpf1-201ENSMUST00000029838 Romo1P60603 79 aa7.63□□□□□ -1.19
Rpf1-201ENSMUST00000029838 Fat4Q2PZL6 4981 aa7.59□□□□□ -1.19
Rpf1-201ENSMUST00000029838 Gm6217A0A1Y7VJK9 128 aa7.55□□□□□ -1.2
Rpf1-201ENSMUST00000029838 Krtap12-1Q9Z287 130 aa7.53□□□□□ -1.2
Rpf1-201ENSMUST00000029838 A0A286YCP9 139 aa7.52□□□□□ -1.21
Rpf1-201ENSMUST00000029838 Krtap19-9aF8WH65 55 aa7.48□□□□□ -1.21
Rpf1-201ENSMUST00000029838 Lce1jD3YUU5 139 aa7.44□□□□□ -1.22
Rpf1-201ENSMUST00000029838 Lce1lQ9D1G7 135 aa7.4□□□□□ -1.23
Rpf1-201ENSMUST00000029838 Gm21887J3QQ04 176 aa7.37□□□□□ -1.23
Rpf1-201ENSMUST00000029838 SspoQ8CG65 4998 aa7.33□□□□□ -1.24
Rpf1-201ENSMUST00000029838 Gm10061D3Z714 54 aa7.32□□□□□ -1.24
Rpf1-201ENSMUST00000029838 Camk2n1Q6QWF9 78 aa7.3□□□□□ -1.24
Rpf1-201ENSMUST00000029838 Prm2P07978 107 aa7.28□□□□□ -1.24
Rpf1-201ENSMUST00000029838 Krtap19-2Q925I0 141 aa7.25□□□□□ -1.25
Rpf1-201ENSMUST00000029838 Krtap9-5A2A5X3 358 aa7.22□□□□□ -1.25
Rpf1-201ENSMUST00000029838 Krtap17-1A2A5X6 109 aa7.09□□□□□ -1.27
Rpf1-201ENSMUST00000029838 Lce1iQ9D6P5 149 aa7□□□□□ -1.29
Rpf1-201ENSMUST00000029838 Gm40193A0A1B0GT39 78 aa6.96□□□□□ -1.3
Rpf1-201ENSMUST00000029838 Gm11569B1AQB1 180 aa6.93□□□□□ -1.3
Rpf1-201ENSMUST00000029838 Lce1a2Q9D1K4 149 aa6.9□□□□□ -1.3
Rpf1-201ENSMUST00000029838 Muc5bE9Q5I3 4800 aa6.88□□□□□ -1.31
Rpf1-201ENSMUST00000029838 Krtap8-1O08633 61 aa6.87□□□□□ -1.31
Rpf1-201ENSMUST00000029838 Gm6358A0A087WPH4 74 aa6.85□□□□□ -1.31
Rpf1-201ENSMUST00000029838 Krtap7-1Q9D3I6 87 aa6.85□□□□□ -1.31
Rpf1-201ENSMUST00000029838 Krtap19-9bQ99NG9 58 aa6.84□□□□□ -1.32
Rpf1-201ENSMUST00000029838 Mp68P56379 58 aa6.83□□□□□ -1.32
Rpf1-201ENSMUST00000029838 Mt2P02798 61 aa6.72□□□□□ -1.33
Rpf1-201ENSMUST00000029838 Lce1hQ9D6R3 140 aa6.71□□□□□ -1.33
Rpf1-201ENSMUST00000029838 Gm20538F6Z9R1 75 aa6.71□□□□□ -1.34
Rpf1-201ENSMUST00000029838 Tnp1P10856 55 aa6.68□□□□□ -1.34
Rpf1-201ENSMUST00000029838 Krtap31-2Q8CAY5 177 aa6.61□□□□□ -1.35
Rpf1-201ENSMUST00000029838 Krtap22-2J3QNX6 67 aa6.4□□□□□ -1.38
Rpf1-201ENSMUST00000029838 Krtap4-6Q3V4B7 195 aa6.29□□□□□ -1.4
Rpf1-201ENSMUST00000029838 Krtap9-3Q3V2C1 136 aa6.26□□□□□ -1.41
Rpf1-201ENSMUST00000029838 Ndufaf8A2AMZ4 74 aa6.26□□□□□ -1.41
Rpf1-201ENSMUST00000029838 2310046K23RikA0A0A6YVW6 87 aa6.23□□□□□ -1.41
Rpf1-201ENSMUST00000029838 Lce1bQ9D149 137 aa6.21□□□□□ -1.42
Rpf1-201ENSMUST00000029838 Mdn1A2ANY6 5589 aaKnown RBP6.19□□□□□ -1.42
Rpf1-201ENSMUST00000029838 Gm11596B1AQB0 205 aa6.17□□□□□ -1.42
Retrieved 100 of 22,080 RNA–protein pairs in 49.3 ms