RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Dnah2P0C6F1 4456 aa7.09□□□□□ -1.27
Col17a1-201ENSMUST00000026045 Dnah3Q8BW94 4083 aa7.07□□□□□ -1.28
Col17a1-201ENSMUST00000026045 Dync1h1Q9JHU4 4644 aaKnown RBP7.06□□□□□ -1.28
Col17a1-201ENSMUST00000026045 PrkdcP97313 4128 aa7.04□□□□□ -1.28
Col17a1-201ENSMUST00000026045 Lrp1bQ9JI18 4599 aa7.02□□□□□ -1.28
Col17a1-201ENSMUST00000026045 Dnah6E9Q0B6 4144 aa7.02□□□□□ -1.29
Col17a1-201ENSMUST00000026045 Kmt2aP55200 3966 aa7.02□□□□□ -1.29
Col17a1-201ENSMUST00000026045 Gm19402J3QJV4 266 aa7.01□□□□□ -1.29
Col17a1-201ENSMUST00000026045 Krtap1-4Q3V2D6 188 aa6.96□□□□□ -1.29
Col17a1-201ENSMUST00000026045 Dnah1E9Q8T7 4250 aa6.94□□□□□ -1.3
Col17a1-201ENSMUST00000026045 SacsQ9JLC8 4582 aa6.94□□□□□ -1.3
Col17a1-201ENSMUST00000026045 Krtap19-9aF8WH65 55 aa6.92□□□□□ -1.3
Col17a1-201ENSMUST00000026045 LorP18165 486 aa6.91□□□□□ -1.3
Col17a1-201ENSMUST00000026045 Mycbp2Q7TPH6 4711 aa6.85□□□□□ -1.31
Col17a1-201ENSMUST00000026045 Gm18596A0A1W2P860 280 aa6.83□□□□□ -1.32
Col17a1-201ENSMUST00000026045 Ryr1E9PZQ0 5035 aa6.81□□□□□ -1.32
Col17a1-201ENSMUST00000026045 Hectd4E9Q2E4 4418 aa6.8□□□□□ -1.32
Col17a1-201ENSMUST00000026045 Pkd1O08852 4293 aa6.77□□□□□ -1.33
Col17a1-201ENSMUST00000026045 Gm6358A0A087WPH4 74 aa6.73□□□□□ -1.33
Col17a1-201ENSMUST00000026045 Krtap12-1Q9Z287 130 aa6.73□□□□□ -1.33
Col17a1-201ENSMUST00000026045 Ryr3A2AGL3 4863 aa6.71□□□□□ -1.34
Col17a1-201ENSMUST00000026045 Krtap19-9bQ99NG9 58 aa6.7□□□□□ -1.34
Col17a1-201ENSMUST00000026045 Fat1A0A1L1SQU7 4645 aa6.68□□□□□ -1.34
Col17a1-201ENSMUST00000026045 Lrp1Q91ZX7 4545 aaKnown RBP6.66□□□□□ -1.34
Col17a1-201ENSMUST00000026045 Fat3Q8BNA6 4555 aa6.63□□□□□ -1.35
Col17a1-201ENSMUST00000026045 Dnah7cA0A087WR13 4024 aa6.61□□□□□ -1.35
Col17a1-201ENSMUST00000026045 Krtap16-3Q8C1I6 86 aa6.58□□□□□ -1.36
Col17a1-201ENSMUST00000026045 Krtap8-1O08633 61 aa6.56□□□□□ -1.36
Col17a1-201ENSMUST00000026045 Krtap19-3Q925H6 87 aa6.52□□□□□ -1.37
Col17a1-201ENSMUST00000026045 Dnah7aE9Q0T8 4024 aa6.52□□□□□ -1.37
Col17a1-201ENSMUST00000026045 Dnah8Q91XQ0 4731 aa6.51□□□□□ -1.37
Col17a1-201ENSMUST00000026045 Vps13bQ80TY5 3993 aa6.51□□□□□ -1.37
Col17a1-201ENSMUST00000026045 Lce1mQ9CR91 182 aa6.48□□□□□ -1.37
Col17a1-201ENSMUST00000026045 Fat2Q5F226 4351 aa6.46□□□□□ -1.37
Col17a1-201ENSMUST00000026045 Fras1Q80T14 4010 aa6.44□□□□□ -1.38
Col17a1-201ENSMUST00000026045 Krtap19-1Q925H2 87 aa6.42□□□□□ -1.38
Col17a1-201ENSMUST00000026045 Herc2Q4U2R1 4836 aa6.41□□□□□ -1.38
Col17a1-201ENSMUST00000026045 Kiaa1109A2AAE1 5005 aa6.41□□□□□ -1.38
Col17a1-201ENSMUST00000026045 HydinQ80W93 5154 aa6.41□□□□□ -1.38
Col17a1-201ENSMUST00000026045 Ryr2E9Q401 4966 aaKnown RBP6.4□□□□□ -1.38
Col17a1-201ENSMUST00000026045 2310046K23RikA0A0A6YVW6 87 aa6.39□□□□□ -1.39
Col17a1-201ENSMUST00000026045 Lrp2A2ARV4 4660 aa6.38□□□□□ -1.39
Col17a1-201ENSMUST00000026045 Krtap9-5A2A5X3 358 aa6.31□□□□□ -1.4
Col17a1-201ENSMUST00000026045 Gm10100J3QK64 120 aa6.24□□□□□ -1.41
Col17a1-201ENSMUST00000026045 Sprr2kO70562 68 aa6.14□□□□□ -1.43
Col17a1-201ENSMUST00000026045 Gm10272F7CZ33 110 aa6.13□□□□□ -1.43
Col17a1-201ENSMUST00000026045 Prm1P02319 51 aa6.1□□□□□ -1.43
Col17a1-201ENSMUST00000026045 Gm10142J3KMP7 120 aa6.1□□□□□ -1.43
Col17a1-201ENSMUST00000026045 Kmt2cQ8BRH4 4903 aa6.09□□□□□ -1.43
Col17a1-201ENSMUST00000026045 Krtap1-3A2A588 173 aa6.07□□□□□ -1.44
Col17a1-201ENSMUST00000026045 Lce1jD3YUU5 139 aa6.05□□□□□ -1.44
Col17a1-201ENSMUST00000026045 Lce3bQ9CQM7 98 aa6.01□□□□□ -1.45
Col17a1-201ENSMUST00000026045 Dnhd1D3Z2X2 4750 aa6□□□□□ -1.45
Col17a1-201ENSMUST00000026045 Krtap19-2Q925I0 141 aa5.98□□□□□ -1.45
Col17a1-201ENSMUST00000026045 Mt2P02798 61 aa5.97□□□□□ -1.45
Col17a1-201ENSMUST00000026045 Gm7735D3YX18 52 aa5.94□□□□□ -1.46
Col17a1-201ENSMUST00000026045 Pkhd1E9PZ36 4059 aa5.93□□□□□ -1.46
Col17a1-201ENSMUST00000026045 PcloQ9QYX7 5068 aa5.93□□□□□ -1.46
Col17a1-201ENSMUST00000026045 Abca13Q5SSE9 5034 aa5.92□□□□□ -1.46
Col17a1-201ENSMUST00000026045 Lce3cQ91V05 98 aa5.91□□□□□ -1.46
Col17a1-201ENSMUST00000026045 Birc6O88738 4882 aa5.91□□□□□ -1.46
Col17a1-201ENSMUST00000026045 Pkhd1l1Q80ZA4 4249 aa5.9□□□□□ -1.46
Col17a1-201ENSMUST00000026045 Gm9789Q8BIG3 52 aa5.88□□□□□ -1.47
Col17a1-201ENSMUST00000026045 Krtap22-2J3QNX6 67 aa5.85□□□□□ -1.47
Col17a1-201ENSMUST00000026045 Herc1E9PZP8 4859 aa5.78□□□□□ -1.48
Col17a1-201ENSMUST00000026045 Lce3dE9Q8V1 98 aa5.77□□□□□ -1.49
Col17a1-201ENSMUST00000026045 Sprr2gO70558 76 aa5.74□□□□□ -1.49
Col17a1-201ENSMUST00000026045 Lce3eF8VQJ0 98 aa5.74□□□□□ -1.49
Col17a1-201ENSMUST00000026045 Lce3fQ6PAI4 98 aa5.74□□□□□ -1.49
Col17a1-201ENSMUST00000026045 Krtap9-3Q3V2C1 136 aa5.68□□□□□ -1.5
Col17a1-201ENSMUST00000026045 Lce3aQ497I5 98 aa5.68□□□□□ -1.5
Col17a1-201ENSMUST00000026045 Gm10061D3Z714 54 aa5.66□□□□□ -1.5
Col17a1-201ENSMUST00000026045 Gm38119A0A0A6YX29 146 aa5.6□□□□□ -1.51
Col17a1-201ENSMUST00000026045 Lce1iQ9D6P5 149 aa5.58□□□□□ -1.52
Col17a1-201ENSMUST00000026045 Lce1a2Q9D1K4 149 aa5.51□□□□□ -1.53
Col17a1-201ENSMUST00000026045 Syne1Q6ZWR6 8799 aa5.49□□□□□ -1.53
Col17a1-201ENSMUST00000026045 Gm11569B1AQB1 180 aa5.49□□□□□ -1.53
Col17a1-201ENSMUST00000026045 Mdn1A2ANY6 5589 aaKnown RBP5.48□□□□□ -1.53
Col17a1-201ENSMUST00000026045 4932415D10RikA0A1W2P6U8 4986 aa5.46□□□□□ -1.54
Col17a1-201ENSMUST00000026045 Ubr4A2AN08 5180 aa5.46□□□□□ -1.54
Col17a1-201ENSMUST00000026045 Krtap19-4Q925H7 84 aa5.44□□□□□ -1.54
Col17a1-201ENSMUST00000026045 Krtap31-1Q9D644 177 aa5.43□□□□□ -1.54
Col17a1-201ENSMUST00000026045 Gm10024A0A0A0MQA4 119 aa5.42□□□□□ -1.54
Col17a1-201ENSMUST00000026045 Fat4Q2PZL6 4981 aa5.41□□□□□ -1.54
Col17a1-201ENSMUST00000026045 Sprr2iO70560 76 aa5.39□□□□□ -1.55
Col17a1-201ENSMUST00000026045 Krtap17-1A2A5X6 109 aa5.38□□□□□ -1.55
Col17a1-201ENSMUST00000026045 ZanO88799 5376 aa5.36□□□□□ -1.55
Col17a1-201ENSMUST00000026045 Lce1gQ9D195 139 aa5.33□□□□□ -1.56
Col17a1-201ENSMUST00000026045 Lce1hQ9D6R3 140 aa5.33□□□□□ -1.56
Col17a1-201ENSMUST00000026045 Sprr2fO70557 76 aa5.31□□□□□ -1.56
Col17a1-201ENSMUST00000026045 Lce1fB9EJP6 147 aa5.28□□□□□ -1.56
Col17a1-201ENSMUST00000026045 Lce1cQ9D1C5 147 aa5.28□□□□□ -1.56
Col17a1-201ENSMUST00000026045 Lce1lQ9D1G7 135 aa5.28□□□□□ -1.56
Col17a1-201ENSMUST00000026045 Lce1dQ9D731 133 aa5.28□□□□□ -1.56
Col17a1-201ENSMUST00000026045 Hmcn2A2AJ76 5100 aa5.28□□□□□ -1.56
Col17a1-201ENSMUST00000026045 Lce1bQ9D149 137 aa5.27□□□□□ -1.57
Col17a1-201ENSMUST00000026045 Ush2AQ2QI47 5193 aa5.24□□□□□ -1.57
Col17a1-201ENSMUST00000026045 Lce1eQ9D139 143 aa5.19□□□□□ -1.58
Col17a1-201ENSMUST00000026045 Gm11938Q9D3H4 131 aa5.18□□□□□ -1.58
Col17a1-201ENSMUST00000026045 Krtap31-2Q8CAY5 177 aa5.17□□□□□ -1.58
Retrieved 100 of 22,080 RNA–protein pairs in 51.8 ms