RNA–Protein interactions for RNA: ENSMUST00000021761.12

Trim27-201, Transcript of Zinc finger protein RFP, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim27, Length 4,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-201ENSMUST00000021761 Lrp1Q91ZX7 4545 aaKnown RBP6.5□□□□□ -1.37
Trim27-201ENSMUST00000021761 Gm17402F6Z0L5 76 aa6.48□□□□□ -1.37
Trim27-201ENSMUST00000021761 TnxbO35452 4006 aa6.47□□□□□ -1.37
Trim27-201ENSMUST00000021761 Mycbp2Q7TPH6 4711 aa6.47□□□□□ -1.37
Trim27-201ENSMUST00000021761 Ryr3A2AGL3 4863 aa6.46□□□□□ -1.37
Trim27-201ENSMUST00000021761 Dnah7cA0A087WR13 4024 aa6.46□□□□□ -1.38
Trim27-201ENSMUST00000021761 Fat3Q8BNA6 4555 aa6.45□□□□□ -1.38
Trim27-201ENSMUST00000021761 Dync2h1Q45VK7 4306 aa6.45□□□□□ -1.38
Trim27-201ENSMUST00000021761 Dync1h1Q9JHU4 4644 aaKnown RBP6.45□□□□□ -1.38
Trim27-201ENSMUST00000021761 Vps13bQ80TY5 3993 aa6.45□□□□□ -1.38
Trim27-201ENSMUST00000021761 Fras1Q80T14 4010 aa6.43□□□□□ -1.38
Trim27-201ENSMUST00000021761 HydinQ80W93 5154 aa6.38□□□□□ -1.39
Trim27-201ENSMUST00000021761 Dnah7aE9Q0T8 4024 aa6.34□□□□□ -1.39
Trim27-201ENSMUST00000021761 SacsQ9JLC8 4582 aa6.34□□□□□ -1.4
Trim27-201ENSMUST00000021761 Gm19668J3QMD1 248 aa6.3□□□□□ -1.4
Trim27-201ENSMUST00000021761 Gm19402J3QJV4 266 aa6.27□□□□□ -1.41
Trim27-201ENSMUST00000021761 Krtap7-1Q9D3I6 87 aa6.25□□□□□ -1.41
Trim27-201ENSMUST00000021761 Fat1A0A1L1SQU7 4645 aa6.21□□□□□ -1.41
Trim27-201ENSMUST00000021761 Kiaa1109A2AAE1 5005 aa6.18□□□□□ -1.42
Trim27-201ENSMUST00000021761 Krtap1-5A2A590 122 aa6.15□□□□□ -1.43
Trim27-201ENSMUST00000021761 Lrp2A2ARV4 4660 aa6.15□□□□□ -1.43
Trim27-201ENSMUST00000021761 Sprr2a3Q4KL71 83 aa6.12□□□□□ -1.43
Trim27-201ENSMUST00000021761 Sprr2a1Q9CQK8 83 aa6.12□□□□□ -1.43
Trim27-201ENSMUST00000021761 Herc2Q4U2R1 4836 aa6.05□□□□□ -1.44
Trim27-201ENSMUST00000021761 Pkd1O08852 4293 aa6.04□□□□□ -1.44
Trim27-201ENSMUST00000021761 Fat2Q5F226 4351 aa6.04□□□□□ -1.44
Trim27-201ENSMUST00000021761 Krtap1-4Q3V2D6 188 aa5.96□□□□□ -1.46
Trim27-201ENSMUST00000021761 LorP18165 486 aa5.95□□□□□ -1.46
Trim27-201ENSMUST00000021761 Abca13Q5SSE9 5034 aa5.9□□□□□ -1.47
Trim27-201ENSMUST00000021761 Gm18596A0A1W2P860 280 aa5.89□□□□□ -1.47
Trim27-201ENSMUST00000021761 Kmt2cQ8BRH4 4903 aa5.84□□□□□ -1.48
Trim27-201ENSMUST00000021761 Dnah8Q91XQ0 4731 aa5.84□□□□□ -1.48
Trim27-201ENSMUST00000021761 Krtap16-3Q8C1I6 86 aa5.83□□□□□ -1.48
Trim27-201ENSMUST00000021761 Krtap19-9aF8WH65 55 aa5.82□□□□□ -1.48
Trim27-201ENSMUST00000021761 Krtap12-1Q9Z287 130 aa5.75□□□□□ -1.49
Trim27-201ENSMUST00000021761 Ryr2E9Q401 4966 aaKnown RBP5.74□□□□□ -1.49
Trim27-201ENSMUST00000021761 Pkhd1l1Q80ZA4 4249 aa5.74□□□□□ -1.49
Trim27-201ENSMUST00000021761 Krtap19-3Q925H6 87 aa5.74□□□□□ -1.49
Trim27-201ENSMUST00000021761 Krtap19-1Q925H2 87 aa5.67□□□□□ -1.5
Trim27-201ENSMUST00000021761 Dnhd1D3Z2X2 4750 aa5.63□□□□□ -1.51
Trim27-201ENSMUST00000021761 4933428G20RikQ9D3X4 101 aa5.59□□□□□ -1.51
Trim27-201ENSMUST00000021761 Krtap19-9bQ99NG9 58 aa5.59□□□□□ -1.52
Trim27-201ENSMUST00000021761 PcloQ9QYX7 5068 aa5.58□□□□□ -1.52
Trim27-201ENSMUST00000021761 Gm6358A0A087WPH4 74 aa5.55□□□□□ -1.52
Trim27-201ENSMUST00000021761 Pkhd1E9PZ36 4059 aa5.54□□□□□ -1.52
Trim27-201ENSMUST00000021761 Lce1mQ9CR91 182 aa5.48□□□□□ -1.53
Trim27-201ENSMUST00000021761 Lce1jD3YUU5 139 aa5.47□□□□□ -1.53
Trim27-201ENSMUST00000021761 Ubr4A2AN08 5180 aa5.42□□□□□ -1.54
Trim27-201ENSMUST00000021761 Krtap9-5A2A5X3 358 aa5.41□□□□□ -1.54
Trim27-201ENSMUST00000021761 Birc6O88738 4882 aa5.39□□□□□ -1.55
Trim27-201ENSMUST00000021761 Herc1E9PZP8 4859 aa5.37□□□□□ -1.55
Trim27-201ENSMUST00000021761 Krtap1-3A2A588 173 aa5.33□□□□□ -1.56
Trim27-201ENSMUST00000021761 Mdn1A2ANY6 5589 aaKnown RBP5.33□□□□□ -1.56
Trim27-201ENSMUST00000021761 Krtap8-1O08633 61 aa5.33□□□□□ -1.56
Trim27-201ENSMUST00000021761 Fat4Q2PZL6 4981 aa5.28□□□□□ -1.56
Trim27-201ENSMUST00000021761 ZanO88799 5376 aa5.21□□□□□ -1.58
Trim27-201ENSMUST00000021761 Krtap19-2Q925I0 141 aa5.2□□□□□ -1.58
Trim27-201ENSMUST00000021761 Syne1Q6ZWR6 8799 aa5.18□□□□□ -1.58
Trim27-201ENSMUST00000021761 4932415D10RikA0A1W2P6U8 4986 aa5.17□□□□□ -1.58
Trim27-201ENSMUST00000021761 2310046K23RikA0A0A6YVW6 87 aa5.16□□□□□ -1.58
Trim27-201ENSMUST00000021761 Sprr2kO70562 68 aa5.15□□□□□ -1.59
Trim27-201ENSMUST00000021761 Hmcn2A2AJ76 5100 aa5.14□□□□□ -1.59
Trim27-201ENSMUST00000021761 Mt2P02798 61 aa5.14□□□□□ -1.59
Trim27-201ENSMUST00000021761 Ush2AQ2QI47 5193 aa5.13□□□□□ -1.59
Trim27-201ENSMUST00000021761 Prm1P02319 51 aa5.11□□□□□ -1.59
Trim27-201ENSMUST00000021761 Krtap17-1A2A5X6 109 aa5.09□□□□□ -1.59
Trim27-201ENSMUST00000021761 Gm10272F7CZ33 110 aa5.09□□□□□ -1.59
Trim27-201ENSMUST00000021761 Rnf213E9Q555 5152 aaKnown RBP5.06□□□□□ -1.6
Trim27-201ENSMUST00000021761 Gm7735D3YX18 52 aa5.02□□□□□ -1.61
Trim27-201ENSMUST00000021761 Lce1iQ9D6P5 149 aa5.02□□□□□ -1.61
Trim27-201ENSMUST00000021761 Gm9789Q8BIG3 52 aa4.99□□□□□ -1.61
Trim27-201ENSMUST00000021761 Lce1a2Q9D1K4 149 aa4.98□□□□□ -1.61
Trim27-201ENSMUST00000021761 Gm10100J3QK64 120 aa4.96□□□□□ -1.62
Trim27-201ENSMUST00000021761 Krtap22-2J3QNX6 67 aa4.94□□□□□ -1.62
Trim27-201ENSMUST00000021761 Krtap9-3Q3V2C1 136 aa4.93□□□□□ -1.62
Trim27-201ENSMUST00000021761 Muc16A0A140LJ72 8478 aa4.9□□□□□ -1.62
Trim27-201ENSMUST00000021761 Lce3bQ9CQM7 98 aa4.86□□□□□ -1.63
Trim27-201ENSMUST00000021761 Lce1hQ9D6R3 140 aa4.85□□□□□ -1.63
Trim27-201ENSMUST00000021761 Sprr2gO70558 76 aa4.83□□□□□ -1.64
Trim27-201ENSMUST00000021761 Gm10061D3Z714 54 aa4.82□□□□□ -1.64
Trim27-201ENSMUST00000021761 Gm10142J3KMP7 120 aa4.78□□□□□ -1.64
Trim27-201ENSMUST00000021761 Lce3cQ91V05 98 aa4.77□□□□□ -1.65
Trim27-201ENSMUST00000021761 Lce3eF8VQJ0 98 aa4.68□□□□□ -1.66
Trim27-201ENSMUST00000021761 Lce3fQ6PAI4 98 aa4.68□□□□□ -1.66
Trim27-201ENSMUST00000021761 Krtap4-2B1AQ85 167 aa4.67□□□□□ -1.66
Trim27-201ENSMUST00000021761 Gm38119A0A0A6YX29 146 aa4.65□□□□□ -1.66
Trim27-201ENSMUST00000021761 Gm11569B1AQB1 180 aa4.61□□□□□ -1.67
Trim27-201ENSMUST00000021761 Lce3dE9Q8V1 98 aa4.61□□□□□ -1.67
Trim27-201ENSMUST00000021761 Fsip2A2ARZ3 6995 aa4.59□□□□□ -1.68
Trim27-201ENSMUST00000021761 Lce1dQ9D731 133 aa4.54□□□□□ -1.68
Trim27-201ENSMUST00000021761 Lce3aQ497I5 98 aa4.49□□□□□ -1.69
Trim27-201ENSMUST00000021761 Lce1gQ9D195 139 aa4.48□□□□□ -1.69
Trim27-201ENSMUST00000021761 Gm11938Q9D3H4 131 aa4.45□□□□□ -1.7
Trim27-201ENSMUST00000021761 SspoQ8CG65 4998 aa4.42□□□□□ -1.7
Trim27-201ENSMUST00000021761 Krtap4-6Q3V4B7 195 aa4.41□□□□□ -1.7
Trim27-201ENSMUST00000021761 Krtap19-4Q925H7 84 aa4.38□□□□□ -1.71
Trim27-201ENSMUST00000021761 Muc5bE9Q5I3 4800 aa4.37□□□□□ -1.71
Trim27-201ENSMUST00000021761 Lce1bQ9D149 137 aa4.37□□□□□ -1.71
Trim27-201ENSMUST00000021761 Lce1fB9EJP6 147 aa4.36□□□□□ -1.71
Trim27-201ENSMUST00000021761 Lce1cQ9D1C5 147 aa4.36□□□□□ -1.71
Retrieved 100 of 22,080 RNA–protein pairs in 7.8 ms