RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Gm11939A2A592 99 aa5.96□□□□□ -1.46
Sdc1-201ENSMUST00000020911 Mycbp2Q7TPH6 4711 aa5.96□□□□□ -1.46
Sdc1-201ENSMUST00000020911 Krtap19-5O08632 62 aa5.95□□□□□ -1.46
Sdc1-201ENSMUST00000020911 Krtap7-1Q9D3I6 87 aa5.94□□□□□ -1.46
Sdc1-201ENSMUST00000020911 Rps29P62274 56 aa5.91□□□□□ -1.46
Sdc1-201ENSMUST00000020911 Fat3Q8BNA6 4555 aa5.91□□□□□ -1.46
Sdc1-201ENSMUST00000020911 B930094E09RikQ8C4T2 136 aa5.88□□□□□ -1.47
Sdc1-201ENSMUST00000020911 Krtap15-1Q9QZU5 150 aa5.87□□□□□ -1.47
Sdc1-201ENSMUST00000020911 Gm5767A0A0J9YTU8 78 aa5.86□□□□□ -1.47
Sdc1-201ENSMUST00000020911 Gm19426M0QWC7 77 aa5.83□□□□□ -1.48
Sdc1-201ENSMUST00000020911 Fam229aB2KGE5 128 aa5.77□□□□□ -1.49
Sdc1-201ENSMUST00000020911 Kiaa1109A2AAE1 5005 aa5.77□□□□□ -1.49
Sdc1-201ENSMUST00000020911 Herc2Q4U2R1 4836 aa5.76□□□□□ -1.49
Sdc1-201ENSMUST00000020911 HydinQ80W93 5154 aa5.75□□□□□ -1.49
Sdc1-201ENSMUST00000020911 Dnah8Q91XQ0 4731 aa5.74□□□□□ -1.49
Sdc1-201ENSMUST00000020911 Lrp2A2ARV4 4660 aa5.67□□□□□ -1.5
Sdc1-201ENSMUST00000020911 PcloQ9QYX7 5068 aa5.65□□□□□ -1.5
Sdc1-201ENSMUST00000020911 Krtap3-1A2A591 98 aa5.57□□□□□ -1.52
Sdc1-201ENSMUST00000020911 Gm40193A0A1B0GT39 78 aa5.57□□□□□ -1.52
Sdc1-201ENSMUST00000020911 Dnhd1D3Z2X2 4750 aa5.55□□□□□ -1.52
Sdc1-201ENSMUST00000020911 Birc6O88738 4882 aa5.52□□□□□ -1.53
Sdc1-201ENSMUST00000020911 Gm19402J3QJV4 266 aa5.5□□□□□ -1.53
Sdc1-201ENSMUST00000020911 Gm17416Q30KP4 66 aa5.45□□□□□ -1.54
Sdc1-201ENSMUST00000020911 Gm10318A0A1W2P728 225 aa5.43□□□□□ -1.54
Sdc1-201ENSMUST00000020911 Herc1E9PZP8 4859 aa5.41□□□□□ -1.54
Sdc1-201ENSMUST00000020911 Krtap13-1Q8K198 168 aa5.4□□□□□ -1.54
Sdc1-201ENSMUST00000020911 Lce1mQ9CR91 182 aa5.39□□□□□ -1.55
Sdc1-201ENSMUST00000020911 Crct1Q6PAI5 102 aa5.39□□□□□ -1.55
Sdc1-201ENSMUST00000020911 2210017I01RikA0A0A6YVV1 95 aa5.36□□□□□ -1.55
Sdc1-201ENSMUST00000020911 BC029722A0A0N4SW31 51 aa5.29□□□□□ -1.56
Sdc1-201ENSMUST00000020911 Camk2n1Q6QWF9 78 aa5.28□□□□□ -1.56
Sdc1-201ENSMUST00000020911 Ubr4A2AN08 5180 aa5.19□□□□□ -1.58
Sdc1-201ENSMUST00000020911 Spink7Q6IE32 76 aa5.16□□□□□ -1.58
Sdc1-201ENSMUST00000020911 Krtap16-3Q8C1I6 86 aa5.14□□□□□ -1.59
Sdc1-201ENSMUST00000020911 Gm18596A0A1W2P860 280 aa5.13□□□□□ -1.59
Sdc1-201ENSMUST00000020911 Sprr2a3Q4KL71 83 aa5.12□□□□□ -1.59
Sdc1-201ENSMUST00000020911 Sprr2a1Q9CQK8 83 aa5.12□□□□□ -1.59
Sdc1-201ENSMUST00000020911 Gm17402F6Z0L5 76 aa5.11□□□□□ -1.59
Sdc1-201ENSMUST00000020911 Krtap1-5A2A590 122 aa5.11□□□□□ -1.59
Sdc1-201ENSMUST00000020911 ZanO88799 5376 aa5.08□□□□□ -1.6
Sdc1-201ENSMUST00000020911 Ush2AQ2QI47 5193 aa5.07□□□□□ -1.6
Sdc1-201ENSMUST00000020911 Prm1P02319 51 aa5.06□□□□□ -1.6
Sdc1-201ENSMUST00000020911 Fat4Q2PZL6 4981 aa5.06□□□□□ -1.6
Sdc1-201ENSMUST00000020911 Krtap19-3Q925H6 87 aa5.05□□□□□ -1.6
Sdc1-201ENSMUST00000020911 Krtap19-1Q925H2 87 aa5.04□□□□□ -1.6
Sdc1-201ENSMUST00000020911 Hmcn2A2AJ76 5100 aa5□□□□□ -1.61
Sdc1-201ENSMUST00000020911 4932415D10RikA0A1W2P6U8 4986 aa5□□□□□ -1.61
Sdc1-201ENSMUST00000020911 Gm7735D3YX18 52 aa4.98□□□□□ -1.61
Sdc1-201ENSMUST00000020911 Krtap31-1Q9D644 177 aa4.97□□□□□ -1.61
Sdc1-201ENSMUST00000020911 Gm9789Q8BIG3 52 aa4.95□□□□□ -1.62
Sdc1-201ENSMUST00000020911 LorP18165 486 aa4.94□□□□□ -1.62
Sdc1-201ENSMUST00000020911 Tnp1P10856 55 aa4.92□□□□□ -1.62
Sdc1-201ENSMUST00000020911 Krtap1-3A2A588 173 aa4.9□□□□□ -1.63
Sdc1-201ENSMUST00000020911 Krtap1-4Q3V2D6 188 aa4.87□□□□□ -1.63
Sdc1-201ENSMUST00000020911 Rnf213E9Q555 5152 aaKnown RBP4.87□□□□□ -1.63
Sdc1-201ENSMUST00000020911 Krtap31-2Q8CAY5 177 aa4.81□□□□□ -1.64
Sdc1-201ENSMUST00000020911 Lce1jD3YUU5 139 aa4.78□□□□□ -1.64
Sdc1-201ENSMUST00000020911 Krtap12-1Q9Z287 130 aa4.69□□□□□ -1.66
Sdc1-201ENSMUST00000020911 Krtap17-1A2A5X6 109 aa4.67□□□□□ -1.66
Sdc1-201ENSMUST00000020911 Krtap19-9aF8WH65 55 aa4.64□□□□□ -1.67
Sdc1-201ENSMUST00000020911 2310046K23RikA0A0A6YVW6 87 aa4.57□□□□□ -1.68
Sdc1-201ENSMUST00000020911 Krtap9-5A2A5X3 358 aa4.51□□□□□ -1.69
Sdc1-201ENSMUST00000020911 Krtap19-2Q925I0 141 aa4.49□□□□□ -1.69
Sdc1-201ENSMUST00000020911 Lce1dQ9D731 133 aa4.47□□□□□ -1.69
Sdc1-201ENSMUST00000020911 Gm11562A0PK51 136 aa4.46□□□□□ -1.7
Sdc1-201ENSMUST00000020911 Lce1iQ9D6P5 149 aa4.45□□□□□ -1.7
Sdc1-201ENSMUST00000020911 SspoQ8CG65 4998 aa4.43□□□□□ -1.7
Sdc1-201ENSMUST00000020911 Krtap9-3Q3V2C1 136 aa4.42□□□□□ -1.7
Sdc1-201ENSMUST00000020911 Lce1a2Q9D1K4 149 aa4.42□□□□□ -1.7
Sdc1-201ENSMUST00000020911 Mdn1A2ANY6 5589 aaKnown RBP4.39□□□□□ -1.71
Sdc1-201ENSMUST00000020911 Gm10061D3Z714 54 aa4.36□□□□□ -1.71
Sdc1-201ENSMUST00000020911 Lce1hQ9D6R3 140 aa4.31□□□□□ -1.72
Sdc1-201ENSMUST00000020911 Krtap8-1O08633 61 aa4.3□□□□□ -1.72
Sdc1-201ENSMUST00000020911 Krtap19-9bQ99NG9 58 aa4.29□□□□□ -1.72
Sdc1-201ENSMUST00000020911 Lce1eQ9D139 143 aa4.25□□□□□ -1.73
Sdc1-201ENSMUST00000020911 Gm6358A0A087WPH4 74 aa4.22□□□□□ -1.73
Sdc1-201ENSMUST00000020911 Mt2P02798 61 aa4.21□□□□□ -1.74
Sdc1-201ENSMUST00000020911 4933428G20RikQ9D3X4 101 aa4.2□□□□□ -1.74
Sdc1-201ENSMUST00000020911 Muc5bE9Q5I3 4800 aa4.2□□□□□ -1.74
Sdc1-201ENSMUST00000020911 Gm11569B1AQB1 180 aa4.2□□□□□ -1.74
Sdc1-201ENSMUST00000020911 Gm11938Q9D3H4 131 aa4.14□□□□□ -1.75
Sdc1-201ENSMUST00000020911 Krtap4-2B1AQ85 167 aa4.13□□□□□ -1.75
Sdc1-201ENSMUST00000020911 Lce1gQ9D195 139 aa4.1□□□□□ -1.75
Sdc1-201ENSMUST00000020911 Sprr2gO70558 76 aa4.09□□□□□ -1.75
Sdc1-201ENSMUST00000020911 Gm11555B1AQ89 175 aa4.08□□□□□ -1.76
Sdc1-201ENSMUST00000020911 Fsip2A2ARZ3 6995 aa4□□□□□ -1.77
Sdc1-201ENSMUST00000020911 Syne2Q6ZWQ0 6874 aaKnown RBP3.97□□□□□ -1.77
Sdc1-201ENSMUST00000020911 Krtap22-2J3QNX6 67 aa3.95□□□□□ -1.78
Sdc1-201ENSMUST00000020911 Lce1cQ9D1C5 147 aa3.95□□□□□ -1.78
Sdc1-201ENSMUST00000020911 Gm11596B1AQB0 205 aa3.92□□□□□ -1.78
Sdc1-201ENSMUST00000020911 Krtap4-6Q3V4B7 195 aa3.91□□□□□ -1.78
Sdc1-201ENSMUST00000020911 Sprr2dO70555 85 aa3.89□□□□□ -1.79
Sdc1-201ENSMUST00000020911 Sprr2iO70560 76 aa3.89□□□□□ -1.79
Sdc1-201ENSMUST00000020911 Gm10272F7CZ33 110 aa3.88□□□□□ -1.79
Sdc1-201ENSMUST00000020911 Gm10100J3QK64 120 aa3.86□□□□□ -1.79
Sdc1-201ENSMUST00000020911 Lce1fB9EJP6 147 aa3.83□□□□□ -1.8
Sdc1-201ENSMUST00000020911 Lce1a1Q9CQH5 143 aa3.83□□□□□ -1.8
Sdc1-201ENSMUST00000020911 Syne1Q6ZWR6 8799 aa3.82□□□□□ -1.8
Sdc1-201ENSMUST00000020911 Krtap4-1Q3UUY3 169 aa3.79□□□□□ -1.8
Sdc1-201ENSMUST00000020911 Gm10142J3KMP7 120 aa3.77□□□□□ -1.81
Retrieved 100 of 22,080 RNA–protein pairs in 110.8 ms