RNA–Protein interactions for RNA: ENSMUST00000020877.8

Twistnb-201, Transcript of DNA-directed RNA polymerase I subunit RPA43, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Twistnb, Length 4,325 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Twistnb-201ENSMUST00000020877 Lrp1Q91ZX7 4545 aaKnown RBP6.15□□□□□ -1.43
Twistnb-201ENSMUST00000020877 TnxbO35452 4006 aa6.14□□□□□ -1.43
Twistnb-201ENSMUST00000020877 Vps13bQ80TY5 3993 aa6.13□□□□□ -1.43
Twistnb-201ENSMUST00000020877 Dync2h1Q45VK7 4306 aa6.11□□□□□ -1.43
Twistnb-201ENSMUST00000020877 Dync1h1Q9JHU4 4644 aaKnown RBP6.09□□□□□ -1.43
Twistnb-201ENSMUST00000020877 Ryr1E9PZQ0 5035 aa6.09□□□□□ -1.43
Twistnb-201ENSMUST00000020877 Fras1Q80T14 4010 aa6.09□□□□□ -1.44
Twistnb-201ENSMUST00000020877 Dnah7aE9Q0T8 4024 aa6.06□□□□□ -1.44
Twistnb-201ENSMUST00000020877 Gm17402F6Z0L5 76 aa6.03□□□□□ -1.44
Twistnb-201ENSMUST00000020877 Fat3Q8BNA6 4555 aa6.03□□□□□ -1.44
Twistnb-201ENSMUST00000020877 Ryr3A2AGL3 4863 aa6.03□□□□□ -1.44
Twistnb-201ENSMUST00000020877 SacsQ9JLC8 4582 aa6□□□□□ -1.45
Twistnb-201ENSMUST00000020877 Mycbp2Q7TPH6 4711 aa6□□□□□ -1.45
Twistnb-201ENSMUST00000020877 Krtap7-1Q9D3I6 87 aa5.95□□□□□ -1.46
Twistnb-201ENSMUST00000020877 Gm19402J3QJV4 266 aa5.9□□□□□ -1.46
Twistnb-201ENSMUST00000020877 Gm19668J3QMD1 248 aa5.9□□□□□ -1.47
Twistnb-201ENSMUST00000020877 Fat1A0A1L1SQU7 4645 aa5.89□□□□□ -1.47
Twistnb-201ENSMUST00000020877 HydinQ80W93 5154 aa5.88□□□□□ -1.47
Twistnb-201ENSMUST00000020877 Pkd1O08852 4293 aa5.83□□□□□ -1.48
Twistnb-201ENSMUST00000020877 Fat2Q5F226 4351 aa5.8□□□□□ -1.48
Twistnb-201ENSMUST00000020877 Sprr2a3Q4KL71 83 aa5.72□□□□□ -1.49
Twistnb-201ENSMUST00000020877 Sprr2a1Q9CQK8 83 aa5.72□□□□□ -1.49
Twistnb-201ENSMUST00000020877 Krtap1-5A2A590 122 aa5.71□□□□□ -1.49
Twistnb-201ENSMUST00000020877 Kiaa1109A2AAE1 5005 aa5.7□□□□□ -1.5
Twistnb-201ENSMUST00000020877 Lrp2A2ARV4 4660 aa5.7□□□□□ -1.5
Twistnb-201ENSMUST00000020877 Herc2Q4U2R1 4836 aa5.65□□□□□ -1.51
Twistnb-201ENSMUST00000020877 Abca13Q5SSE9 5034 aa5.53□□□□□ -1.52
Twistnb-201ENSMUST00000020877 Pkhd1l1Q80ZA4 4249 aa5.52□□□□□ -1.53
Twistnb-201ENSMUST00000020877 Krtap1-4Q3V2D6 188 aa5.51□□□□□ -1.53
Twistnb-201ENSMUST00000020877 Ryr2E9Q401 4966 aaKnown RBP5.51□□□□□ -1.53
Twistnb-201ENSMUST00000020877 Dnah8Q91XQ0 4731 aa5.49□□□□□ -1.53
Twistnb-201ENSMUST00000020877 Gm18596A0A1W2P860 280 aa5.48□□□□□ -1.53
Twistnb-201ENSMUST00000020877 Kmt2cQ8BRH4 4903 aa5.46□□□□□ -1.54
Twistnb-201ENSMUST00000020877 LorP18165 486 aa5.41□□□□□ -1.54
Twistnb-201ENSMUST00000020877 Krtap16-3Q8C1I6 86 aa5.41□□□□□ -1.54
Twistnb-201ENSMUST00000020877 Pkhd1E9PZ36 4059 aa5.39□□□□□ -1.55
Twistnb-201ENSMUST00000020877 4933428G20RikQ9D3X4 101 aa5.38□□□□□ -1.55
Twistnb-201ENSMUST00000020877 Krtap19-9aF8WH65 55 aa5.35□□□□□ -1.55
Twistnb-201ENSMUST00000020877 Lce1mQ9CR91 182 aa5.31□□□□□ -1.56
Twistnb-201ENSMUST00000020877 Krtap19-3Q925H6 87 aa5.31□□□□□ -1.56
Twistnb-201ENSMUST00000020877 Krtap12-1Q9Z287 130 aa5.3□□□□□ -1.56
Twistnb-201ENSMUST00000020877 Dnhd1D3Z2X2 4750 aa5.27□□□□□ -1.57
Twistnb-201ENSMUST00000020877 Krtap19-1Q925H2 87 aa5.27□□□□□ -1.57
Twistnb-201ENSMUST00000020877 Krtap19-9bQ99NG9 58 aa5.16□□□□□ -1.58
Twistnb-201ENSMUST00000020877 Birc6O88738 4882 aa5.16□□□□□ -1.58
Twistnb-201ENSMUST00000020877 PcloQ9QYX7 5068 aa5.11□□□□□ -1.59
Twistnb-201ENSMUST00000020877 Lce1jD3YUU5 139 aa5.1□□□□□ -1.59
Twistnb-201ENSMUST00000020877 Herc1E9PZP8 4859 aa5.05□□□□□ -1.6
Twistnb-201ENSMUST00000020877 Ubr4A2AN08 5180 aa5.03□□□□□ -1.6
Twistnb-201ENSMUST00000020877 Gm6358A0A087WPH4 74 aa5.03□□□□□ -1.6
Twistnb-201ENSMUST00000020877 A0A1Y7VLE6 161 aa4.99□□□□□ -1.61
Twistnb-201ENSMUST00000020877 Krtap8-1O08633 61 aa4.97□□□□□ -1.61
Twistnb-201ENSMUST00000020877 Krtap9-5A2A5X3 358 aa4.96□□□□□ -1.62
Twistnb-201ENSMUST00000020877 Fat4Q2PZL6 4981 aa4.96□□□□□ -1.62
Twistnb-201ENSMUST00000020877 Prm1P02319 51 aa4.94□□□□□ -1.62
Twistnb-201ENSMUST00000020877 Krtap1-3A2A588 173 aa4.92□□□□□ -1.62
Twistnb-201ENSMUST00000020877 Gm7735D3YX18 52 aa4.9□□□□□ -1.63
Twistnb-201ENSMUST00000020877 ZanO88799 5376 aa4.89□□□□□ -1.63
Twistnb-201ENSMUST00000020877 2310046K23RikA0A0A6YVW6 87 aa4.87□□□□□ -1.63
Twistnb-201ENSMUST00000020877 Syne1Q6ZWR6 8799 aa4.86□□□□□ -1.63
Twistnb-201ENSMUST00000020877 Mdn1A2ANY6 5589 aaKnown RBP4.84□□□□□ -1.63
Twistnb-201ENSMUST00000020877 Gm9789Q8BIG3 52 aa4.83□□□□□ -1.64
Twistnb-201ENSMUST00000020877 4932415D10RikA0A1W2P6U8 4986 aa4.83□□□□□ -1.64
Twistnb-201ENSMUST00000020877 Ush2AQ2QI47 5193 aa4.8□□□□□ -1.64
Twistnb-201ENSMUST00000020877 A0A1Y7VJH8 109 aa4.79□□□□□ -1.64
Twistnb-201ENSMUST00000020877 Hmcn2A2AJ76 5100 aa4.79□□□□□ -1.64
Twistnb-201ENSMUST00000020877 Krtap19-2Q925I0 141 aa4.78□□□□□ -1.64
Twistnb-201ENSMUST00000020877 Krtap17-1A2A5X6 109 aa4.77□□□□□ -1.65
Twistnb-201ENSMUST00000020877 Rnf213E9Q555 5152 aaKnown RBP4.72□□□□□ -1.65
Twistnb-201ENSMUST00000020877 Mt2P02798 61 aa4.71□□□□□ -1.66
Twistnb-201ENSMUST00000020877 Lce1iQ9D6P5 149 aa4.69□□□□□ -1.66
Twistnb-201ENSMUST00000020877 Krtap28-10A0A1Y7VP58 119 aa4.69□□□□□ -1.66
Twistnb-201ENSMUST00000020877 Gm10272F7CZ33 110 aa4.69□□□□□ -1.66
Twistnb-201ENSMUST00000020877 Krtap9-3Q3V2C1 136 aa4.67□□□□□ -1.66
Twistnb-201ENSMUST00000020877 Lce1a2Q9D1K4 149 aa4.66□□□□□ -1.66
Twistnb-201ENSMUST00000020877 Gm10100J3QK64 120 aa4.58□□□□□ -1.68
Twistnb-201ENSMUST00000020877 Lce1hQ9D6R3 140 aa4.58□□□□□ -1.68
Twistnb-201ENSMUST00000020877 Gm10061D3Z714 54 aa4.56□□□□□ -1.68
Twistnb-201ENSMUST00000020877 Krtap22-2J3QNX6 67 aa4.5□□□□□ -1.69
Twistnb-201ENSMUST00000020877 Muc16A0A140LJ72 8478 aa4.49□□□□□ -1.69
Twistnb-201ENSMUST00000020877 Lce3bQ9CQM7 98 aa4.48□□□□□ -1.69
Twistnb-201ENSMUST00000020877 Sprr2kO70562 68 aa4.47□□□□□ -1.69
Twistnb-201ENSMUST00000020877 A030005L19RikA0A1Y7VIU2 113 aa4.45□□□□□ -1.7
Twistnb-201ENSMUST00000020877 Gm7544A0A1Y7VJ58 118 aa4.45□□□□□ -1.7
Twistnb-201ENSMUST00000020877 Gm11569B1AQB1 180 aa4.42□□□□□ -1.7
Twistnb-201ENSMUST00000020877 Gm10142J3KMP7 120 aa4.42□□□□□ -1.7
Twistnb-201ENSMUST00000020877 A030003K21RikA0A1Y7VIM3 128 aa4.42□□□□□ -1.7
Twistnb-201ENSMUST00000020877 Krtap28-13A0A087WQP5 138 aa4.4□□□□□ -1.71
Twistnb-201ENSMUST00000020877 Sprr2gO70558 76 aa4.37□□□□□ -1.71
Twistnb-201ENSMUST00000020877 Lce1dQ9D731 133 aa4.35□□□□□ -1.71
Twistnb-201ENSMUST00000020877 Lce3cQ91V05 98 aa4.35□□□□□ -1.71
Twistnb-201ENSMUST00000020877 A030005K14RikA0A1Y7VNY1 122 aa4.34□□□□□ -1.72
Twistnb-201ENSMUST00000020877 Lce3dE9Q8V1 98 aa4.27□□□□□ -1.73
Twistnb-201ENSMUST00000020877 Lce3eF8VQJ0 98 aa4.27□□□□□ -1.73
Twistnb-201ENSMUST00000020877 Lce3fQ6PAI4 98 aa4.27□□□□□ -1.73
Twistnb-201ENSMUST00000020877 Gm38119A0A0A6YX29 146 aa4.23□□□□□ -1.73
Twistnb-201ENSMUST00000020877 Gm11938Q9D3H4 131 aa4.22□□□□□ -1.73
Twistnb-201ENSMUST00000020877 Krtap4-6Q3V4B7 195 aa4.18□□□□□ -1.74
Twistnb-201ENSMUST00000020877 SspoQ8CG65 4998 aa4.16□□□□□ -1.74
Twistnb-201ENSMUST00000020877 Krtap4-2B1AQ85 167 aa4.15□□□□□ -1.74
Retrieved 100 of 22,080 RNA–protein pairs in 7.7 ms