RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	RPP1	P38786	293 aa		4.62	□□□□□ -1.67
VMA22	YHR060W	CRG1	P38892	291 aa	RIP-Chip data	4.62	□□□□□ -1.67	not detected
VMA22	YHR060W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
VMA22	YHR060W	SEC28	P40509	296 aa	Known RBP	4.62	□□□□□ -1.67
VMA22	YHR060W	CHA4	P43634	648 aa		4.62	□□□□□ -1.67
VMA22	YHR060W	GCV2	P49095	1034 aa		4.62	□□□□□ -1.67
VMA22	YHR060W	HOS2	P53096	452 aa	Predicted RBP	4.62	□□□□□ -1.67
VMA22	YHR060W	MTG1	Q03151	367 aa	Predicted RBP	4.62	□□□□□ -1.67
VMA22	YHR060W	MUB1	Q03162	620 aa		4.62	□□□□□ -1.67
VMA22	YHR060W	YDR131C	Q03899	556 aa		4.62	□□□□□ -1.67
VMA22	YHR060W	YAP6	Q03935	383 aa		4.62	□□□□□ -1.67
VMA22	YHR060W	YLR224W	Q05947	369 aa		4.62	□□□□□ -1.67
VMA22	YHR060W	TMA16	Q08687	178 aa		4.62	□□□□□ -1.67
VMA22	YHR060W	TGL5	Q12043	749 aa		4.62	□□□□□ -1.67
VMA22	YHR060W	SMF3	Q12078	473 aa	Predicted RBP	4.62	□□□□□ -1.67
VMA22	YHR060W	ECM3	Q99252	613 aa		4.62	□□□□□ -1.67
VMA22	YHR060W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
VMA22	YHR060W	ILS1	P09436	1072 aa	Known RBP	4.61	□□□□□ -1.67
VMA22	YHR060W	ADK2	P26364	225 aa		4.61	□□□□□ -1.67
VMA22	YHR060W	PUP2	P32379	260 aa		4.61	□□□□□ -1.67
VMA22	YHR060W	OTU2	P38747	307 aa	Known RBP	4.61	□□□□□ -1.67
VMA22	YHR060W	MSS4	P38994	779 aa		4.61	□□□□□ -1.67
VMA22	YHR060W	SLZ1	P40167	298 aa		4.61	□□□□□ -1.67
VMA22	YHR060W	PIG2	P40187	538 aa		4.61	□□□□□ -1.67
VMA22	YHR060W	PFK26	P40433	827 aa	Known RBP	4.61	□□□□□ -1.67
VMA22	YHR060W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
VMA22	YHR060W	ROK1	P45818	564 aa	Predicted RBP	4.61	□□□□□ -1.67
VMA22	YHR060W	YDL183C	P48569	320 aa		4.61	□□□□□ -1.67
VMA22	YHR060W	GLO1	P50107	326 aa		4.61	□□□□□ -1.67
VMA22	YHR060W	NCS6	P53088	359 aa		4.61	□□□□□ -1.67
VMA22	YHR060W	ART5	P53244	586 aa	Known RBP	4.61	□□□□□ -1.67
VMA22	YHR060W	YGR250C	P53316	781 aa	Known RBP	4.61	□□□□□ -1.67
VMA22	YHR060W	PEX25	Q02969	394 aa		4.61	□□□□□ -1.67
VMA22	YHR060W	YDR286C	Q05530	114 aa		4.61	□□□□□ -1.67
VMA22	YHR060W	ATG23	Q06671	453 aa		4.61	□□□□□ -1.67
VMA22	YHR060W	ESC8	Q08119	714 aa		4.61	□□□□□ -1.67
VMA22	YHR060W	YPL191C	Q08930	360 aa		4.61	□□□□□ -1.67
VMA22	YHR060W	GET3	Q12154	354 aa	Known RBP	4.61	□□□□□ -1.67
VMA22	YHR060W	PDH1	Q12428	516 aa	Known RBP	4.61	□□□□□ -1.67
VMA22	YHR060W	ERG8	P24521	451 aa		4.6	□□□□□ -1.67
VMA22	YHR060W	GPI10	P30777	616 aa		4.6	□□□□□ -1.67
VMA22	YHR060W	NTH1	P32356	751 aa		4.6	□□□□□ -1.67
VMA22	YHR060W	DSS4	P32601	143 aa		4.6	□□□□□ -1.67
VMA22	YHR060W	ALY1	P36117	915 aa		4.6	□□□□□ -1.67
VMA22	YHR060W	COS111	P38308	924 aa		4.6	□□□□□ -1.67
VMA22	YHR060W	RGI2	P40188	164 aa		4.6	□□□□□ -1.67
VMA22	YHR060W	MNN10	P50108	393 aa	Known RBP	4.6	□□□□□ -1.67
VMA22	YHR060W	TEX1	P53851	422 aa	Known RBP	4.6	□□□□□ -1.67
VMA22	YHR060W	SSL2	Q00578	843 aa		4.6	□□□□□ -1.67
VMA22	YHR060W	SWT1	Q12104	458 aa		4.6	□□□□□ -1.67
VMA22	YHR060W	GRX6	Q12438	231 aa		4.6	□□□□□ -1.67
VMA22	YHR060W	PAR32	Q12515	295 aa	Known RBP	4.6	□□□□□ -1.67
VMA22	YHR060W	YJR112W-A	Q3E743	109 aa		4.6	□□□□□ -1.67
VMA22	YHR060W	VCX1	Q99385	411 aa		4.6	□□□□□ -1.67
VMA22	YHR060W	TUP1	P16649	713 aa		4.59	□□□□□ -1.67
VMA22	YHR060W	PRP4	P20053	465 aa	Known RBP	4.59	□□□□□ -1.67
VMA22	YHR060W	TRX1	P22217	103 aa	Known RBP	4.59	□□□□□ -1.67
VMA22	YHR060W	SWH1	P35845	1188 aa		4.59	□□□□□ -1.67
VMA22	YHR060W	AGP2	P38090	596 aa		4.59	□□□□□ -1.67
VMA22	YHR060W	VID24	P38263	362 aa		4.59	□□□□□ -1.67
VMA22	YHR060W	STB5	P38699	743 aa		4.59	□□□□□ -1.67
VMA22	YHR060W	SMF1	P38925	575 aa		4.59	□□□□□ -1.67
VMA22	YHR060W	YJL206C	P39529	758 aa		4.59	□□□□□ -1.67
VMA22	YHR060W	ARB1	P40024	610 aa	Known RBP	4.59	□□□□□ -1.67
VMA22	YHR060W	MET18	P40469	1032 aa		4.59	□□□□□ -1.67
VMA22	YHR060W	JJJ1	P53863	590 aa		4.59	□□□□□ -1.67
VMA22	YHR060W	EOS1	P53938	366 aa		4.59	□□□□□ -1.67
VMA22	YHR060W	NGL3	Q03210	505 aa		4.59	□□□□□ -1.67
VMA22	YHR060W	THI22	Q06490	572 aa		4.59	□□□□□ -1.67
VMA22	YHR060W	YFT2	Q06676	274 aa		4.59	□□□□□ -1.67
VMA22	YHR060W	CIR2	Q08822	631 aa		4.59	□□□□□ -1.67
VMA22	YHR060W	FRE5	Q08908	694 aa		4.59	□□□□□ -1.67
VMA22	YHR060W	HRP1	Q99383	534 aa	Known RBP	4.59	□□□□□ -1.67
VMA22	YHR060W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
VMA22	YHR060W	CLC1	P17891	233 aa		4.58	□□□□□ -1.68
VMA22	YHR060W	PRP28	P23394	588 aa		4.58	□□□□□ -1.68
VMA22	YHR060W	EFT1	P32324	842 aa	Known RBP	4.58	□□□□□ -1.68
VMA22	YHR060W	DPH2	P32461	534 aa		4.58	□□□□□ -1.68
VMA22	YHR060W	LST4	P34239	828 aa		4.58	□□□□□ -1.68
VMA22	YHR060W	GCS1	P35197	352 aa		4.58	□□□□□ -1.68
VMA22	YHR060W	EHT1	P38295	451 aa		4.58	□□□□□ -1.68
VMA22	YHR060W	LNP1	P38878	278 aa		4.58	□□□□□ -1.68
VMA22	YHR060W	PLB1	P39105	664 aa		4.58	□□□□□ -1.68
VMA22	YHR060W	PES4	P39684	611 aa		4.58	□□□□□ -1.68
VMA22	YHR060W	FMP10	P40098	244 aa		4.58	□□□□□ -1.68
VMA22	YHR060W	LRO1	P40345	661 aa		4.58	□□□□□ -1.68
VMA22	YHR060W	YIL077C	P40508	320 aa		4.58	□□□□□ -1.68
VMA22	YHR060W	COS12	P53053	380 aa		4.58	□□□□□ -1.68
VMA22	YHR060W	SGF73	P53165	657 aa		4.58	□□□□□ -1.68
VMA22	YHR060W	PIL1	P53252	339 aa	Known RBP	4.58	□□□□□ -1.68
VMA22	YHR060W	NGL2	Q03264	515 aa	Known RBP	4.58	□□□□□ -1.68
VMA22	YHR060W	ERB1	Q04660	807 aa	Known RBP	4.58	□□□□□ -1.68
VMA22	YHR060W	AIM32	Q04689	311 aa		4.58	□□□□□ -1.68
VMA22	YHR060W	RIX7	Q07844	837 aa	Known RBP	4.58	□□□□□ -1.68
VMA22	YHR060W	HSP42	Q12329	375 aa		4.58	□□□□□ -1.68
VMA22	YHR060W	NPC2	Q12408	173 aa		4.58	□□□□□ -1.68
VMA22	YHR060W	YRF1-4	O13559	1382 aa		4.57	□□□□□ -1.68
VMA22	YHR060W	YBR085C-A	O43137	85 aa		4.57	□□□□□ -1.68
VMA22	YHR060W	PDE1	P22434	369 aa		4.57	□□□□□ -1.68
VMA22	YHR060W	CLB1	P24868	471 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms