RNA–Protein interactions for RNA: YDR310C

SUM1, Transcript of Transcriptional repressor that regulates middle-sporulation genes, yeastyeast

Gene SUM1, Length 3,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUM1YDR310C HTA1P04911 132 aaKnown RBP5.06□□□□□ -1.6
SUM1YDR310C HTA2P04912 132 aa5.06□□□□□ -1.6
SUM1YDR310C YUH1P35127 236 aa5.06□□□□□ -1.6
SUM1YDR310C GIP1P38229 639 aa5.06□□□□□ -1.6
SUM1YDR310C SSN3P39073 555 aa5.06□□□□□ -1.6
SUM1YDR310C GDI1P39958 451 aaKnown RBP5.06□□□□□ -1.6
SUM1YDR310C ROK1P45818 564 aaPredicted RBP5.06□□□□□ -1.6
SUM1YDR310C SKP1P52286 194 aa5.06□□□□□ -1.6
SUM1YDR310C VID30P53076 958 aa5.06□□□□□ -1.6
SUM1YDR310C MRPS17Q03246 237 aaPredicted RBP5.06□□□□□ -1.6
SUM1YDR310C MET7Q08645 548 aa5.06□□□□□ -1.6
SUM1YDR310C ULA1Q12059 462 aa5.06□□□□□ -1.6
SUM1YDR310C SVS1Q12254 260 aa5.06□□□□□ -1.6
SUM1YDR310C Q0182Q9ZZW1 134 aa5.06□□□□□ -1.6
SUM1YDR310C YCK1P23291 538 aa5.06□□□□□ -1.6
SUM1YDR310C YKR051WP36142 418 aa5.06□□□□□ -1.6
SUM1YDR310C NEM1P38757 446 aa5.06□□□□□ -1.6
SUM1YDR310C YJR061WP40355 935 aa5.06□□□□□ -1.6
SUM1YDR310C UBP7P40453 1071 aa5.06□□□□□ -1.6
SUM1YDR310C MNT2P53059 558 aa5.06□□□□□ -1.6
SUM1YDR310C NOG2P53742 486 aaKnown RBP5.06□□□□□ -1.6
SUM1YDR310C YDR344CQ05510 147 aa5.06□□□□□ -1.6
SUM1YDR310C ISU2Q12056 156 aa5.06□□□□□ -1.6
SUM1YDR310C HXK2P04807 486 aaKnown RBP5.05□□□□□ -1.6
SUM1YDR310C AMS1P22855 1083 aa5.05□□□□□ -1.6
SUM1YDR310C ERV1P27882 189 aa5.05□□□□□ -1.6
SUM1YDR310C SPT8P38915 602 aa5.05□□□□□ -1.6
SUM1YDR310C BEM4P39011 633 aa5.05□□□□□ -1.6
SUM1YDR310C LRO1P40345 661 aa5.05□□□□□ -1.6
SUM1YDR310C FMS1P50264 508 aa5.05□□□□□ -1.6
SUM1YDR310C NHX1Q04121 633 aa5.05□□□□□ -1.6
SUM1YDR310C ARR1Q06596 294 aa5.05□□□□□ -1.6
SUM1YDR310C TY1A-DR3Q12441 440 aa5.05□□□□□ -1.6
SUM1YDR310C PRT1P06103 763 aaKnown RBP5.05□□□□□ -1.6
SUM1YDR310C GEX1P25596 615 aa5.05□□□□□ -1.6
SUM1YDR310C TFA2P36145 328 aa5.05□□□□□ -1.6
SUM1YDR310C SSZ1P38788 538 aaKnown RBP5.05□□□□□ -1.6
SUM1YDR310C MLH1P38920 769 aa5.05□□□□□ -1.6
SUM1YDR310C VPS60Q03390 229 aa5.05□□□□□ -1.6
SUM1YDR310C SEG1Q04279 960 aa5.05□□□□□ -1.6
SUM1YDR310C YRF1-3P0CX14 1859 aa5.05□□□□□ -1.6
SUM1YDR310C YRF1-7P0CX15 1859 aa5.05□□□□□ -1.6
SUM1YDR310C YRF1-6P53819 1859 aa5.05□□□□□ -1.6
SUM1YDR310C GCN4P03069 281 aa5.04□□□□□ -1.6
SUM1YDR310C PTC4P38089 393 aa5.04□□□□□ -1.6
SUM1YDR310C MSS2P40990 351 aa5.04□□□□□ -1.6
SUM1YDR310C UBP2Q01476 1272 aa5.04□□□□□ -1.6
SUM1YDR310C UTP5Q04177 643 aaKnown RBP5.04□□□□□ -1.6
SUM1YDR310C STE23Q06010 1027 aa5.04□□□□□ -1.6
SUM1YDR310C RPN7Q06103 429 aaKnown RBP5.04□□□□□ -1.6
SUM1YDR310C IWR1Q07532 353 aaPredicted RBP5.04□□□□□ -1.6
SUM1YDR310C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
SUM1YDR310C LDB17Q12342 491 aa5.04□□□□□ -1.6
SUM1YDR310C UNG1P12887 359 aa5.04□□□□□ -1.6
SUM1YDR310C DAL81P21657 970 aa5.04□□□□□ -1.6
SUM1YDR310C CPR2P23285 205 aa5.04□□□□□ -1.6
SUM1YDR310C BUD5P25300 642 aaPredicted RBP5.04□□□□□ -1.6
SUM1YDR310C ICL1P28240 557 aaPredicted RBP5.04□□□□□ -1.6
SUM1YDR310C ITR1P30605 584 aa5.04□□□□□ -1.6
SUM1YDR310C EFT1P32324 842 aaKnown RBP5.04□□□□□ -1.6
SUM1YDR310C DAD2P36162 133 aa5.04□□□□□ -1.6
SUM1YDR310C BRE5P53741 515 aaKnown RBP5.04□□□□□ -1.6
SUM1YDR310C INN1P53901 409 aa5.04□□□□□ -1.6
SUM1YDR310C SWT1Q12104 458 aa5.04□□□□□ -1.6
SUM1YDR310C WTM2Q12206 467 aa5.04□□□□□ -1.6
SUM1YDR310C SFI1Q12369 946 aa5.04□□□□□ -1.6
SUM1YDR310C TDH1P00360 332 aaKnown RBP5.04□□□□□ -1.6
SUM1YDR310C TGL1P34163 548 aa5.04□□□□□ -1.6
SUM1YDR310C SRP68P38687 599 aaKnown RBP5.04□□□□□ -1.6
SUM1YDR310C UTP9P38882 575 aaKnown RBP5.04□□□□□ -1.6
SUM1YDR310C FLC2P39719 783 aa5.04□□□□□ -1.6
SUM1YDR310C CDC40P40968 455 aaPredicted RBP5.04□□□□□ -1.6
SUM1YDR310C BST1P43571 1029 aa5.04□□□□□ -1.6
SUM1YDR310C PEX13P80667 386 aa5.04□□□□□ -1.6
SUM1YDR310C TUB2P02557 457 aaKnown RBP5.03□□□□□ -1.6
SUM1YDR310C PAP1P29468 568 aaKnown RBP5.03□□□□□ -1.6
SUM1YDR310C AFG1P32317 509 aa5.03□□□□□ -1.6
SUM1YDR310C SRB2P34162 210 aa5.03□□□□□ -1.6
SUM1YDR310C STV1P37296 890 aa5.03□□□□□ -1.6
SUM1YDR310C CHS6P40955 746 aa5.03□□□□□ -1.6
SUM1YDR310C NOP15P53927 220 aaPredicted RBP5.03□□□□□ -1.6
SUM1YDR310C GSH2Q08220 491 aa5.03□□□□□ -1.6
SUM1YDR310C UBX3Q12229 455 aa5.03□□□□□ -1.6
SUM1YDR310C YRM1Q12340 786 aa5.03□□□□□ -1.6
SUM1YDR310C PRP22P24384 1145 aaKnown RBP5.03□□□□□ -1.6
SUM1YDR310C YCL002CP25565 263 aa5.03□□□□□ -1.6
SUM1YDR310C PER1P25625 357 aa5.03□□□□□ -1.6
SUM1YDR310C RPC82P32349 654 aa5.03□□□□□ -1.6
SUM1YDR310C UTR2P32623 467 aa5.03□□□□□ -1.6
SUM1YDR310C PHO11P35842 467 aa5.03□□□□□ -1.6
SUM1YDR310C PHO12P38693 467 aa5.03□□□□□ -1.6
SUM1YDR310C MTG2P38860 518 aa5.03□□□□□ -1.6
SUM1YDR310C RLP7P40693 322 aaKnown RBP5.03□□□□□ -1.6
SUM1YDR310C NUP85P46673 744 aa5.03□□□□□ -1.6
SUM1YDR310C NMA111P53920 997 aa5.03□□□□□ -1.6
SUM1YDR310C NGL2Q03264 515 aaKnown RBP5.03□□□□□ -1.6
SUM1YDR310C RCR2Q03446 210 aaKnown RBP5.03□□□□□ -1.6
SUM1YDR310C RBS1Q05672 457 aaKnown RBP5.03□□□□□ -1.6
SUM1YDR310C GCD1P09032 578 aaPredicted RBP5.02□□□□□ -1.61
SUM1YDR310C SPT23P35210 1082 aa5.02□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms