RNA–Protein interactions for RNA: YDR233C

RTN1, Transcript of Reticulon protein, yeastyeast

Gene RTN1, Length 888 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTN1YDR233C HEM1P09950 548 aaPredicted RBP5.63□□□□□ -1.51
RTN1YDR233C TY2A-LR1P0C2J4 438 aa5.63□□□□□ -1.51
RTN1YDR233C TY2A-FP0CX61 438 aa5.63□□□□□ -1.51
RTN1YDR233C TY2A-GR2P0CX62 438 aa5.63□□□□□ -1.51
RTN1YDR233C TY2A-CP25383 438 aa5.63□□□□□ -1.51
RTN1YDR233C SLC1P33333 303 aa5.63□□□□□ -1.51
RTN1YDR233C RRN3P36070 627 aa5.63□□□□□ -1.51
RTN1YDR233C RIX1P38883 763 aaPredicted RBP5.63□□□□□ -1.51
RTN1YDR233C LAS21P40367 830 aa5.63□□□□□ -1.51
RTN1YDR233C COG1P53079 417 aa5.63□□□□□ -1.51
RTN1YDR233C FMP30Q02883 468 aa5.63□□□□□ -1.51
RTN1YDR233C TY2A-DR2Q03483 438 aa5.63□□□□□ -1.51
RTN1YDR233C TY2A-BQ12260 438 aa5.63□□□□□ -1.51
RTN1YDR233C TY2A-OR2Q12293 438 aa5.63□□□□□ -1.51
RTN1YDR233C TY2A-DR1Q12392 438 aa5.63□□□□□ -1.51
RTN1YDR233C TY2A-OR1Q12439 438 aa5.63□□□□□ -1.51
RTN1YDR233C RVB2Q12464 471 aaKnown RBP5.63□□□□□ -1.51
RTN1YDR233C TY2A-DR3Q99303 438 aa5.63□□□□□ -1.51
RTN1YDR233C ATP2P00830 511 aaKnown RBP5.62□□□□□ -1.51
RTN1YDR233C TPK1P06244 397 aa5.62□□□□□ -1.51
RTN1YDR233C SES1P07284 462 aaKnown RBP5.62□□□□□ -1.51
RTN1YDR233C YML003WP0CF16 290 aa5.62□□□□□ -1.51
RTN1YDR233C SWC3P31376 625 aa5.62□□□□□ -1.51
RTN1YDR233C GCD7P32502 381 aaPredicted RBP5.62□□□□□ -1.51
RTN1YDR233C OPT1P40897 799 aa5.62□□□□□ -1.51
RTN1YDR233C SKP2P42843 763 aa5.62□□□□□ -1.51
RTN1YDR233C PLM2Q04383 521 aa5.62□□□□□ -1.51
RTN1YDR233C NKP1Q12493 238 aa5.62□□□□□ -1.51
RTN1YDR233C COX1P00401 534 aa5.61□□□□□ -1.51
RTN1YDR233C TUB1P09733 447 aaKnown RBP5.61□□□□□ -1.51
RTN1YDR233C RAD16P31244 790 aa5.61□□□□□ -1.51
RTN1YDR233C MEP3P53390 489 aa5.61□□□□□ -1.51
RTN1YDR233C AI5_ALPHAQ9ZZX1 630 aa5.61□□□□□ -1.51
RTN1YDR233C RTC1Q08281 1341 aa5.6□□□□□ -1.51
RTN1YDR233C LRE1P25579 583 aaKnown RBP5.6□□□□□ -1.51
RTN1YDR233C MCM10P32354 571 aa5.6□□□□□ -1.51
RTN1YDR233C SIP1P32578 815 aa5.6□□□□□ -1.51
RTN1YDR233C RPC34P32910 317 aa5.6□□□□□ -1.51
RTN1YDR233C HES1P35843 434 aa5.6□□□□□ -1.51
RTN1YDR233C TEF4P36008 412 aaKnown RBP5.6□□□□□ -1.51
RTN1YDR233C YER010CP40011 234 aa5.6□□□□□ -1.51
RTN1YDR233C SAE2P46946 345 aa5.6□□□□□ -1.51
RTN1YDR233C TAX4P47030 604 aa5.6□□□□□ -1.51
RTN1YDR233C YJL043WP47053 257 aa5.6□□□□□ -1.51
RTN1YDR233C RAD34Q06665 692 aa5.6□□□□□ -1.51
RTN1YDR233C OSW1Q08692 278 aa5.6□□□□□ -1.51
RTN1YDR233C RFA2P26754 273 aaKnown RBP5.59□□□□□ -1.51
RTN1YDR233C GSY2P27472 705 aa5.59□□□□□ -1.51
RTN1YDR233C RPT3P33298 428 aaKnown RBP5.59□□□□□ -1.51
RTN1YDR233C KES1P35844 434 aaKnown RBP5.59□□□□□ -1.51
RTN1YDR233C RPF2P36160 344 aaKnown RBP5.59□□□□□ -1.51
RTN1YDR233C VBA2P38358 474 aaKnown RBP5.59□□□□□ -1.51
RTN1YDR233C PSD1P39006 500 aa5.59□□□□□ -1.51
RTN1YDR233C KAP123P40069 1113 aaKnown RBP5.59□□□□□ -1.51
RTN1YDR233C UBP7P40453 1071 aa5.59□□□□□ -1.51
RTN1YDR233C SNO4Q04902 237 aa5.59□□□□□ -1.51
RTN1YDR233C HSP33Q08914 237 aaKnown RBP5.59□□□□□ -1.51
RTN1YDR233C YPL191CQ08930 360 aa5.59□□□□□ -1.51
RTN1YDR233C HSP32Q08992 237 aa5.59□□□□□ -1.51
RTN1YDR233C YSP3P25036 478 aa5.58□□□□□ -1.52
RTN1YDR233C ILV6P25605 309 aaKnown RBP5.58□□□□□ -1.52
RTN1YDR233C LAC1P28496 418 aa5.58□□□□□ -1.52
RTN1YDR233C CBF2P32504 956 aa5.58□□□□□ -1.52
RTN1YDR233C NUP120P35729 1037 aa5.58□□□□□ -1.52
RTN1YDR233C UME6P39001 836 aa5.58□□□□□ -1.52
RTN1YDR233C FUN12P39730 1002 aaKnown RBP5.58□□□□□ -1.52
RTN1YDR233C DPH1P40487 425 aaKnown RBP5.58□□□□□ -1.52
RTN1YDR233C REG1Q00816 1014 aa5.58□□□□□ -1.52
RTN1YDR233C OPY2Q06810 360 aa5.58□□□□□ -1.52
RTN1YDR233C TMA16Q08687 178 aa5.58□□□□□ -1.52
RTN1YDR233C SWT1Q12104 458 aa5.58□□□□□ -1.52
RTN1YDR233C PCT1P13259 424 aa5.57□□□□□ -1.52
RTN1YDR233C HOT13P36078 116 aa5.57□□□□□ -1.52
RTN1YDR233C FMP10P40098 244 aa5.57□□□□□ -1.52
RTN1YDR233C YIL161WP40449 235 aaKnown RBP5.57□□□□□ -1.52
RTN1YDR233C MSY1P48527 492 aa5.57□□□□□ -1.52
RTN1YDR233C ASE1P50275 885 aa5.57□□□□□ -1.52
RTN1YDR233C YNR061CP53747 219 aa5.57□□□□□ -1.52
RTN1YDR233C SUB1P54000 292 aaKnown RBP5.57□□□□□ -1.52
RTN1YDR233C ATG23Q06671 453 aa5.57□□□□□ -1.52
RTN1YDR233C YOL087CQ99247 1116 aa5.57□□□□□ -1.52
RTN1YDR233C VCX1Q99385 411 aa5.57□□□□□ -1.52
RTN1YDR233C PFK2P16862 959 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
RTN1YDR233C RER1P25560 188 aa5.56□□□□□ -1.52
RTN1YDR233C GSH1P32477 678 aa5.56□□□□□ -1.52
RTN1YDR233C CNS1P33313 385 aa5.56□□□□□ -1.52
RTN1YDR233C IST3P40565 148 aaPredicted RBP5.56□□□□□ -1.52
RTN1YDR233C CIR1P42940 261 aa5.56□□□□□ -1.52
RTN1YDR233C SPN1Q06505 410 aaPredicted RBP5.56□□□□□ -1.52
RTN1YDR233C SLK19Q08581 821 aaKnown RBP5.56□□□□□ -1.52
RTN1YDR233C RDL1Q12305 139 aaKnown RBP5.56□□□□□ -1.52
RTN1YDR233C SPO16P17122 198 aa5.55□□□□□ -1.52
RTN1YDR233C RIC1P40395 1056 aa5.55□□□□□ -1.52
RTN1YDR233C DJP1P40564 432 aa5.55□□□□□ -1.52
RTN1YDR233C YAT1P80235 687 aa5.55□□□□□ -1.52
RTN1YDR233C YDR109CQ04585 715 aa5.55□□□□□ -1.52
RTN1YDR233C BAG7Q12128 409 aa5.55□□□□□ -1.52
RTN1YDR233C YLR111WQ12528 110 aa5.55□□□□□ -1.52
RTN1YDR233C RPB2P08518 1224 aaKnown RBP5.54□□□□□ -1.52
RTN1YDR233C MAK32P23060 363 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms