RNA–Protein interactions for RNA: YDR233C

RTN1, Transcript of Reticulon protein, yeastyeast

Gene RTN1, Length 888 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTN1YDR233C DRS1P32892 752 aaKnown RBP16.4■□□□□ 0.22
RTN1YDR233C MTC1P47018 478 aaKnown RBP16.2■□□□□ 0.18
RTN1YDR233C BFR2Q06631 534 aaKnown RBP14.24□□□□□ -0.13
RTN1YDR233C DIP2Q12220 943 aaPredicted RBP13.89□□□□□ -0.19
RTN1YDR233C AVT3P36062 692 aa13.81□□□□□ -0.2
RTN1YDR233C TFA1P36100 482 aa13.53□□□□□ -0.24
RTN1YDR233C ISW2Q08773 1120 aa13.07□□□□□ -0.32
RTN1YDR233C RSE1Q04693 1361 aaKnown RBP13.07□□□□□ -0.32
RTN1YDR233C FAP1P53971 965 aa13.04□□□□□ -0.32
RTN1YDR233C RPG1P38249 964 aaKnown RBP12.94□□□□□ -0.34
RTN1YDR233C PRI1P10363 409 aa12.92□□□□□ -0.34
RTN1YDR233C AAD16Q02895 342 aa12.63□□□□□ -0.39
RTN1YDR233C RPL17AP05740 184 aaKnown RBP12.6□□□□□ -0.39
RTN1YDR233C RPL17BP46990 184 aaKnown RBP12.6□□□□□ -0.39
RTN1YDR233C REB1P21538 810 aa12.37□□□□□ -0.43
RTN1YDR233C TSR3Q12094 313 aaKnown RBP12.28□□□□□ -0.44
RTN1YDR233C PRY3P47033 881 aa12.22□□□□□ -0.45
RTN1YDR233C SPT21P35209 758 aa12.2□□□□□ -0.46
RTN1YDR233C RIM101P33400 625 aa12.03□□□□□ -0.48
RTN1YDR233C YKR023WP36119 530 aaKnown RBP11.76□□□□□ -0.53
RTN1YDR233C MRPL32P25348 183 aa11.73□□□□□ -0.53
RTN1YDR233C YCK3P39962 524 aa11.72□□□□□ -0.53
RTN1YDR233C OXP1P28273 1286 aa11.7□□□□□ -0.54
RTN1YDR233C PTP3P40048 928 aa11.69□□□□□ -0.54
RTN1YDR233C SSP1P38871 571 aa11.54□□□□□ -0.56
RTN1YDR233C HAA1Q12753 694 aaKnown RBP11.52□□□□□ -0.57
RTN1YDR233C TFC8Q12308 588 aa11.5□□□□□ -0.57
RTN1YDR233C HOP09932 586 aa11.49□□□□□ -0.57
RTN1YDR233C CDC27P38042 758 aa11.48□□□□□ -0.57
RTN1YDR233C YAH1Q12184 172 aaKnown RBP11.48□□□□□ -0.57
RTN1YDR233C RQC2Q12532 1038 aaKnown RBP11.46□□□□□ -0.57
RTN1YDR233C DCD1P06773 312 aa11.42□□□□□ -0.58
RTN1YDR233C YIL055CP40523 627 aaKnown RBP11.41□□□□□ -0.58
RTN1YDR233C YLR271WQ06152 274 aa11.38□□□□□ -0.59
RTN1YDR233C RSM7P47150 247 aa11.29□□□□□ -0.6
RTN1YDR233C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.28□□□□□ -0.6not detected
RTN1YDR233C DMA1P38823 416 aa11.19□□□□□ -0.62
RTN1YDR233C BCH2P36122 765 aa11.17□□□□□ -0.62
RTN1YDR233C MGA2P40578 1113 aa11.1□□□□□ -0.63
RTN1YDR233C AI2P03876 854 aa11.09□□□□□ -0.63
RTN1YDR233C PSD2P53037 1138 aaKnown RBP11.07□□□□□ -0.64
RTN1YDR233C CST9Q06032 482 aa11.06□□□□□ -0.64
RTN1YDR233C EPS1P40557 701 aa10.99□□□□□ -0.65
RTN1YDR233C MAP2P38174 421 aaKnown RBP10.95□□□□□ -0.66
RTN1YDR233C BBC1P47068 1157 aa10.95□□□□□ -0.66
RTN1YDR233C SCY1P53009 804 aa10.93□□□□□ -0.66
RTN1YDR233C UBP10P53874 792 aaPredicted RBP10.93□□□□□ -0.66
RTN1YDR233C BDF1P35817 686 aa10.9□□□□□ -0.66
RTN1YDR233C YGL015CP33199 130 aa10.87□□□□□ -0.67
RTN1YDR233C MRM1P25270 412 aa10.76□□□□□ -0.69
RTN1YDR233C SLX5P32828 619 aaKnown RBP10.7□□□□□ -0.7
RTN1YDR233C RCR1P38212 213 aa10.68□□□□□ -0.7
RTN1YDR233C RAM2P29703 316 aa10.67□□□□□ -0.7
RTN1YDR233C RTG3P38165 486 aa10.59□□□□□ -0.71
RTN1YDR233C SAS10Q12136 610 aaPredicted RBP10.57□□□□□ -0.72
RTN1YDR233C VPS29P38759 282 aa10.53□□□□□ -0.72
RTN1YDR233C MAK11P20484 414 aaKnown RBP10.45□□□□□ -0.74
RTN1YDR233C SET1P38827 1080 aaKnown RBP10.43□□□□□ -0.74
RTN1YDR233C TIF4632P39936 914 aaKnown RBP10.41□□□□□ -0.74
RTN1YDR233C STS1P38637 319 aa10.38□□□□□ -0.75
RTN1YDR233C YMR1P47147 688 aaKnown RBP RIP-Chip data10.38□□□□□ -0.75not detected
RTN1YDR233C TGL3P40308 642 aa10.37□□□□□ -0.75
RTN1YDR233C NSR1P27476 414 aaKnown RBP RIP-Chip data10.35□□□□□ -0.75not detected
RTN1YDR233C YPR148CQ06523 435 aa10.33□□□□□ -0.76
RTN1YDR233C DBP1P24784 617 aaKnown RBP10.32□□□□□ -0.76
RTN1YDR233C YFR006WP43590 535 aa10.32□□□□□ -0.76
RTN1YDR233C COQ8P27697 501 aa10.31□□□□□ -0.76
RTN1YDR233C YOR238WQ08634 303 aa10.31□□□□□ -0.76
RTN1YDR233C EDS1P38073 919 aa10.27□□□□□ -0.77
RTN1YDR233C YAP5P40574 245 aa10.25□□□□□ -0.77
RTN1YDR233C LEU3P08638 886 aa10.24□□□□□ -0.77
RTN1YDR233C VPS70P47161 811 aa10.24□□□□□ -0.77
RTN1YDR233C PIB1Q06651 286 aa10.23□□□□□ -0.77
RTN1YDR233C MIF2P35201 549 aa10.22□□□□□ -0.77
RTN1YDR233C IFH1P39520 1085 aa10.22□□□□□ -0.77
RTN1YDR233C NOP53Q12080 455 aaKnown RBP10.17□□□□□ -0.78
RTN1YDR233C LEO1P38439 464 aa10.16□□□□□ -0.78
RTN1YDR233C CKB1P43639 278 aa10.15□□□□□ -0.78
RTN1YDR233C MST1P07236 462 aa10.13□□□□□ -0.79
RTN1YDR233C VMA1P17255 1071 aaKnown RBP10.13□□□□□ -0.79
RTN1YDR233C PTC3P34221 468 aaKnown RBP10.13□□□□□ -0.79
RTN1YDR233C SPB4P25808 606 aaPredicted RBP10.05□□□□□ -0.8
RTN1YDR233C SAM3Q08986 587 aa10.03□□□□□ -0.8
RTN1YDR233C PBS2P08018 668 aa10.01□□□□□ -0.81
RTN1YDR233C DSF2P38213 736 aa10.01□□□□□ -0.81
RTN1YDR233C REF2P42073 533 aaPredicted RBP9.98□□□□□ -0.81
RTN1YDR233C GTT3P39996 337 aa9.96□□□□□ -0.82
RTN1YDR233C GRE2Q12068 342 aaKnown RBP9.96□□□□□ -0.82
RTN1YDR233C ATH1P48016 1211 aa9.94□□□□□ -0.82
RTN1YDR233C GUT1P32190 709 aa9.93□□□□□ -0.82
RTN1YDR233C RPN1P38764 993 aaKnown RBP9.91□□□□□ -0.82
RTN1YDR233C YOL036WQ08206 761 aa9.91□□□□□ -0.82
RTN1YDR233C GYP5Q12344 894 aa9.91□□□□□ -0.82
RTN1YDR233C SOL3P38858 249 aa9.88□□□□□ -0.83
RTN1YDR233C UBP14P38237 781 aaKnown RBP9.86□□□□□ -0.83
RTN1YDR233C VHR2P40041 505 aa9.86□□□□□ -0.83
RTN1YDR233C MAM3Q12296 706 aa9.86□□□□□ -0.83
RTN1YDR233C IES2P40154 320 aa9.85□□□□□ -0.83
RTN1YDR233C SET4P42948 560 aa9.85□□□□□ -0.83
RTN1YDR233C YGR273CP53329 174 aa9.85□□□□□ -0.83
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms