RNA–Protein interactions for RNA: ENSMUST00000210061.1

Clcn4-203, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clcn4, Length 2,445 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-203ENSMUST00000210061 Igsf10Q3V1M1 2594 aa8.13□□□□□ -1.11
Clcn4-203ENSMUST00000210061 Gm16253D3Z167 63 aa8.12□□□□□ -1.11
Clcn4-203ENSMUST00000210061 Ndufb1P0DN34 57 aa8.12□□□□□ -1.11
Clcn4-203ENSMUST00000210061 Znf706Q9D115 76 aaKnown RBP8.12□□□□□ -1.11
Clcn4-203ENSMUST00000210061 Anapc11Q9CPX9 84 aa8.1□□□□□ -1.11
Clcn4-203ENSMUST00000210061 Huwe1Q7TMY8 4377 aaKnown RBP8.1□□□□□ -1.11
Clcn4-203ENSMUST00000210061 Gm10643Q3URG9 111 aa8.09□□□□□ -1.11
Clcn4-203ENSMUST00000210061 Gm17349F7BGH6 99 aa8.08□□□□□ -1.12
Clcn4-203ENSMUST00000210061 Adm2Q7TNK8 150 aa8.08□□□□□ -1.12
Clcn4-203ENSMUST00000210061 NbdyA0A0N4SUI7 68 aa8.07□□□□□ -1.12
Clcn4-203ENSMUST00000210061 Pkd1l1Q8R526 2615 aa8.06□□□□□ -1.12
Clcn4-203ENSMUST00000210061 Gm3646F6S692 53 aa8.05□□□□□ -1.12
Clcn4-203ENSMUST00000210061 Gm21798J3QNU5 87 aa8.05□□□□□ -1.12
Clcn4-203ENSMUST00000210061 Defb39Q70KL3 74 aa8.03□□□□□ -1.12
Clcn4-203ENSMUST00000210061 1700042G07RikB1AUF7 90 aa8.02□□□□□ -1.13
Clcn4-203ENSMUST00000210061 Gm26620Q9CY65 116 aa8.02□□□□□ -1.13
Clcn4-203ENSMUST00000210061 Fras1Q80T14 4010 aa8.01□□□□□ -1.13
Clcn4-203ENSMUST00000210061 Limd2Q8BGB5 128 aa8□□□□□ -1.13
Clcn4-203ENSMUST00000210061 Gm4707V9GXN5 68 aa8□□□□□ -1.13
Clcn4-203ENSMUST00000210061 Defb13Q8R2I4 64 aa8□□□□□ -1.13
Clcn4-203ENSMUST00000210061 TnxbO35452 4006 aa7.98□□□□□ -1.13
Clcn4-203ENSMUST00000210061 Uqcr11Q9CPX8 56 aa7.98□□□□□ -1.13
Clcn4-203ENSMUST00000210061 Tnp2P11378 117 aa7.98□□□□□ -1.13
Clcn4-203ENSMUST00000210061 OxtP35454 125 aa7.97□□□□□ -1.13
Clcn4-203ENSMUST00000210061 1600014C23RikQ9DAX4 101 aa7.97□□□□□ -1.13
Clcn4-203ENSMUST00000210061 PrkdcP97313 4128 aa7.96□□□□□ -1.14
Clcn4-203ENSMUST00000210061 Cypt15B1AXS0 87 aa7.95□□□□□ -1.14
Clcn4-203ENSMUST00000210061 PlecQ9QXS1 4691 aaKnown RBP7.94□□□□□ -1.14
Clcn4-203ENSMUST00000210061 Gpr15lA0A0B4J1N3 78 aa7.94□□□□□ -1.14
Clcn4-203ENSMUST00000210061 Gm9507D3Z5T3 223 aa7.94□□□□□ -1.14
Clcn4-203ENSMUST00000210061 Krtap14O08640 167 aa7.93□□□□□ -1.14
Clcn4-203ENSMUST00000210061 Dnah7cA0A087WR13 4024 aa7.89□□□□□ -1.15
Clcn4-203ENSMUST00000210061 Gm9918Q8BUR5 174 aa7.88□□□□□ -1.15
Clcn4-203ENSMUST00000210061 Spaca4Q80ZQ0 127 aa7.86□□□□□ -1.15
Clcn4-203ENSMUST00000210061 Dnah5Q8VHE6 4621 aa7.86□□□□□ -1.15
Clcn4-203ENSMUST00000210061 Gm10999F6Q4M4 69 aa7.85□□□□□ -1.15
Clcn4-203ENSMUST00000210061 2310050C09RikG5E8Z3 280 aa7.84□□□□□ -1.15
Clcn4-203ENSMUST00000210061 Hectd4E9Q2E4 4418 aa7.84□□□□□ -1.16
Clcn4-203ENSMUST00000210061 Ndufs5Q99LY9 106 aa7.82□□□□□ -1.16
Clcn4-203ENSMUST00000210061 Wfdc3Q14AE4 130 aa7.81□□□□□ -1.16
Clcn4-203ENSMUST00000210061 2310034C09RikQ9D746 214 aa7.78□□□□□ -1.16
Clcn4-203ENSMUST00000210061 Q8BGJ3 129 aa7.78□□□□□ -1.16
Clcn4-203ENSMUST00000210061 Krtap13O88375 197 aa7.77□□□□□ -1.17
Clcn4-203ENSMUST00000210061 Dnah2P0C6F1 4456 aa7.73□□□□□ -1.17
Clcn4-203ENSMUST00000210061 2310079G19RikQ9D6L6 185 aa7.73□□□□□ -1.17
Clcn4-203ENSMUST00000210061 Ly6g6cQ9Z1Q4 126 aa7.73□□□□□ -1.17
Clcn4-203ENSMUST00000210061 Dnah7aE9Q0T8 4024 aa7.73□□□□□ -1.17
Clcn4-203ENSMUST00000210061 Krtap10-4Q08EG8 221 aa7.71□□□□□ -1.17
Clcn4-203ENSMUST00000210061 Vps13dB1ART2 4390 aa7.71□□□□□ -1.18
Clcn4-203ENSMUST00000210061 Stard9Q80TF6 4561 aa7.7□□□□□ -1.18
Clcn4-203ENSMUST00000210061 Defb1P56386 69 aa7.7□□□□□ -1.18
Clcn4-203ENSMUST00000210061 Gm9821Q8K076 103 aa7.66□□□□□ -1.18
Clcn4-203ENSMUST00000210061 Pkd1O08852 4293 aa7.65□□□□□ -1.18
Clcn4-203ENSMUST00000210061 Krtap3-2Q9D638 99 aa7.65□□□□□ -1.18
Clcn4-203ENSMUST00000210061 Krtap3-3Q9D7P0 99 aa7.65□□□□□ -1.18
Clcn4-203ENSMUST00000210061 Lrp1bQ9JI18 4599 aa7.63□□□□□ -1.19
Clcn4-203ENSMUST00000210061 A930033H14RikG5E8X6 103 aa7.62□□□□□ -1.19
Clcn4-203ENSMUST00000210061 4930507D05RikQ8C9C9 103 aa7.61□□□□□ -1.19
Clcn4-203ENSMUST00000210061 ApobE9Q414 4505 aa7.6□□□□□ -1.19
Clcn4-203ENSMUST00000210061 Sec61bQ9CQS8 96 aaKnown RBP7.6□□□□□ -1.19
Clcn4-203ENSMUST00000210061 FcgbpE9Q0B5 2583 aa7.59□□□□□ -1.19
Clcn4-203ENSMUST00000210061 Defb11Q8R2I7 77 aa7.57□□□□□ -1.2
Clcn4-203ENSMUST00000210061 D6Ertd527eA0A0N4SWI3 464 aa7.56□□□□□ -1.2
Clcn4-203ENSMUST00000210061 Pla2g10Q9QXX3 151 aa7.53□□□□□ -1.2
Clcn4-203ENSMUST00000210061 Pkhd1E9PZ36 4059 aa7.52□□□□□ -1.21
Clcn4-203ENSMUST00000210061 Gm4491E0CX42 125 aa7.51□□□□□ -1.21
Clcn4-203ENSMUST00000210061 Krtap10-10A0A1W2P7T6 217 aa7.49□□□□□ -1.21
Clcn4-203ENSMUST00000210061 Gm2696A0A1W2P709 240 aa7.43□□□□□ -1.22
Clcn4-203ENSMUST00000210061 Rps29P62274 56 aa7.41□□□□□ -1.22
Clcn4-203ENSMUST00000210061 SacsQ9JLC8 4582 aa7.38□□□□□ -1.23
Clcn4-203ENSMUST00000210061 Fat2Q5F226 4351 aa7.36□□□□□ -1.23
Clcn4-203ENSMUST00000210061 Gm20537G3UYK7 97 aa7.35□□□□□ -1.23
Clcn4-203ENSMUST00000210061 Cox6b2Q80ZN9 88 aa7.33□□□□□ -1.24
Clcn4-203ENSMUST00000210061 RetnlbQ99P86 105 aa7.29□□□□□ -1.24
Clcn4-203ENSMUST00000210061 Gm3880A0A1B0GSB3 72 aa7.28□□□□□ -1.24
Clcn4-203ENSMUST00000210061 Gm12216A0A1W2P827 62 aa7.28□□□□□ -1.24
Clcn4-203ENSMUST00000210061 Prm2P07978 107 aa7.28□□□□□ -1.24
Clcn4-203ENSMUST00000210061 Fat1A0A1L1SQU7 4645 aa7.27□□□□□ -1.25
Clcn4-203ENSMUST00000210061 Vps13bQ80TY5 3993 aa7.21□□□□□ -1.25
Clcn4-203ENSMUST00000210061 Dync1h1Q9JHU4 4644 aaKnown RBP7.21□□□□□ -1.26
Clcn4-203ENSMUST00000210061 Pkhd1l1Q80ZA4 4249 aa7.15□□□□□ -1.26
Clcn4-203ENSMUST00000210061 Gm5767A0A0J9YTU8 78 aa7.15□□□□□ -1.27
Clcn4-203ENSMUST00000210061 Gm9955Q8CEJ8 102 aa7.14□□□□□ -1.27
Clcn4-203ENSMUST00000210061 2210017I01RikA0A0A6YVV1 95 aa7.13□□□□□ -1.27
Clcn4-203ENSMUST00000210061 Gm10382Q3V0T5 144 aa7.08□□□□□ -1.28
Clcn4-203ENSMUST00000210061 Gm17606F6ZL36 78 aa7.05□□□□□ -1.28
Clcn4-203ENSMUST00000210061 Lrp1Q91ZX7 4545 aaKnown RBP7.05□□□□□ -1.28
Clcn4-203ENSMUST00000210061 CriptO70333 101 aa7.01□□□□□ -1.29
Clcn4-203ENSMUST00000210061 Gm20538F6Z9R1 75 aa7□□□□□ -1.29
Clcn4-203ENSMUST00000210061 Rnase13Q5GAM7 153 aa7□□□□□ -1.29
Clcn4-203ENSMUST00000210061 Ryr3A2AGL3 4863 aa7□□□□□ -1.29
Clcn4-203ENSMUST00000210061 Romo1P60603 79 aa6.97□□□□□ -1.29
Clcn4-203ENSMUST00000210061 Rpl37Q9D823 97 aa6.96□□□□□ -1.3
Clcn4-203ENSMUST00000210061 Krtap15-1Q9QZU5 150 aa6.93□□□□□ -1.3
Clcn4-203ENSMUST00000210061 Mp68P56379 58 aa6.91□□□□□ -1.3
Clcn4-203ENSMUST00000210061 Gm9736A0A1W2P7N1 277 aa6.9□□□□□ -1.3
Clcn4-203ENSMUST00000210061 Krtap19-5O08632 62 aa6.89□□□□□ -1.31
Clcn4-203ENSMUST00000210061 Gm5965D3Z724 196 aa6.88□□□□□ -1.31
Clcn4-203ENSMUST00000210061 Krtap3-1A2A591 98 aa6.87□□□□□ -1.31
Clcn4-203ENSMUST00000210061 Fat3Q8BNA6 4555 aa6.87□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 85.7 ms