RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Muc6Q80T03 2850 aa8.92□□□□□ -0.98
Nup54-201ENSMUST00000038514 Fras1Q80T14 4010 aa8.92□□□□□ -0.98
Nup54-201ENSMUST00000038514 Adm2Q7TNK8 150 aa8.91□□□□□ -0.98
Nup54-201ENSMUST00000038514 SptssbQ925E8 76 aa8.9□□□□□ -0.98
Nup54-201ENSMUST00000038514 TnxbO35452 4006 aa8.9□□□□□ -0.98
Nup54-201ENSMUST00000038514 Gm4707V9GXN5 68 aa8.87□□□□□ -0.99
Nup54-201ENSMUST00000038514 Ndufb1P0DN34 57 aa8.86□□□□□ -0.99
Nup54-201ENSMUST00000038514 Defb39Q70KL3 74 aa8.86□□□□□ -0.99
Nup54-201ENSMUST00000038514 Gm9507D3Z5T3 223 aa8.85□□□□□ -0.99
Nup54-201ENSMUST00000038514 Gm21798J3QNU5 87 aa8.85□□□□□ -0.99
Nup54-201ENSMUST00000038514 Gm10643Q3URG9 111 aa8.85□□□□□ -0.99
Nup54-201ENSMUST00000038514 Tnp2P11378 117 aa8.84□□□□□ -0.99
Nup54-201ENSMUST00000038514 Gm3646F6S692 53 aa8.83□□□□□ -1
Nup54-201ENSMUST00000038514 Sec61gP60060 68 aa8.81□□□□□ -1
Nup54-201ENSMUST00000038514 Gm9918Q8BUR5 174 aa8.8□□□□□ -1
Nup54-201ENSMUST00000038514 PlecQ9QXS1 4691 aaKnown RBP8.8□□□□□ -1
Nup54-201ENSMUST00000038514 1600014C23RikQ9DAX4 101 aa8.8□□□□□ -1
Nup54-201ENSMUST00000038514 Krtap14O08640 167 aa8.79□□□□□ -1
Nup54-201ENSMUST00000038514 Ccdc179J3QM76 67 aa8.78□□□□□ -1
Nup54-201ENSMUST00000038514 Gpr15lA0A0B4J1N3 78 aa8.77□□□□□ -1.01
Nup54-201ENSMUST00000038514 PrkdcP97313 4128 aa8.77□□□□□ -1.01
Nup54-201ENSMUST00000038514 Defb13Q8R2I4 64 aa8.76□□□□□ -1.01
Nup54-201ENSMUST00000038514 Pkd1l1Q8R526 2615 aa8.76□□□□□ -1.01
Nup54-201ENSMUST00000038514 Gm26620Q9CY65 116 aa8.75□□□□□ -1.01
Nup54-201ENSMUST00000038514 1700042G07RikB1AUF7 90 aa8.75□□□□□ -1.01
Nup54-201ENSMUST00000038514 Limd2Q8BGB5 128 aa8.75□□□□□ -1.01
Nup54-201ENSMUST00000038514 9230102O04RikA2ASX7 82 aa8.74□□□□□ -1.01
Nup54-201ENSMUST00000038514 Cypt15B1AXS0 87 aa8.73□□□□□ -1.01
Nup54-201ENSMUST00000038514 Uqcr11Q9CPX8 56 aa8.73□□□□□ -1.01
Nup54-201ENSMUST00000038514 Hectd4E9Q2E4 4418 aa8.7□□□□□ -1.02
Nup54-201ENSMUST00000038514 2310050C09RikG5E8Z3 280 aa8.68□□□□□ -1.02
Nup54-201ENSMUST00000038514 Spaca4Q80ZQ0 127 aa8.65□□□□□ -1.02
Nup54-201ENSMUST00000038514 Dnah5Q8VHE6 4621 aa8.65□□□□□ -1.02
Nup54-201ENSMUST00000038514 Dnah7cA0A087WR13 4024 aa8.64□□□□□ -1.03
Nup54-201ENSMUST00000038514 Dnah2P0C6F1 4456 aa8.61□□□□□ -1.03
Nup54-201ENSMUST00000038514 Gm10999F6Q4M4 69 aa8.61□□□□□ -1.03
Nup54-201ENSMUST00000038514 Krtap13O88375 197 aa8.59□□□□□ -1.03
Nup54-201ENSMUST00000038514 Vps13dB1ART2 4390 aa8.59□□□□□ -1.03
Nup54-201ENSMUST00000038514 Krtap10-4Q08EG8 221 aa8.58□□□□□ -1.04
Nup54-201ENSMUST00000038514 Wfdc3Q14AE4 130 aa8.58□□□□□ -1.04
Nup54-201ENSMUST00000038514 Ly6g6cQ9Z1Q4 126 aa8.55□□□□□ -1.04
Nup54-201ENSMUST00000038514 2310034C09RikQ9D746 214 aa8.54□□□□□ -1.04
Nup54-201ENSMUST00000038514 2310079G19RikQ9D6L6 185 aa8.54□□□□□ -1.04
Nup54-201ENSMUST00000038514 Q8BGJ3 129 aa8.53□□□□□ -1.04
Nup54-201ENSMUST00000038514 FcgbpE9Q0B5 2583 aa8.52□□□□□ -1.05
Nup54-201ENSMUST00000038514 Dnah7aE9Q0T8 4024 aa8.51□□□□□ -1.05
Nup54-201ENSMUST00000038514 Ndufs5Q99LY9 106 aa8.5□□□□□ -1.05
Nup54-201ENSMUST00000038514 Pkd1O08852 4293 aa8.5□□□□□ -1.05
Nup54-201ENSMUST00000038514 ApobE9Q414 4505 aa8.49□□□□□ -1.05
Nup54-201ENSMUST00000038514 Krtap3-2Q9D638 99 aa8.47□□□□□ -1.05
Nup54-201ENSMUST00000038514 Krtap3-3Q9D7P0 99 aa8.47□□□□□ -1.05
Nup54-201ENSMUST00000038514 Defb1P56386 69 aa8.46□□□□□ -1.06
Nup54-201ENSMUST00000038514 Stard9Q80TF6 4561 aa8.45□□□□□ -1.06
Nup54-201ENSMUST00000038514 A930033H14RikG5E8X6 103 aa8.42□□□□□ -1.06
Nup54-201ENSMUST00000038514 Defb11Q8R2I7 77 aa8.4□□□□□ -1.06
Nup54-201ENSMUST00000038514 Lrp1bQ9JI18 4599 aa8.39□□□□□ -1.07
Nup54-201ENSMUST00000038514 Gm9821Q8K076 103 aa8.36□□□□□ -1.07
Nup54-201ENSMUST00000038514 4930507D05RikQ8C9C9 103 aa8.34□□□□□ -1.07
Nup54-201ENSMUST00000038514 Pkhd1E9PZ36 4059 aa8.34□□□□□ -1.07
Nup54-201ENSMUST00000038514 D6Ertd527eA0A0N4SWI3 464 aa8.33□□□□□ -1.08
Nup54-201ENSMUST00000038514 Krtap10-10A0A1W2P7T6 217 aa8.33□□□□□ -1.08
Nup54-201ENSMUST00000038514 Gm4491E0CX42 125 aa8.28□□□□□ -1.08
Nup54-201ENSMUST00000038514 Gm2696A0A1W2P709 240 aa8.27□□□□□ -1.09
Nup54-201ENSMUST00000038514 Pla2g10Q9QXX3 151 aa8.24□□□□□ -1.09
Nup54-201ENSMUST00000038514 OxtP35454 125 aa8.23□□□□□ -1.09
Nup54-201ENSMUST00000038514 Fat2Q5F226 4351 aa8.2□□□□□ -1.1
Nup54-201ENSMUST00000038514 Rps29P62274 56 aa8.19□□□□□ -1.1
Nup54-201ENSMUST00000038514 SacsQ9JLC8 4582 aa8.19□□□□□ -1.1
Nup54-201ENSMUST00000038514 Gm11939A2A592 99 aa8.19□□□□□ -1.1
Nup54-201ENSMUST00000038514 Gm20537G3UYK7 97 aa8.07□□□□□ -1.12
Nup54-201ENSMUST00000038514 Cox6b2Q80ZN9 88 aa8.07□□□□□ -1.12
Nup54-201ENSMUST00000038514 RetnlbQ99P86 105 aa8.07□□□□□ -1.12
Nup54-201ENSMUST00000038514 Fat1A0A1L1SQU7 4645 aa8.05□□□□□ -1.12
Nup54-201ENSMUST00000038514 Dync1h1Q9JHU4 4644 aaKnown RBP8.03□□□□□ -1.12
Nup54-201ENSMUST00000038514 Vps13bQ80TY5 3993 aa8□□□□□ -1.13
Nup54-201ENSMUST00000038514 Pkhd1l1Q80ZA4 4249 aa7.99□□□□□ -1.13
Nup54-201ENSMUST00000038514 Gm3880A0A1B0GSB3 72 aa7.98□□□□□ -1.13
Nup54-201ENSMUST00000038514 Gm12216A0A1W2P827 62 aa7.92□□□□□ -1.14
Nup54-201ENSMUST00000038514 Gm5767A0A0J9YTU8 78 aa7.9□□□□□ -1.14
Nup54-201ENSMUST00000038514 Gm9955Q8CEJ8 102 aa7.83□□□□□ -1.16
Nup54-201ENSMUST00000038514 Gm10382Q3V0T5 144 aa7.79□□□□□ -1.16
Nup54-201ENSMUST00000038514 Lrp1Q91ZX7 4545 aaKnown RBP7.73□□□□□ -1.17
Nup54-201ENSMUST00000038514 Ryr3A2AGL3 4863 aa7.72□□□□□ -1.17
Nup54-201ENSMUST00000038514 Gm17606F6ZL36 78 aa7.71□□□□□ -1.18
Nup54-201ENSMUST00000038514 Rnase13Q5GAM7 153 aa7.71□□□□□ -1.18
Nup54-201ENSMUST00000038514 Gm9736A0A1W2P7N1 277 aa7.69□□□□□ -1.18
Nup54-201ENSMUST00000038514 Krtap19-5O08632 62 aa7.69□□□□□ -1.18
Nup54-201ENSMUST00000038514 Rpl37Q9D823 97 aa7.67□□□□□ -1.18
Nup54-201ENSMUST00000038514 CriptO70333 101 aa7.67□□□□□ -1.18
Nup54-201ENSMUST00000038514 Krtap15-1Q9QZU5 150 aa7.65□□□□□ -1.18
Nup54-201ENSMUST00000038514 Gm5965D3Z724 196 aa7.63□□□□□ -1.19
Nup54-201ENSMUST00000038514 Romo1P60603 79 aa7.62□□□□□ -1.19
Nup54-201ENSMUST00000038514 Krtap3-1A2A591 98 aa7.6□□□□□ -1.19
Nup54-201ENSMUST00000038514 Kmt2cQ8BRH4 4903 aa7.59□□□□□ -1.19
Nup54-201ENSMUST00000038514 Fat3Q8BNA6 4555 aa7.58□□□□□ -1.2
Nup54-201ENSMUST00000038514 Gm17416Q30KP4 66 aa7.57□□□□□ -1.2
Nup54-201ENSMUST00000038514 Mycbp2Q7TPH6 4711 aa7.51□□□□□ -1.21
Nup54-201ENSMUST00000038514 Ryr2E9Q401 4966 aaKnown RBP7.51□□□□□ -1.21
Nup54-201ENSMUST00000038514 Mp68P56379 58 aa7.46□□□□□ -1.21
Nup54-201ENSMUST00000038514 Gm20538F6Z9R1 75 aa7.45□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 69.5 ms