RNA–Protein interactions for RNA: ENSMUST00000030205.13

Ttc39b-201, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

TSL 1 (best) BASIC

Gene Ttc39b, Length 842 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-201ENSMUST00000030205 Cited4Q9WUL8 182 aa10.32□□□□□ -0.76
Ttc39b-201ENSMUST00000030205 Defb47Q30KN1 79 aa10.29□□□□□ -0.76
Ttc39b-201ENSMUST00000030205 C130032M10RikQ8C888 123 aa10.29□□□□□ -0.76
Ttc39b-201ENSMUST00000030205 Rnase13Q5GAM7 153 aa10.28□□□□□ -0.76
Ttc39b-201ENSMUST00000030205 4930524J08RikQ9CUJ5 163 aa10.27□□□□□ -0.77
Ttc39b-201ENSMUST00000030205 Igkv8-19A0A0G2JFN8 121 aa10.26□□□□□ -0.77
Ttc39b-201ENSMUST00000030205 Defa21Q8C1P2 93 aa10.26□□□□□ -0.77
Ttc39b-201ENSMUST00000030205 Gm29423A0A087WRM1 55 aa10.25□□□□□ -0.77
Ttc39b-201ENSMUST00000030205 Tac4Q99N14 128 aa10.23□□□□□ -0.77
Ttc39b-201ENSMUST00000030205 Tma7Q8K003 64 aaKnown RBP10.21□□□□□ -0.77
Ttc39b-201ENSMUST00000030205 Ube2v1Q9CZY3 147 aa10.21□□□□□ -0.77
Ttc39b-201ENSMUST00000030205 P01843 105 aa10.18□□□□□ -0.78
Ttc39b-201ENSMUST00000030205 CenpwQ3URR0 86 aa10.18□□□□□ -0.78
Ttc39b-201ENSMUST00000030205 Gm44790A0A0N4SV91 103 aa10.17□□□□□ -0.78
Ttc39b-201ENSMUST00000030205 Krtap4-6Q3V4B7 195 aa10.15□□□□□ -0.78
Ttc39b-201ENSMUST00000030205 Sprr2jO70561 109 aa10.13□□□□□ -0.79
Ttc39b-201ENSMUST00000030205 Apoc4Q61268 124 aa10.13□□□□□ -0.79
Ttc39b-201ENSMUST00000030205 Lce1jD3YUU5 139 aa10.12□□□□□ -0.79
Ttc39b-201ENSMUST00000030205 Trav14d-3-dv8A0A075B619 120 aa10.1□□□□□ -0.79
Ttc39b-201ENSMUST00000030205 Ctxnd2A0A1B0GQX3 59 aa10.1□□□□□ -0.79
Ttc39b-201ENSMUST00000030205 Chtf8P0CG14 533 aa10.1□□□□□ -0.79
Ttc39b-201ENSMUST00000030205 B930094E09RikQ8C4T2 136 aa10.1□□□□□ -0.79
Ttc39b-201ENSMUST00000030205 Muc5bE9Q5I3 4800 aa10.1□□□□□ -0.79
Ttc39b-201ENSMUST00000030205 Igkv8-27A0A0G2JF28 120 aa10.07□□□□□ -0.8
Ttc39b-201ENSMUST00000030205 Gm20604F8WIA3 75 aa10.06□□□□□ -0.8
Ttc39b-201ENSMUST00000030205 Gm28051J3QMA2 81 aa10.06□□□□□ -0.8
Ttc39b-201ENSMUST00000030205 Scgb1b2O35176 93 aa10.05□□□□□ -0.8
Ttc39b-201ENSMUST00000030205 Tmem213Q08EA8 116 aa10.05□□□□□ -0.8
Ttc39b-201ENSMUST00000030205 UqcrqQ9CQ69 82 aa10.05□□□□□ -0.8
Ttc39b-201ENSMUST00000030205 Smim13E9Q942 88 aa10.03□□□□□ -0.8
Ttc39b-201ENSMUST00000030205 Cby1Q9D1C2 127 aa10.02□□□□□ -0.81
Ttc39b-201ENSMUST00000030205 Reg3aO09037 175 aa10.01□□□□□ -0.81
Ttc39b-201ENSMUST00000030205 BikO70337 150 aa10□□□□□ -0.81
Ttc39b-201ENSMUST00000030205 Cox6cQ9CPQ1 76 aa10□□□□□ -0.81
Ttc39b-201ENSMUST00000030205 Rbm3O89086 153 aaKnown RBP9.99□□□□□ -0.81
Ttc39b-201ENSMUST00000030205 Gm10267M0QWD8 85 aa9.98□□□□□ -0.81
Ttc39b-201ENSMUST00000030205 Mrpl34Q99N91 92 aa9.98□□□□□ -0.81
Ttc39b-201ENSMUST00000030205 Acyp1P56376 99 aa9.97□□□□□ -0.81
Ttc39b-201ENSMUST00000030205 Gm17416Q30KP4 66 aa9.97□□□□□ -0.81
Ttc39b-201ENSMUST00000030205 Krtap4-1Q3UUY3 169 aa9.96□□□□□ -0.82
Ttc39b-201ENSMUST00000030205 Defb13Q8R2I4 64 aa9.96□□□□□ -0.82
Ttc39b-201ENSMUST00000030205 Q9DAA3 117 aa9.94□□□□□ -0.82
Ttc39b-201ENSMUST00000030205 Gm10135F6TEE5 83 aa9.93□□□□□ -0.82
Ttc39b-201ENSMUST00000030205 Gm37013Q8K491 104 aa9.93□□□□□ -0.82
Ttc39b-201ENSMUST00000030205 Ccl17F6R5P4 103 aa9.91□□□□□ -0.82
Ttc39b-201ENSMUST00000030205 Krtap13-1Q8K198 168 aa9.91□□□□□ -0.82
Ttc39b-201ENSMUST00000030205 Krtap3-2Q9D638 99 aa9.91□□□□□ -0.82
Ttc39b-201ENSMUST00000030205 Krtap3-3Q9D7P0 99 aa9.91□□□□□ -0.82
Ttc39b-201ENSMUST00000030205 Gm28539A0A087WSL9 92 aa9.9□□□□□ -0.82
Ttc39b-201ENSMUST00000030205 NrepQ07475 68 aa9.86□□□□□ -0.83
Ttc39b-201ENSMUST00000030205 Mdn1A2ANY6 5589 aaKnown RBP9.86□□□□□ -0.83
Ttc39b-201ENSMUST00000030205 Krtap9-5A2A5X3 358 aa9.81□□□□□ -0.84
Ttc39b-201ENSMUST00000030205 Krtap19-2Q925I0 141 aa9.79□□□□□ -0.84
Ttc39b-201ENSMUST00000030205 Pde6gP09174 87 aa9.78□□□□□ -0.84
Ttc39b-201ENSMUST00000030205 Spink13Q3UTS8 97 aa9.78□□□□□ -0.84
Ttc39b-201ENSMUST00000030205 Gm11564A2A4L9 201 aa9.76□□□□□ -0.85
Ttc39b-201ENSMUST00000030205 Gm11563B1AQ90 168 aa9.76□□□□□ -0.85
Ttc39b-201ENSMUST00000030205 Gm11595B1AQA7 289 aa9.76□□□□□ -0.85
Ttc39b-201ENSMUST00000030205 Krtap4-8B1AQA8 209 aa9.76□□□□□ -0.85
Ttc39b-201ENSMUST00000030205 Krtap1-5A2A590 122 aa9.75□□□□□ -0.85
Ttc39b-201ENSMUST00000030205 Cox7cP17665 63 aa9.75□□□□□ -0.85
Ttc39b-201ENSMUST00000030205 Lyrm7Q9DA03 104 aa9.72□□□□□ -0.85
Ttc39b-201ENSMUST00000030205 Gm4491E0CX42 125 aa9.71□□□□□ -0.86
Ttc39b-201ENSMUST00000030205 MturnQ8CGA4 131 aa9.58□□□□□ -0.88
Ttc39b-201ENSMUST00000030205 2210017I01RikA0A0A6YVV1 95 aa9.57□□□□□ -0.88
Ttc39b-201ENSMUST00000030205 BtcQ05928 177 aa9.56□□□□□ -0.88
Ttc39b-201ENSMUST00000030205 2310079G19RikQ9D6L6 185 aa9.52□□□□□ -0.89
Ttc39b-201ENSMUST00000030205 Ormdl1Q921I0 153 aa9.51□□□□□ -0.89
Ttc39b-201ENSMUST00000030205 Krtap12-1Q9Z287 130 aa9.49□□□□□ -0.89
Ttc39b-201ENSMUST00000030205 Naa38Q9D2U5 125 aa9.47□□□□□ -0.89
Ttc39b-201ENSMUST00000030205 Krtap4-9B1AQA9 244 aa9.45□□□□□ -0.9
Ttc39b-201ENSMUST00000030205 Gm6358A0A087WPH4 74 aa9.43□□□□□ -0.9
Ttc39b-201ENSMUST00000030205 MplkipQ9D011 178 aa9.42□□□□□ -0.9
Ttc39b-201ENSMUST00000030205 Fam229bQ8CF36 80 aa9.4□□□□□ -0.9
Ttc39b-201ENSMUST00000030205 Pla2g10Q9QXX3 151 aa9.39□□□□□ -0.91
Ttc39b-201ENSMUST00000030205 9230102O04RikA2ASX7 82 aa9.37□□□□□ -0.91
Ttc39b-201ENSMUST00000030205 Xcl1P47993 114 aa9.37□□□□□ -0.91
Ttc39b-201ENSMUST00000030205 Gm19426M0QWC7 77 aa9.33□□□□□ -0.92
Ttc39b-201ENSMUST00000030205 Fsip2A2ARZ3 6995 aa9.29□□□□□ -0.92
Ttc39b-201ENSMUST00000030205 Prm2P07978 107 aa9.26□□□□□ -0.93
Ttc39b-201ENSMUST00000030205 Mt4P47945 62 aa9.26□□□□□ -0.93
Ttc39b-201ENSMUST00000030205 Q8BGJ3 129 aa9.25□□□□□ -0.93
Ttc39b-201ENSMUST00000030205 Gm11027G8JL69 66 aa9.24□□□□□ -0.93
Ttc39b-201ENSMUST00000030205 Ubl5Q9EPV8 73 aa9.24□□□□□ -0.93
Ttc39b-201ENSMUST00000030205 Prr15lQ8JZM2 100 aa9.21□□□□□ -0.94
Ttc39b-201ENSMUST00000030205 Gm10999F6Q4M4 69 aa9.19□□□□□ -0.94
Ttc39b-201ENSMUST00000030205 BatfO35284 125 aa9.19□□□□□ -0.94
Ttc39b-201ENSMUST00000030205 Pcp4l1Q6W8Q3 68 aa9.19□□□□□ -0.94
Ttc39b-201ENSMUST00000030205 A0A286YE49 62 aa9.18□□□□□ -0.94
Ttc39b-201ENSMUST00000030205 Tmem254aP0DN89 123 aa9.18□□□□□ -0.94
Ttc39b-201ENSMUST00000030205 Tmem254bP0DN90 123 aa9.18□□□□□ -0.94
Ttc39b-201ENSMUST00000030205 Tmem254cP0DN91 123 aa9.18□□□□□ -0.94
Ttc39b-201ENSMUST00000030205 Defb38Q7TNV7 63 aa9.18□□□□□ -0.94
Ttc39b-201ENSMUST00000030205 Tax1bp3Q9DBG9 124 aa9.18□□□□□ -0.94
Ttc39b-201ENSMUST00000030205 Samd13D3YUG0 102 aa9.17□□□□□ -0.94
Ttc39b-201ENSMUST00000030205 Krtap19-9aF8WH65 55 aa9.17□□□□□ -0.94
Ttc39b-201ENSMUST00000030205 Gm26602M0QWA4 95 aa9.17□□□□□ -0.94
Ttc39b-201ENSMUST00000030205 Gm26920S4R2A5 56 aa9.17□□□□□ -0.94
Ttc39b-201ENSMUST00000030205 Krtap6-3A0A087WQL6 57 aa9.12□□□□□ -0.95
Ttc39b-201ENSMUST00000030205 Trav3-1Q5R1I8 114 aa9.11□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 105 ms