RNA–Protein interactions for RNA: ENSMUST00000110522.9

Trim9-202, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-202ENSMUST00000110522 Smg1Q8BKX6 3658 aaKnown RBP7.4□□□□□ -1.23
Trim9-202ENSMUST00000110522 Muc5acE9QAQ8 3455 aa7.4□□□□□ -1.23
Trim9-202ENSMUST00000110522 Znf414Q9DCK4 299 aa7.39□□□□□ -1.23
Trim9-202ENSMUST00000110522 Phxr5P08399 672 aa7.38□□□□□ -1.23
Trim9-202ENSMUST00000110522 7530416G11RikJ3QJX6 159 aa7.37□□□□□ -1.23
Trim9-202ENSMUST00000110522 SptssbQ925E8 76 aa7.37□□□□□ -1.23
Trim9-202ENSMUST00000110522 Igkv8-28A0A0G2JE47 121 aa7.37□□□□□ -1.23
Trim9-202ENSMUST00000110522 Q8BT88 171 aa7.36□□□□□ -1.23
Trim9-202ENSMUST00000110522 Gm5617Q91VN2 117 aa7.36□□□□□ -1.23
Trim9-202ENSMUST00000110522 Plac8Q9JI48 112 aa7.36□□□□□ -1.23
Trim9-202ENSMUST00000110522 Ighv2-2A0A075B5P8 116 aa7.35□□□□□ -1.23
Trim9-202ENSMUST00000110522 H2al1bA0A087WP11 105 aa7.35□□□□□ -1.23
Trim9-202ENSMUST00000110522 P01821 116 aa7.35□□□□□ -1.23
Trim9-202ENSMUST00000110522 Smim29Q8R043 75 aa7.35□□□□□ -1.23
Trim9-202ENSMUST00000110522 Pdzd2E9Q1M1 2796 aa7.35□□□□□ -1.23
Trim9-202ENSMUST00000110522 Gm10308Q9CVR5 141 aa7.34□□□□□ -1.23
Trim9-202ENSMUST00000110522 Gm11213A0A1B0GR83 88 aa7.34□□□□□ -1.23
Trim9-202ENSMUST00000110522 Gm10570F6VB42 170 aa7.34□□□□□ -1.23
Trim9-202ENSMUST00000110522 Coa6Q8BGD8 79 aa7.34□□□□□ -1.23
Trim9-202ENSMUST00000110522 Rpl37aP61514 92 aa7.33□□□□□ -1.24
Trim9-202ENSMUST00000110522 Chchd10Q7TNL9 138 aa7.33□□□□□ -1.24
Trim9-202ENSMUST00000110522 AI606181Q8C7B9 129 aa7.33□□□□□ -1.24
Trim9-202ENSMUST00000110522 Helz2E9QAM5 2947 aaKnown RBP7.33□□□□□ -1.24
Trim9-202ENSMUST00000110522 Krtap16-1A2A5X5 502 aa7.32□□□□□ -1.24
Trim9-202ENSMUST00000110522 A330070K13RikQ8CA53 115 aa7.31□□□□□ -1.24
Trim9-202ENSMUST00000110522 Serp1Q9Z1W5 66 aa7.3□□□□□ -1.24
Trim9-202ENSMUST00000110522 Igkv8-19A0A0G2JFN8 121 aa7.3□□□□□ -1.24
Trim9-202ENSMUST00000110522 Zfhx3Q61329 3726 aa7.3□□□□□ -1.24
Trim9-202ENSMUST00000110522 Tenm4Q3UHK6 2771 aa7.3□□□□□ -1.24
Trim9-202ENSMUST00000110522 H2al1aQ5M8Q2 105 aa7.29□□□□□ -1.24
Trim9-202ENSMUST00000110522 H2al1eQ810S6 105 aa7.29□□□□□ -1.24
Trim9-202ENSMUST00000110522 Lama5Q61001 3718 aa7.29□□□□□ -1.24
Trim9-202ENSMUST00000110522 Gm10320E9PW43 113 aa7.29□□□□□ -1.24
Trim9-202ENSMUST00000110522 Spaca4Q80ZQ0 127 aa7.28□□□□□ -1.24
Trim9-202ENSMUST00000110522 A930002H24RikQ8C8Y3 163 aa7.28□□□□□ -1.24
Trim9-202ENSMUST00000110522 CnbpP53996 178 aaKnown RBP7.27□□□□□ -1.25
Trim9-202ENSMUST00000110522 Ndufs5Q99LY9 106 aa7.27□□□□□ -1.25
Trim9-202ENSMUST00000110522 Gm27235Q3UW50 83 aa7.27□□□□□ -1.25
Trim9-202ENSMUST00000110522 Defb9Q8R2I6 67 aa7.27□□□□□ -1.25
Trim9-202ENSMUST00000110522 Gpr15lA0A0B4J1N3 78 aa7.26□□□□□ -1.25
Trim9-202ENSMUST00000110522 Gm7276Q3TYW4 209 aa7.25□□□□□ -1.25
Trim9-202ENSMUST00000110522 Anapc11Q9CPX9 84 aa7.24□□□□□ -1.25
Trim9-202ENSMUST00000110522 Gm9508A0A1W2P7W0 230 aa7.24□□□□□ -1.25
Trim9-202ENSMUST00000110522 Gm10197F6QEY5 67 aa7.23□□□□□ -1.25
Trim9-202ENSMUST00000110522 Fam229bQ8CF36 80 aa7.23□□□□□ -1.25
Trim9-202ENSMUST00000110522 Srrm2Q8BTI8 2703 aaKnown RBP7.22□□□□□ -1.25
Trim9-202ENSMUST00000110522 RetnlbQ99P86 105 aa7.22□□□□□ -1.25
Trim9-202ENSMUST00000110522 Gm884A2A9H6 3643 aa7.21□□□□□ -1.26
Trim9-202ENSMUST00000110522 ApcQ61315 2845 aa7.2□□□□□ -1.26
Trim9-202ENSMUST00000110522 AW011738F6S7Q2 159 aa7.2□□□□□ -1.26
Trim9-202ENSMUST00000110522 Gm10160F6Y577 67 aa7.2□□□□□ -1.26
Trim9-202ENSMUST00000110522 Sec61gP60060 68 aa7.19□□□□□ -1.26
Trim9-202ENSMUST00000110522 A530084C06RikQ3UTW2 186 aa7.18□□□□□ -1.26
Trim9-202ENSMUST00000110522 Gm17349F7BGH6 99 aa7.17□□□□□ -1.26
Trim9-202ENSMUST00000110522 Gm10337F7DEP7 55 aa7.17□□□□□ -1.26
Trim9-202ENSMUST00000110522 Ndufb1P0DN34 57 aa7.17□□□□□ -1.26
Trim9-202ENSMUST00000110522 FcgbpE9Q0B5 2583 aa7.15□□□□□ -1.26
Trim9-202ENSMUST00000110522 Zcchc13Q9D548 170 aa7.15□□□□□ -1.26
Trim9-202ENSMUST00000110522 Rps28P62858 69 aaKnown RBP7.15□□□□□ -1.27
Trim9-202ENSMUST00000110522 Sox16Q62247 57 aa7.15□□□□□ -1.27
Trim9-202ENSMUST00000110522 Fam104aA2A6P4 185 aa7.15□□□□□ -1.27
Trim9-202ENSMUST00000110522 SvipQ3UZP4 77 aa7.15□□□□□ -1.27
Trim9-202ENSMUST00000110522 Bean1Q9EQG5 255 aa7.13□□□□□ -1.27
Trim9-202ENSMUST00000110522 9230102O04RikA2ASX7 82 aa7.13□□□□□ -1.27
Trim9-202ENSMUST00000110522 Gm10999F6Q4M4 69 aa7.13□□□□□ -1.27
Trim9-202ENSMUST00000110522 OtogO55225 2910 aa7.13□□□□□ -1.27
Trim9-202ENSMUST00000110522 Cystm1Q8K353 104 aa7.12□□□□□ -1.27
Trim9-202ENSMUST00000110522 Spint4Q9D263 159 aa7.12□□□□□ -1.27
Trim9-202ENSMUST00000110522 TgO08710 2766 aa7.11□□□□□ -1.27
Trim9-202ENSMUST00000110522 Muc4Q8JZM8 3443 aa7.09□□□□□ -1.27
Trim9-202ENSMUST00000110522 Svep1A2AVA0 3567 aa7.08□□□□□ -1.28
Trim9-202ENSMUST00000110522 Coa5Q99M07 74 aa7.07□□□□□ -1.28
Trim9-202ENSMUST00000110522 Sprr1aQ62266 144 aa7.06□□□□□ -1.28
Trim9-202ENSMUST00000110522 Cypt15B1AXS0 87 aa7.03□□□□□ -1.28
Trim9-202ENSMUST00000110522 Defb1P56386 69 aa7.03□□□□□ -1.28
Trim9-202ENSMUST00000110522 Q8BGJ3 129 aa7.02□□□□□ -1.28
Trim9-202ENSMUST00000110522 A730071L15RikQ8C4X0 137 aa7.02□□□□□ -1.29
Trim9-202ENSMUST00000110522 Gm10065F6TJM2 114 aa7.02□□□□□ -1.29
Trim9-202ENSMUST00000110522 H2al1kJ3QP08 105 aa7.02□□□□□ -1.29
Trim9-202ENSMUST00000110522 Cdc42se1Q8BHL7 80 aa7.01□□□□□ -1.29
Trim9-202ENSMUST00000110522 Gm9507D3Z5T3 223 aa7□□□□□ -1.29
Trim9-202ENSMUST00000110522 OxtP35454 125 aa7□□□□□ -1.29
Trim9-202ENSMUST00000110522 NbdyA0A0N4SUI7 68 aa6.99□□□□□ -1.29
Trim9-202ENSMUST00000110522 Gm20661K7N787 53 aa6.99□□□□□ -1.29
Trim9-202ENSMUST00000110522 Chtf8P0CG14 533 aa6.99□□□□□ -1.29
Trim9-202ENSMUST00000110522 6030445D17RikE9Q8F9 148 aa6.98□□□□□ -1.29
Trim9-202ENSMUST00000110522 H2al1mQ9DAD9 105 aa6.94□□□□□ -1.3
Trim9-202ENSMUST00000110522 Tenm1Q9WTS4 2731 aa6.94□□□□□ -1.3
Trim9-202ENSMUST00000110522 Gm10139O88245 57 aa6.93□□□□□ -1.3
Trim9-202ENSMUST00000110522 Cmya5Q70KF4 3739 aa6.93□□□□□ -1.3
Trim9-202ENSMUST00000110522 Cypt14J3QPF7 87 aa6.93□□□□□ -1.3
Trim9-202ENSMUST00000110522 Krtap10-4Q08EG8 221 aa6.9□□□□□ -1.3
Trim9-202ENSMUST00000110522 4930507D05RikQ8C9C9 103 aa6.9□□□□□ -1.3
Trim9-202ENSMUST00000110522 Odf3bQ5M8M2 238 aa6.89□□□□□ -1.31
Trim9-202ENSMUST00000110522 2310061N02RikQ9D6S9 174 aa6.89□□□□□ -1.31
Trim9-202ENSMUST00000110522 Phxr4P15974 95 aa6.88□□□□□ -1.31
Trim9-202ENSMUST00000110522 Limd2Q8BGB5 128 aa6.86□□□□□ -1.31
Trim9-202ENSMUST00000110522 Gm17606F6ZL36 78 aa6.85□□□□□ -1.31
Trim9-202ENSMUST00000110522 Krtap13O88375 197 aa6.84□□□□□ -1.31
Trim9-202ENSMUST00000110522 2310050C09RikG5E8Z3 280 aa6.83□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 92.2 ms