RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Phf5aP83870 110 aaKnown RBP9.36□□□□□ -0.91
Nup88-202ENSMUST00000108530 Fam229bQ8CF36 80 aa9.36□□□□□ -0.91
Nup88-202ENSMUST00000108530 Zcchc13Q9D548 170 aa9.36□□□□□ -0.91
Nup88-202ENSMUST00000108530 Serp2Q6TAW2 65 aa9.35□□□□□ -0.91
Nup88-202ENSMUST00000108530 Ormdl1Q921I0 153 aa9.33□□□□□ -0.92
Nup88-202ENSMUST00000108530 Ube2bP63147 152 aa9.31□□□□□ -0.92
Nup88-202ENSMUST00000108530 Ighv2-2A0A075B5P8 116 aa9.3□□□□□ -0.92
Nup88-202ENSMUST00000108530 Ighv2-5A0A0A6YY69 116 aa9.3□□□□□ -0.92
Nup88-202ENSMUST00000108530 P01821 116 aa9.3□□□□□ -0.92
Nup88-202ENSMUST00000108530 Defb9Q8R2I6 67 aa9.3□□□□□ -0.92
Nup88-202ENSMUST00000108530 Gm10308Q9CVR5 141 aa9.3□□□□□ -0.92
Nup88-202ENSMUST00000108530 Ubl5Q9EPV8 73 aa9.3□□□□□ -0.92
Nup88-202ENSMUST00000108530 Fam104aA2A6P4 185 aa9.29□□□□□ -0.92
Nup88-202ENSMUST00000108530 Defa28D3Z1V9 94 aa9.29□□□□□ -0.92
Nup88-202ENSMUST00000108530 A730071L15RikQ8C4X0 137 aa9.28□□□□□ -0.92
Nup88-202ENSMUST00000108530 B230307C23RikQ8BLB2 64 aa9.27□□□□□ -0.93
Nup88-202ENSMUST00000108530 Gm17689B3GLJ4 109 aa9.27□□□□□ -0.93
Nup88-202ENSMUST00000108530 Vpreb2P13373 142 aa9.27□□□□□ -0.93
Nup88-202ENSMUST00000108530 A930002H24RikQ8C8Y3 163 aa9.27□□□□□ -0.93
Nup88-202ENSMUST00000108530 Wfdc13Q5DQQ6 81 aa9.26□□□□□ -0.93
Nup88-202ENSMUST00000108530 A830005F24RikQ8BRT5 167 aa9.26□□□□□ -0.93
Nup88-202ENSMUST00000108530 Vps13dB1ART2 4390 aa9.25□□□□□ -0.93
Nup88-202ENSMUST00000108530 Igkv8-28A0A0G2JE47 121 aa9.24□□□□□ -0.93
Nup88-202ENSMUST00000108530 Vpreb3D3Z6J4 130 aa9.24□□□□□ -0.93
Nup88-202ENSMUST00000108530 Gm10065F6TJM2 114 aa9.24□□□□□ -0.93
Nup88-202ENSMUST00000108530 Rbm3O89086 153 aaKnown RBP9.24□□□□□ -0.93
Nup88-202ENSMUST00000108530 Fam19a3Q7TPG6 132 aa9.24□□□□□ -0.93
Nup88-202ENSMUST00000108530 Vpreb1P13372 142 aa9.23□□□□□ -0.93
Nup88-202ENSMUST00000108530 1600014C23RikQ9DAX4 101 aa9.23□□□□□ -0.93
Nup88-202ENSMUST00000108530 Igkv1-110A0A0B4J1I0 119 aa9.22□□□□□ -0.93
Nup88-202ENSMUST00000108530 Inafm2A0A1L1STD6 152 aa9.22□□□□□ -0.93
Nup88-202ENSMUST00000108530 P06320 134 aa9.22□□□□□ -0.93
Nup88-202ENSMUST00000108530 GhrhP16043 103 aa9.22□□□□□ -0.93
Nup88-202ENSMUST00000108530 Tmem258P61166 79 aa9.22□□□□□ -0.93
Nup88-202ENSMUST00000108530 Wfdc10Q3V2J9 124 aa9.22□□□□□ -0.93
Nup88-202ENSMUST00000108530 Krtap29-1A2A5X4 342 aa9.21□□□□□ -0.93
Nup88-202ENSMUST00000108530 Gm17521F6QAC8 156 aa9.21□□□□□ -0.93
Nup88-202ENSMUST00000108530 Gm10570F6VB42 170 aa9.21□□□□□ -0.93
Nup88-202ENSMUST00000108530 6030445D17RikE9Q8F9 148 aa9.21□□□□□ -0.94
Nup88-202ENSMUST00000108530 BikO70337 150 aa9.21□□□□□ -0.94
Nup88-202ENSMUST00000108530 Gm37389A0A0A6YW05 95 aa9.2□□□□□ -0.94
Nup88-202ENSMUST00000108530 Sfta2E9PXB6 77 aa9.19□□□□□ -0.94
Nup88-202ENSMUST00000108530 Cox6a2P43023 97 aa9.19□□□□□ -0.94
Nup88-202ENSMUST00000108530 Gm10401E9Q3K6 71 aa9.17□□□□□ -0.94
Nup88-202ENSMUST00000108530 Gm19935A0A1B0GSF9 52 aa9.16□□□□□ -0.94
Nup88-202ENSMUST00000108530 Krtap10-10A0A1W2P7T6 217 aa9.16□□□□□ -0.94
Nup88-202ENSMUST00000108530 Samd13D3YUG0 102 aa9.16□□□□□ -0.94
Nup88-202ENSMUST00000108530 Rps28P62858 69 aaKnown RBP9.16□□□□□ -0.94
Nup88-202ENSMUST00000108530 Brk1Q91VR8 75 aa9.16□□□□□ -0.94
Nup88-202ENSMUST00000108530 Gm10642Q3TWM1 71 aa9.16□□□□□ -0.94
Nup88-202ENSMUST00000108530 SnurfQ9WU12 71 aa9.16□□□□□ -0.94
Nup88-202ENSMUST00000108530 Ube2aQ9Z255 152 aa9.16□□□□□ -0.94
Nup88-202ENSMUST00000108530 Stard9Q80TF6 4561 aa9.16□□□□□ -0.94
Nup88-202ENSMUST00000108530 Gm10139O88245 57 aa9.15□□□□□ -0.94
Nup88-202ENSMUST00000108530 Adm2Q7TNK8 150 aa9.15□□□□□ -0.94
Nup88-202ENSMUST00000108530 OxtP35454 125 aa9.15□□□□□ -0.95
Nup88-202ENSMUST00000108530 Gm2696A0A1W2P709 240 aa9.14□□□□□ -0.95
Nup88-202ENSMUST00000108530 Smlr1J3QMJ4 66 aa9.14□□□□□ -0.95
Nup88-202ENSMUST00000108530 A330070K13RikQ8CA53 115 aa9.14□□□□□ -0.95
Nup88-202ENSMUST00000108530 Pde6gP09174 87 aa9.13□□□□□ -0.95
Nup88-202ENSMUST00000108530 1700018G05RikA0A1B0GSI2 66 aa9.13□□□□□ -0.95
Nup88-202ENSMUST00000108530 Dnah2P0C6F1 4456 aa9.13□□□□□ -0.95
Nup88-202ENSMUST00000108530 AI606181Q8C7B9 129 aa9.12□□□□□ -0.95
Nup88-202ENSMUST00000108530 Sprr2jO70561 109 aa9.11□□□□□ -0.95
Nup88-202ENSMUST00000108530 Pkd1O08852 4293 aa9.11□□□□□ -0.95
Nup88-202ENSMUST00000108530 Krtap13O88375 197 aa9.1□□□□□ -0.95
Nup88-202ENSMUST00000108530 Igkv3-7A0A0G2JE31 119 aa9.09□□□□□ -0.95
Nup88-202ENSMUST00000108530 Ryr3A2AGL3 4863 aa9.09□□□□□ -0.95
Nup88-202ENSMUST00000108530 Gm27235Q3UW50 83 aa9.08□□□□□ -0.96
Nup88-202ENSMUST00000108530 Q8BT88 171 aa9.08□□□□□ -0.96
Nup88-202ENSMUST00000108530 Odf3bQ5M8M2 238 aa9.07□□□□□ -0.96
Nup88-202ENSMUST00000108530 Gpr15lA0A0B4J1N3 78 aa9.06□□□□□ -0.96
Nup88-202ENSMUST00000108530 NbdyA0A0N4SUI7 68 aa9.06□□□□□ -0.96
Nup88-202ENSMUST00000108530 Gm44790A0A0N4SV91 103 aa9.05□□□□□ -0.96
Nup88-202ENSMUST00000108530 Igkv3-5A0A140T8M6 119 aa9.05□□□□□ -0.96
Nup88-202ENSMUST00000108530 Ndufc1Q9CQY9 76 aa9.05□□□□□ -0.96
Nup88-202ENSMUST00000108530 C130032M10RikQ8C888 123 aa9.04□□□□□ -0.96
Nup88-202ENSMUST00000108530 Krtap14O08640 167 aa9.04□□□□□ -0.96
Nup88-202ENSMUST00000108530 Prr15lQ8JZM2 100 aa9.02□□□□□ -0.96
Nup88-202ENSMUST00000108530 ApobE9Q414 4505 aa9.02□□□□□ -0.97
Nup88-202ENSMUST00000108530 Q8K1L6 76 aa9.01□□□□□ -0.97
Nup88-202ENSMUST00000108530 Mrpl34Q99N91 92 aa9.01□□□□□ -0.97
Nup88-202ENSMUST00000108530 Anapc11Q9CPX9 84 aa9.01□□□□□ -0.97
Nup88-202ENSMUST00000108530 Igkv3-4A0A140T8Q4 119 aa9.01□□□□□ -0.97
Nup88-202ENSMUST00000108530 Gm28230A0A0A0MQ91 144 aa9□□□□□ -0.97
Nup88-202ENSMUST00000108530 Gm12353A2AGJ4 60 aa8.99□□□□□ -0.97
Nup88-202ENSMUST00000108530 Gm28374F6SG70 93 aa8.99□□□□□ -0.97
Nup88-202ENSMUST00000108530 Tnp2P11378 117 aa8.98□□□□□ -0.97
Nup88-202ENSMUST00000108530 Fat1A0A1L1SQU7 4645 aa8.97□□□□□ -0.97
Nup88-202ENSMUST00000108530 Pet100P0DJE0 76 aa8.97□□□□□ -0.97
Nup88-202ENSMUST00000108530 Lrp1bQ9JI18 4599 aa8.96□□□□□ -0.97
Nup88-202ENSMUST00000108530 Hectd4E9Q2E4 4418 aa8.96□□□□□ -0.98
Nup88-202ENSMUST00000108530 Serp1Q9Z1W5 66 aa8.95□□□□□ -0.98
Nup88-202ENSMUST00000108530 H2al1aQ5M8Q2 105 aa8.95□□□□□ -0.98
Nup88-202ENSMUST00000108530 Dync1h1Q9JHU4 4644 aaKnown RBP8.95□□□□□ -0.98
Nup88-202ENSMUST00000108530 Gm21886J3QJU9 214 aa8.94□□□□□ -0.98
Nup88-202ENSMUST00000108530 Spink8Q09TK9 105 aa8.94□□□□□ -0.98
Nup88-202ENSMUST00000108530 Chchd10Q7TNL9 138 aa8.93□□□□□ -0.98
Nup88-202ENSMUST00000108530 UqcrqQ9CQ69 82 aa8.93□□□□□ -0.98
Nup88-202ENSMUST00000108530 Igkv3-10A0A0G2JGN0 119 aa8.92□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 105.6 ms