RNA–Protein interactions for RNA: ENSMUST00000088790.8

Ret-202, Transcript of Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ret, Length 4,497 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ret-202ENSMUST00000088790 Gm11213A0A1B0GR83 88 aa10.35□□□□□ -0.75
Ret-202ENSMUST00000088790 Gpr15lA0A0B4J1N3 78 aa10.34□□□□□ -0.75
Ret-202ENSMUST00000088790 Nbeal2Q6ZQA0 2742 aa10.34□□□□□ -0.75
Ret-202ENSMUST00000088790 Spaca4Q80ZQ0 127 aa10.33□□□□□ -0.76
Ret-202ENSMUST00000088790 Pkd1l1Q8R526 2615 aa10.33□□□□□ -0.76
Ret-202ENSMUST00000088790 Gm7138L7N2C3 230 aa10.33□□□□□ -0.76
Ret-202ENSMUST00000088790 Gm3238W4VSP7 230 aa10.33□□□□□ -0.76
Ret-202ENSMUST00000088790 Tep1P97499 2629 aa10.33□□□□□ -0.76
Ret-202ENSMUST00000088790 NbeaQ9EPN1 2936 aa10.33□□□□□ -0.76
Ret-202ENSMUST00000088790 Brca2P97929 3329 aa10.33□□□□□ -0.76
Ret-202ENSMUST00000088790 Adgrg4B7ZCC9 3073 aa10.32□□□□□ -0.76
Ret-202ENSMUST00000088790 Col6a3E9PWQ3 3284 aa10.32□□□□□ -0.76
Ret-202ENSMUST00000088790 Hivep1Q03172 2688 aa10.3□□□□□ -0.76
Ret-202ENSMUST00000088790 H2al1mQ9DAD9 105 aa10.29□□□□□ -0.76
Ret-202ENSMUST00000088790 Tex15F8VPN2 2785 aa10.27□□□□□ -0.77
Ret-202ENSMUST00000088790 Stab2Q8R4U0 2559 aa10.26□□□□□ -0.77
Ret-202ENSMUST00000088790 Gm10999F6Q4M4 69 aa10.26□□□□□ -0.77
Ret-202ENSMUST00000088790 Phxr5P08399 672 aa10.26□□□□□ -0.77
Ret-202ENSMUST00000088790 Defb9Q8R2I6 67 aa10.25□□□□□ -0.77
Ret-202ENSMUST00000088790 Cdc42se1Q8BHL7 80 aa10.25□□□□□ -0.77
Ret-202ENSMUST00000088790 Gm7137J3QMW1 236 aa10.24□□□□□ -0.77
Ret-202ENSMUST00000088790 Coa5Q99M07 74 aa10.23□□□□□ -0.77
Ret-202ENSMUST00000088790 DspE9Q557 2883 aaKnown RBP10.22□□□□□ -0.77
Ret-202ENSMUST00000088790 Smim29Q8R043 75 aa10.22□□□□□ -0.77
Ret-202ENSMUST00000088790 Plac8Q9JI48 112 aa10.22□□□□□ -0.77
Ret-202ENSMUST00000088790 9530053A07RikE9PVG8 2581 aa10.22□□□□□ -0.77
Ret-202ENSMUST00000088790 Utp20Q5XG71 2788 aaKnown RBP10.21□□□□□ -0.77
Ret-202ENSMUST00000088790 FlncQ8VHX6 2726 aaKnown RBP10.21□□□□□ -0.78
Ret-202ENSMUST00000088790 Fam104aA2A6P4 185 aa10.2□□□□□ -0.78
Ret-202ENSMUST00000088790 Gm10320E9PW43 113 aa10.19□□□□□ -0.78
Ret-202ENSMUST00000088790 Zcchc13Q9D548 170 aa10.19□□□□□ -0.78
Ret-202ENSMUST00000088790 Limd2Q8BGB5 128 aa10.18□□□□□ -0.78
Ret-202ENSMUST00000088790 Fam229bQ8CF36 80 aa10.18□□□□□ -0.78
Ret-202ENSMUST00000088790 VcanQ62059 3357 aa10.16□□□□□ -0.78
Ret-202ENSMUST00000088790 Gm20661K7N787 53 aa10.15□□□□□ -0.79
Ret-202ENSMUST00000088790 RetnlbQ99P86 105 aa10.13□□□□□ -0.79
Ret-202ENSMUST00000088790 Anapc11Q9CPX9 84 aa10.12□□□□□ -0.79
Ret-202ENSMUST00000088790 Dchs2A0A0A6YW72 3346 aa10.12□□□□□ -0.79
Ret-202ENSMUST00000088790 Igfn1Q3KNY0 2849 aa10.12□□□□□ -0.79
Ret-202ENSMUST00000088790 Q8BGJ3 129 aa10.11□□□□□ -0.79
Ret-202ENSMUST00000088790 4930507D05RikQ8C9C9 103 aa10.11□□□□□ -0.79
Ret-202ENSMUST00000088790 Cypt15B1AXS0 87 aa10.09□□□□□ -0.79
Ret-202ENSMUST00000088790 Zzef1Q5SSH7 2924 aa10.09□□□□□ -0.79
Ret-202ENSMUST00000088790 Phxr4P15974 95 aa10.07□□□□□ -0.8
Ret-202ENSMUST00000088790 Gm17606F6ZL36 78 aa10.06□□□□□ -0.8
Ret-202ENSMUST00000088790 Chtf8P0CG14 533 aa10.03□□□□□ -0.8
Ret-202ENSMUST00000088790 Chd9Q8BYH8 2885 aa10.03□□□□□ -0.8
Ret-202ENSMUST00000088790 Defb1P56386 69 aa10.03□□□□□ -0.8
Ret-202ENSMUST00000088790 Celsr2Q9R0M0 2920 aa10.03□□□□□ -0.8
Ret-202ENSMUST00000088790 Itpr2Q9Z329 2701 aa10.01□□□□□ -0.81
Ret-202ENSMUST00000088790 Gm10065F6TJM2 114 aa9.99□□□□□ -0.81
Ret-202ENSMUST00000088790 Dchs1E9PVD3 3291 aa9.97□□□□□ -0.81
Ret-202ENSMUST00000088790 Gm36176A0A1W2P8D5 158 aa9.96□□□□□ -0.81
Ret-202ENSMUST00000088790 Cystm1Q8K353 104 aa9.96□□□□□ -0.81
Ret-202ENSMUST00000088790 Sprr1aQ62266 144 aa9.95□□□□□ -0.82
Ret-202ENSMUST00000088790 Trank1Q8BV79 2999 aa9.94□□□□□ -0.82
Ret-202ENSMUST00000088790 NbdyA0A0N4SUI7 68 aa9.93□□□□□ -0.82
Ret-202ENSMUST00000088790 Cypt14J3QPF7 87 aa9.93□□□□□ -0.82
Ret-202ENSMUST00000088790 OxtP35454 125 aa9.93□□□□□ -0.82
Ret-202ENSMUST00000088790 A730071L15RikQ8C4X0 137 aa9.9□□□□□ -0.82
Ret-202ENSMUST00000088790 Nf1Q04690 2841 aa9.9□□□□□ -0.83
Ret-202ENSMUST00000088790 Uqcr11Q9CPX8 56 aa9.89□□□□□ -0.83
Ret-202ENSMUST00000088790 Gm10139O88245 57 aa9.85□□□□□ -0.83
Ret-202ENSMUST00000088790 Gm17349F7BGH6 99 aa9.84□□□□□ -0.83
Ret-202ENSMUST00000088790 Gm26620Q9CY65 116 aa9.83□□□□□ -0.84
Ret-202ENSMUST00000088790 RelnQ60841 3461 aa9.82□□□□□ -0.84
Ret-202ENSMUST00000088790 Gm12216A0A1W2P827 62 aa9.82□□□□□ -0.84
Ret-202ENSMUST00000088790 6030445D17RikE9Q8F9 148 aa9.82□□□□□ -0.84
Ret-202ENSMUST00000088790 Gm9508A0A1W2P7W0 230 aa9.79□□□□□ -0.84
Ret-202ENSMUST00000088790 Wdfy3Q6VNB8 3508 aa9.78□□□□□ -0.84
Ret-202ENSMUST00000088790 Odf3bQ5M8M2 238 aa9.78□□□□□ -0.84
Ret-202ENSMUST00000088790 2310034C09RikQ9D746 214 aa9.77□□□□□ -0.85
Ret-202ENSMUST00000088790 Gm10643Q3URG9 111 aa9.73□□□□□ -0.85
Ret-202ENSMUST00000088790 LrbaQ9ESE1 2856 aa9.72□□□□□ -0.85
Ret-202ENSMUST00000088790 FcgbpE9Q0B5 2583 aa9.71□□□□□ -0.85
Ret-202ENSMUST00000088790 Tenm3Q9WTS6 2715 aa9.71□□□□□ -0.86
Ret-202ENSMUST00000088790 Myo15aQ9QZZ4 3511 aa9.71□□□□□ -0.86
Ret-202ENSMUST00000088790 SpegQ62407 3262 aa9.7□□□□□ -0.86
Ret-202ENSMUST00000088790 Pdzd2E9Q1M1 2796 aa9.69□□□□□ -0.86
Ret-202ENSMUST00000088790 TgO08710 2766 aa9.67□□□□□ -0.86
Ret-202ENSMUST00000088790 ApcQ61315 2845 aa9.65□□□□□ -0.86
Ret-202ENSMUST00000088790 Gm21798J3QNU5 87 aa9.65□□□□□ -0.87
Ret-202ENSMUST00000088790 Tenm4Q3UHK6 2771 aa9.64□□□□□ -0.87
Ret-202ENSMUST00000088790 Gm16253D3Z167 63 aa9.63□□□□□ -0.87
Ret-202ENSMUST00000088790 Srrm2Q8BTI8 2703 aaKnown RBP9.61□□□□□ -0.87
Ret-202ENSMUST00000088790 Rnase13Q5GAM7 153 aa9.6□□□□□ -0.87
Ret-202ENSMUST00000088790 Helz2E9QAM5 2947 aaKnown RBP9.57□□□□□ -0.88
Ret-202ENSMUST00000088790 Gm37013Q8K491 104 aa9.56□□□□□ -0.88
Ret-202ENSMUST00000088790 Krtap29-1A2A5X4 342 aa9.54□□□□□ -0.88
Ret-202ENSMUST00000088790 DmdP11531 3678 aa9.54□□□□□ -0.88
Ret-202ENSMUST00000088790 2310061N02RikQ9D6S9 174 aa9.52□□□□□ -0.88
Ret-202ENSMUST00000088790 Akap9Q70FJ1 3797 aa9.49□□□□□ -0.89
Ret-202ENSMUST00000088790 Gm4491E0CX42 125 aa9.48□□□□□ -0.89
Ret-202ENSMUST00000088790 Gm9507D3Z5T3 223 aa9.45□□□□□ -0.9
Ret-202ENSMUST00000088790 Krtap13O88375 197 aa9.42□□□□□ -0.9
Ret-202ENSMUST00000088790 SmcpP15265 143 aa9.42□□□□□ -0.9
Ret-202ENSMUST00000088790 Mp68P56379 58 aa9.41□□□□□ -0.9
Ret-202ENSMUST00000088790 Gm9821Q8K076 103 aa9.39□□□□□ -0.91
Ret-202ENSMUST00000088790 2310050C09RikG5E8Z3 280 aa9.39□□□□□ -0.91
Ret-202ENSMUST00000088790 Muc5acE9QAQ8 3455 aa9.39□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms