RNA–Protein interactions for RNA: ENSMUST00000088790.8

Ret-202, Transcript of Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ret, Length 4,497 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ret-202ENSMUST00000088790 Rhox8Q6VSS7 320 aa28.58■■■□□ 2.17
Ret-202ENSMUST00000088790 NischQ80TM9 1593 aa26.16■■□□□ 1.78
Ret-202ENSMUST00000088790 Rpgrip1Q9EPQ2 1331 aa25.78■■□□□ 1.72
Ret-202ENSMUST00000088790 Ccdc136Q3TVA9 1136 aa25.66■■□□□ 1.7
Ret-202ENSMUST00000088790 Ehmt2Q9Z148 1263 aaKnown RBP25.54■■□□□ 1.68
Ret-202ENSMUST00000088790 Cngb1E1AZ71 1325 aa25.11■■□□□ 1.61
Ret-202ENSMUST00000088790 Trim41Q5NCC3 630 aa25.1■■□□□ 1.61
Ret-202ENSMUST00000088790 Esf1Q3V1V3 845 aaKnown RBP25.1■■□□□ 1.61
Ret-202ENSMUST00000088790 Gab3Q8BSM5 595 aa24.87■■□□□ 1.57
Ret-202ENSMUST00000088790 Abcc9P70170 1546 aa24.58■■□□□ 1.53
Ret-202ENSMUST00000088790 Las1lA2BE28 776 aaKnown RBP24.45■■□□□ 1.5
Ret-202ENSMUST00000088790 Npm2Q80W85 207 aa24.44■■□□□ 1.5
Ret-202ENSMUST00000088790 Zeb1Q64318 1117 aa24.41■■□□□ 1.5
Ret-202ENSMUST00000088790 Wdr66E9Q743 1299 aa24.41■■□□□ 1.5
Ret-202ENSMUST00000088790 HrcG5E8J6 738 aa24.35■■□□□ 1.49
Ret-202ENSMUST00000088790 Acin1Q9JIX8 1338 aaKnown RBP24.35■■□□□ 1.49
Ret-202ENSMUST00000088790 Myt1lP97500 1187 aa24.34■■□□□ 1.49
Ret-202ENSMUST00000088790 Ccdc180J3QNE4 1664 aa24.34■■□□□ 1.49
Ret-202ENSMUST00000088790 Ube2uB1AUC4 352 aa24.11■■□□□ 1.45
Ret-202ENSMUST00000088790 Abcc8B2RUS7 1588 aa24.08■■□□□ 1.44
Ret-202ENSMUST00000088790 Rtl1Q7M732 1744 aa24.07■■□□□ 1.44
Ret-202ENSMUST00000088790 Zcchc6Q5BLK4 1491 aaKnown RBP23.97■■□□□ 1.43
Ret-202ENSMUST00000088790 NefmP08553 848 aa23.96■■□□□ 1.43
Ret-202ENSMUST00000088790 UbtfP25976 765 aaKnown RBP23.94■■□□□ 1.42
Ret-202ENSMUST00000088790 Gm35339A0A140LHH9 1649 aa23.68■■□□□ 1.38
Ret-202ENSMUST00000088790 Il27Q8K3I6 234 aa23.66■■□□□ 1.38
Ret-202ENSMUST00000088790 Pcgf6Q99NA9 353 aa23.45■■□□□ 1.35
Ret-202ENSMUST00000088790 Pelp1Q9DBD5 1123 aaKnown RBP23.26■■□□□ 1.31
Ret-202ENSMUST00000088790 Ap3b1Q9Z1T1 1105 aa23.23■■□□□ 1.31
Ret-202ENSMUST00000088790 Stra8P70278 393 aa23.16■■□□□ 1.3
Ret-202ENSMUST00000088790 Fam50aQ9WV03 339 aaKnown RBP23.15■■□□□ 1.3
Ret-202ENSMUST00000088790 Cdk11bP24788 784 aaKnown RBP23.13■■□□□ 1.29
Ret-202ENSMUST00000088790 CenpbP27790 599 aa23.12■■□□□ 1.29
Ret-202ENSMUST00000088790 Mier1Q5UAK0 511 aa23.1■■□□□ 1.29
Ret-202ENSMUST00000088790 Supt5hO55201 1082 aaKnown RBP23.09■■□□□ 1.29
Ret-202ENSMUST00000088790 Slc24a1Q91WD8 1130 aa23.05■■□□□ 1.28
Ret-202ENSMUST00000088790 Brd4Q9ESU6 1400 aaKnown RBP22.96■■□□□ 1.27
Ret-202ENSMUST00000088790 Nop58Q6DFW4 536 aaKnown RBP22.96■■□□□ 1.27
Ret-202ENSMUST00000088790 Ppargc1bQ8VHJ7 1014 aa22.96■■□□□ 1.27
Ret-202ENSMUST00000088790 Rb1cc1Q9ESK9 1588 aa22.95■■□□□ 1.26
Ret-202ENSMUST00000088790 Dcaf1Q80TR8 1506 aa22.93■■□□□ 1.26
Ret-202ENSMUST00000088790 NclP09405 707 aaKnown RBP22.93■■□□□ 1.26
Ret-202ENSMUST00000088790 TonslQ6NZL6 1363 aa22.92■■□□□ 1.26
Ret-202ENSMUST00000088790 Chic1Q8CBW7 227 aa22.91■■□□□ 1.26
Ret-202ENSMUST00000088790 Cep164Q5DU05 1446 aa22.87■■□□□ 1.25
Ret-202ENSMUST00000088790 Plekhg3Q4VAC9 1341 aa22.83■■□□□ 1.25
Ret-202ENSMUST00000088790 Npm1Q61937 292 aaKnown RBP22.82■■□□□ 1.24
Ret-202ENSMUST00000088790 Neurod1Q60867 357 aa22.81■■□□□ 1.24
Ret-202ENSMUST00000088790 Lmod2Q3UHZ5 550 aa22.7■■□□□ 1.22
Ret-202ENSMUST00000088790 NrdcQ8BHG1 1161 aa22.65■■□□□ 1.22
Ret-202ENSMUST00000088790 Tnnt3Q9QZ47 272 aa22.65■■□□□ 1.22
Ret-202ENSMUST00000088790 NacadQ5SWP3 1504 aa22.63■■□□□ 1.21
Ret-202ENSMUST00000088790 Anp32bQ9EST5 272 aaKnown RBP22.55■■□□□ 1.2
Ret-202ENSMUST00000088790 Clip1Q922J3 1391 aa22.55■■□□□ 1.2
Ret-202ENSMUST00000088790 ClspnQ80YR7 1315 aa22.54■■□□□ 1.2
Ret-202ENSMUST00000088790 Baz1aO88379 1555 aa22.5■■□□□ 1.19
Ret-202ENSMUST00000088790 Eid3Q3V124 375 aa22.43■■□□□ 1.18
Ret-202ENSMUST00000088790 Eif5bQ05D44 1216 aaKnown RBP22.41■■□□□ 1.18
Ret-202ENSMUST00000088790 Sall2Q9QX96 1004 aa22.38■■□□□ 1.17
Ret-202ENSMUST00000088790 Os9Q8K2C7 672 aa22.35■■□□□ 1.17
Ret-202ENSMUST00000088790 Golga3P55937 1487 aa22.27■■□□□ 1.16
Ret-202ENSMUST00000088790 Zbtb7cQ8VCZ7 619 aa22.25■■□□□ 1.15
Ret-202ENSMUST00000088790 Ubl4bQ9CQ84 188 aa22.25■■□□□ 1.15
Ret-202ENSMUST00000088790 NeflP08551 543 aa22.22■■□□□ 1.15
Ret-202ENSMUST00000088790 Kdm5dQ62240 1548 aa22.22■■□□□ 1.15
Ret-202ENSMUST00000088790 Mapk8ip2Q9ERE9 830 aa22.19■■□□□ 1.14
Ret-202ENSMUST00000088790 Hnrnpul2Q00PI9 745 aaKnown RBP22.14■■□□□ 1.13
Ret-202ENSMUST00000088790 Ccer2J3QPU5 274 aa22.13■■□□□ 1.13
Ret-202ENSMUST00000088790 Myt1Q8CFC2 1127 aa22.12■■□□□ 1.13
Ret-202ENSMUST00000088790 Rsf1E9PWW9 1441 aaKnown RBP22.08■■□□□ 1.13
Ret-202ENSMUST00000088790 Amer1Q7TS75 1132 aa22.06■■□□□ 1.12
Ret-202ENSMUST00000088790 BlmO88700 1416 aa22.05■■□□□ 1.12
Ret-202ENSMUST00000088790 Setd5Q5XJV7 1441 aa22.02■■□□□ 1.12
Ret-202ENSMUST00000088790 Anks4bQ8K3X6 423 aa22.02■■□□□ 1.12
Ret-202ENSMUST00000088790 Fkbp15Q6P9Q6 1216 aaKnown RBP22■■□□□ 1.11
Ret-202ENSMUST00000088790 Ifnlr1Q8CGK5 535 aa21.96■■□□□ 1.11
Ret-202ENSMUST00000088790 Zbtb4Q5F293 982 aa21.95■■□□□ 1.1
Ret-202ENSMUST00000088790 Kif15Q6P9L6 1387 aa21.94■■□□□ 1.1
Ret-202ENSMUST00000088790 Chic2Q9D9G3 165 aa21.94■■□□□ 1.1
Ret-202ENSMUST00000088790 Ttbk1Q6PCN3 1308 aa21.91■■□□□ 1.1
Ret-202ENSMUST00000088790 Erich6D3Z6S9 713 aa21.84■■□□□ 1.09
Ret-202ENSMUST00000088790 Csrnp3P59055 597 aa21.83■■□□□ 1.09
Ret-202ENSMUST00000088790 Anp32aO35381 247 aa21.82■■□□□ 1.08
Ret-202ENSMUST00000088790 Aebp2Q9Z248 504 aaKnown RBP21.8■■□□□ 1.08
Ret-202ENSMUST00000088790 Eea1Q8BL66 1411 aa21.8■■□□□ 1.08
Ret-202ENSMUST00000088790 4933416C03RikQ3V063 378 aa21.79■■□□□ 1.08
Ret-202ENSMUST00000088790 Ccdc88bQ4QRL3 1481 aa21.78■■□□□ 1.08
Ret-202ENSMUST00000088790 Rtl5Q5DTT4 599 aa21.77■■□□□ 1.08
Ret-202ENSMUST00000088790 Gm38655A0A286YDK6 273 aa21.76■■□□□ 1.07
Ret-202ENSMUST00000088790 Hdac5Q9Z2V6 1113 aa21.72■■□□□ 1.07
Ret-202ENSMUST00000088790 Ccdc18Q640L5 1455 aa21.69■■□□□ 1.06
Ret-202ENSMUST00000088790 Aplp2Q06335 707 aa21.66■■□□□ 1.06
Ret-202ENSMUST00000088790 Ercc6F8VPZ5 1481 aa21.65■■□□□ 1.06
Ret-202ENSMUST00000088790 Gm13697A2AK42 830 aa21.65■■□□□ 1.06
Ret-202ENSMUST00000088790 Crybg2B7ZCC2 1516 aa21.64■■□□□ 1.05
Ret-202ENSMUST00000088790 Sycp2Q9CUU3 1500 aa21.64■■□□□ 1.05
Ret-202ENSMUST00000088790 Nlrp6Q91WS2 869 aa21.63■■□□□ 1.05
Ret-202ENSMUST00000088790 Mrs2Q5NCE8 434 aa21.63■■□□□ 1.05
Ret-202ENSMUST00000088790 Prdm10Q3UTQ7 1184 aa21.63■■□□□ 1.05
Ret-202ENSMUST00000088790 Atp1b4Q99ME6 356 aa21.59■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 450.4 ms