RNA–Protein interactions for RNA: ENSMUST00000223065.1

Trim27-207, Transcript of Zinc finger protein RFP, mousemouse

TSL 1 (best) BASIC

Gene Trim27, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-207ENSMUST00000223065 Muc6Q80T03 2850 aa13.91□□□□□ -0.18
Trim27-207ENSMUST00000223065 E130218I03RikA0A0U1RNU5 63 aa13.9□□□□□ -0.18
Trim27-207ENSMUST00000223065 Ighv10-3A0A075B5T6 119 aa13.89□□□□□ -0.19
Trim27-207ENSMUST00000223065 BC048502Q80Y74 154 aa13.89□□□□□ -0.19
Trim27-207ENSMUST00000223065 Msrb1Q9JLC3 116 aa13.88□□□□□ -0.19
Trim27-207ENSMUST00000223065 Q9DAA7 145 aa13.86□□□□□ -0.19
Trim27-207ENSMUST00000223065 Defb11Q8R2I7 77 aa13.85□□□□□ -0.19
Trim27-207ENSMUST00000223065 Igkv8-26A0A075B5N5 123 aa13.84□□□□□ -0.19
Trim27-207ENSMUST00000223065 Gm3618D3Z4P5 127 aa13.84□□□□□ -0.19
Trim27-207ENSMUST00000223065 B9d2Q3UK10 175 aa13.84□□□□□ -0.19
Trim27-207ENSMUST00000223065 Gm2916Q9D9B9 127 aa13.84□□□□□ -0.19
Trim27-207ENSMUST00000223065 Elof1P60003 83 aa13.83□□□□□ -0.2
Trim27-207ENSMUST00000223065 Sprr1aQ62266 144 aa13.83□□□□□ -0.2
Trim27-207ENSMUST00000223065 Cd164Q9R0L9 197 aa13.83□□□□□ -0.2
Trim27-207ENSMUST00000223065 4930519P11RikQ9CUJ8 166 aa13.82□□□□□ -0.2
Trim27-207ENSMUST00000223065 Defa16P50714 93 aa13.81□□□□□ -0.2
Trim27-207ENSMUST00000223065 Dnah17Q69Z23 4481 aa13.8□□□□□ -0.2
Trim27-207ENSMUST00000223065 PkigO70139 76 aa13.8□□□□□ -0.2
Trim27-207ENSMUST00000223065 Gm11627A6PWP4 55 aa13.8□□□□□ -0.2
Trim27-207ENSMUST00000223065 Igkv8-27A0A0G2JF28 120 aa13.79□□□□□ -0.2
Trim27-207ENSMUST00000223065 Igkv8-30A0A140T8M3 121 aa13.79□□□□□ -0.2
Trim27-207ENSMUST00000223065 Gm7276Q3TYW4 209 aa13.78□□□□□ -0.2
Trim27-207ENSMUST00000223065 9530003J23RikQ8BM26 151 aa13.78□□□□□ -0.2
Trim27-207ENSMUST00000223065 Igkv3-12A0A140T8P0 119 aa13.76□□□□□ -0.21
Trim27-207ENSMUST00000223065 Lamtor3O88653 124 aa13.76□□□□□ -0.21
Trim27-207ENSMUST00000223065 Smim29Q8R043 75 aa13.76□□□□□ -0.21
Trim27-207ENSMUST00000223065 FasnP19096 2504 aaKnown RBP13.76□□□□□ -0.21
Trim27-207ENSMUST00000223065 2310061N02RikQ9D6S9 174 aa13.74□□□□□ -0.21
Trim27-207ENSMUST00000223065 Dnah7bL7N1Y0 4068 aa13.74□□□□□ -0.21
Trim27-207ENSMUST00000223065 Inafm2A0A1L1STD6 152 aa13.73□□□□□ -0.21
Trim27-207ENSMUST00000223065 Ormdl1Q921I0 153 aa13.73□□□□□ -0.21
Trim27-207ENSMUST00000223065 Defa1P11477 93 aa13.72□□□□□ -0.21
Trim27-207ENSMUST00000223065 Ntn5Q3UQ22 452 aa13.72□□□□□ -0.21
Trim27-207ENSMUST00000223065 Krtap10-10A0A1W2P7T6 217 aa13.71□□□□□ -0.21
Trim27-207ENSMUST00000223065 Wfdc6bF6ULY1 148 aa13.71□□□□□ -0.21
Trim27-207ENSMUST00000223065 Gm4707V9GXN5 68 aa13.71□□□□□ -0.21
Trim27-207ENSMUST00000223065 Pou2af1Q64693 256 aa13.71□□□□□ -0.22
Trim27-207ENSMUST00000223065 Gm17349F7BGH6 99 aa13.7□□□□□ -0.22
Trim27-207ENSMUST00000223065 Defb37Q7TMD2 62 aa13.7□□□□□ -0.22
Trim27-207ENSMUST00000223065 Dnah1E9Q8T7 4250 aa13.7□□□□□ -0.22
Trim27-207ENSMUST00000223065 Gm9508A0A1W2P7W0 230 aa13.69□□□□□ -0.22
Trim27-207ENSMUST00000223065 Dmac1Q9CQ00 111 aa13.69□□□□□ -0.22
Trim27-207ENSMUST00000223065 P84750 121 aa13.69□□□□□ -0.22
Trim27-207ENSMUST00000223065 Fam168bQ80XQ8 194 aa13.69□□□□□ -0.22
Trim27-207ENSMUST00000223065 Defa4P28311 92 aa13.68□□□□□ -0.22
Trim27-207ENSMUST00000223065 Ighv2-5A0A0A6YY69 116 aa13.67□□□□□ -0.22
Trim27-207ENSMUST00000223065 Prol1E9PYQ4 312 aa13.67□□□□□ -0.22
Trim27-207ENSMUST00000223065 Gm10308Q9CVR5 141 aa13.67□□□□□ -0.22
Trim27-207ENSMUST00000223065 BaalcQ8VHV1 145 aa13.66□□□□□ -0.22
Trim27-207ENSMUST00000223065 Igkv8-21A0A140T8P7 120 aa13.66□□□□□ -0.22
Trim27-207ENSMUST00000223065 Obox2E9PXV9 151 aa13.66□□□□□ -0.22
Trim27-207ENSMUST00000223065 Igf1P05017 153 aa13.66□□□□□ -0.22
Trim27-207ENSMUST00000223065 Rbm3O89086 153 aaKnown RBP13.65□□□□□ -0.22
Trim27-207ENSMUST00000223065 A730071L15RikQ8C4X0 137 aa13.65□□□□□ -0.22
Trim27-207ENSMUST00000223065 Tmem254aP0DN89 123 aa13.64□□□□□ -0.23
Trim27-207ENSMUST00000223065 Tmem254bP0DN90 123 aa13.64□□□□□ -0.23
Trim27-207ENSMUST00000223065 Tmem254cP0DN91 123 aa13.64□□□□□ -0.23
Trim27-207ENSMUST00000223065 4930535I16RikQ9CUI2 172 aa13.64□□□□□ -0.23
Trim27-207ENSMUST00000223065 Igkv1-122A0A140T8M9 119 aa13.64□□□□□ -0.23
Trim27-207ENSMUST00000223065 Pde6gP09174 87 aa13.64□□□□□ -0.23
Trim27-207ENSMUST00000223065 Apoc4Q61268 124 aa13.63□□□□□ -0.23
Trim27-207ENSMUST00000223065 Igkv3-2A0A075B5P0 119 aa13.61□□□□□ -0.23
Trim27-207ENSMUST00000223065 Stab2Q8R4U0 2559 aa13.61□□□□□ -0.23
Trim27-207ENSMUST00000223065 Ubl5Q9EPV8 73 aa13.6□□□□□ -0.23
Trim27-207ENSMUST00000223065 Hist1h4aP62806 103 aaKnown RBP13.58□□□□□ -0.24
Trim27-207ENSMUST00000223065 Fam19a1Q7TPG8 133 aa13.58□□□□□ -0.24
Trim27-207ENSMUST00000223065 Tmem243B2RVB9 118 aa13.57□□□□□ -0.24
Trim27-207ENSMUST00000223065 Vpreb2P13373 142 aa13.57□□□□□ -0.24
Trim27-207ENSMUST00000223065 Fam19a5Q91WE9 132 aa13.57□□□□□ -0.24
Trim27-207ENSMUST00000223065 Csmd3Q80T79 3707 aa13.57□□□□□ -0.24
Trim27-207ENSMUST00000223065 Defb40Q70KL2 73 aa13.57□□□□□ -0.24
Trim27-207ENSMUST00000223065 Rps28P62858 69 aaKnown RBP13.56□□□□□ -0.24
Trim27-207ENSMUST00000223065 Igkv8-28A0A0G2JE47 121 aa13.54□□□□□ -0.24
Trim27-207ENSMUST00000223065 Gm11011D3Z3L9 86 aa13.54□□□□□ -0.24
Trim27-207ENSMUST00000223065 TgO08710 2766 aa13.54□□□□□ -0.24
Trim27-207ENSMUST00000223065 A0A286YE02 88 aa13.53□□□□□ -0.24
Trim27-207ENSMUST00000223065 A930002H24RikQ8C8Y3 163 aa13.53□□□□□ -0.24
Trim27-207ENSMUST00000223065 MplkipQ9D011 178 aa13.52□□□□□ -0.25
Trim27-207ENSMUST00000223065 A830005F24RikQ8BRT5 167 aa13.51□□□□□ -0.25
Trim27-207ENSMUST00000223065 Ighv2-2A0A075B5P8 116 aa13.5□□□□□ -0.25
Trim27-207ENSMUST00000223065 P01821 116 aa13.5□□□□□ -0.25
Trim27-207ENSMUST00000223065 Gm10837Q3UTT8 145 aa13.5□□□□□ -0.25
Trim27-207ENSMUST00000223065 Cystm1Q8K353 104 aa13.5□□□□□ -0.25
Trim27-207ENSMUST00000223065 SycnQ8VCK7 134 aa13.5□□□□□ -0.25
Trim27-207ENSMUST00000223065 Sfta2E9PXB6 77 aa13.49□□□□□ -0.25
Trim27-207ENSMUST00000223065 Dync2h1Q45VK7 4306 aa13.49□□□□□ -0.25
Trim27-207ENSMUST00000223065 ScxQ64124 207 aa13.48□□□□□ -0.25
Trim27-207ENSMUST00000223065 Defa25Q5G864 92 aa13.47□□□□□ -0.25
Trim27-207ENSMUST00000223065 Fam104aA2A6P4 185 aa13.47□□□□□ -0.25
Trim27-207ENSMUST00000223065 PrkdcP97313 4128 aa13.47□□□□□ -0.25
Trim27-207ENSMUST00000223065 Huwe1Q7TMY8 4377 aaKnown RBP13.46□□□□□ -0.25
Trim27-207ENSMUST00000223065 Zcchc13Q9D548 170 aa13.46□□□□□ -0.25
Trim27-207ENSMUST00000223065 7530416G11RikJ3QJX6 159 aa13.45□□□□□ -0.26
Trim27-207ENSMUST00000223065 U90926O08546 118 aa13.45□□□□□ -0.26
Trim27-207ENSMUST00000223065 Sprr2jO70561 109 aa13.45□□□□□ -0.26
Trim27-207ENSMUST00000223065 Cox6a2P43023 97 aa13.45□□□□□ -0.26
Trim27-207ENSMUST00000223065 Defa23Q5G866 93 aa13.44□□□□□ -0.26
Trim27-207ENSMUST00000223065 Smlr1J3QMJ4 66 aa13.42□□□□□ -0.26
Trim27-207ENSMUST00000223065 P06320 134 aa13.42□□□□□ -0.26
Trim27-207ENSMUST00000223065 Vpreb1P13372 142 aa13.42□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 45.6 ms