RNA–Protein interactions for RNA: ENSMUST00000187938.6

Fn1-211, Transcript of Fibronectin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Fn1, Length 7,965 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-211ENSMUST00000187938 Ypel4Q65Z93 127 aa8.5□□□□□ -1.05
Fn1-211ENSMUST00000187938 Gm10135F6TEE5 83 aa8.49□□□□□ -1.05
Fn1-211ENSMUST00000187938 AI854703Q8BIN3 203 aa8.49□□□□□ -1.05
Fn1-211ENSMUST00000187938 Anapc11Q9CPX9 84 aa8.48□□□□□ -1.05
Fn1-211ENSMUST00000187938 Znf580Q9DB38 172 aa8.48□□□□□ -1.05
Fn1-211ENSMUST00000187938 Defb9Q8R2I6 67 aa8.48□□□□□ -1.05
Fn1-211ENSMUST00000187938 Chtf8P0CG14 533 aa8.48□□□□□ -1.05
Fn1-211ENSMUST00000187938 Cypt15B1AXS0 87 aa8.47□□□□□ -1.05
Fn1-211ENSMUST00000187938 Gm10770F7D043 238 aa8.46□□□□□ -1.05
Fn1-211ENSMUST00000187938 Col27a1Q5QNQ9 1845 aa8.46□□□□□ -1.06
Fn1-211ENSMUST00000187938 Usp9yF8VPU6 2556 aa8.46□□□□□ -1.06
Fn1-211ENSMUST00000187938 CicQ924A2 2510 aa8.45□□□□□ -1.06
Fn1-211ENSMUST00000187938 Camk2n1Q6QWF9 78 aa8.44□□□□□ -1.06
Fn1-211ENSMUST00000187938 A330070K13RikQ8CA53 115 aa8.43□□□□□ -1.06
Fn1-211ENSMUST00000187938 Gm10320E9PW43 113 aa8.39□□□□□ -1.07
Fn1-211ENSMUST00000187938 4930518I15RikQ3V2W7 57 aa8.38□□□□□ -1.07
Fn1-211ENSMUST00000187938 Krtap15-1Q9QZU5 150 aa8.38□□□□□ -1.07
Fn1-211ENSMUST00000187938 B430305J03RikQ8BQQ8 176 aa8.36□□□□□ -1.07
Fn1-211ENSMUST00000187938 Alms1Q8K4E0 3251 aa8.36□□□□□ -1.07
Fn1-211ENSMUST00000187938 MtorQ9JLN9 2549 aa8.36□□□□□ -1.07
Fn1-211ENSMUST00000187938 Gm9573F7C950 1606 aa8.35□□□□□ -1.07
Fn1-211ENSMUST00000187938 Usp9xP70398 2559 aaKnown RBP8.34□□□□□ -1.07
Fn1-211ENSMUST00000187938 Sec61bQ9CQS8 96 aaKnown RBP8.34□□□□□ -1.07
Fn1-211ENSMUST00000187938 Krtap11-1E9Q2E9 183 aa8.34□□□□□ -1.07
Fn1-211ENSMUST00000187938 Uqcr11Q9CPX8 56 aa8.31□□□□□ -1.08
Fn1-211ENSMUST00000187938 3110070M22RikQ9DAQ7 118 aa8.31□□□□□ -1.08
Fn1-211ENSMUST00000187938 Rps28P62858 69 aaKnown RBP8.3□□□□□ -1.08
Fn1-211ENSMUST00000187938 Sprr4Q8CGN8 76 aa8.29□□□□□ -1.08
Fn1-211ENSMUST00000187938 Fam104aA2A6P4 185 aa8.29□□□□□ -1.08
Fn1-211ENSMUST00000187938 Gm11213A0A1B0GR83 88 aa8.29□□□□□ -1.08
Fn1-211ENSMUST00000187938 Gm3233E9Q2H5 230 aa8.28□□□□□ -1.08
Fn1-211ENSMUST00000187938 Psors1c2Q80ZC9 134 aa8.27□□□□□ -1.08
Fn1-211ENSMUST00000187938 Epg5Q80TA9 2572 aa8.27□□□□□ -1.09
Fn1-211ENSMUST00000187938 Setd2E9Q5F9 2537 aa8.27□□□□□ -1.09
Fn1-211ENSMUST00000187938 Gm9955Q8CEJ8 102 aa8.26□□□□□ -1.09
Fn1-211ENSMUST00000187938 Gm10772F7AIG4 85 aa8.25□□□□□ -1.09
Fn1-211ENSMUST00000187938 Coa5Q99M07 74 aa8.23□□□□□ -1.09
Fn1-211ENSMUST00000187938 Gm21798J3QNU5 87 aa8.23□□□□□ -1.09
Fn1-211ENSMUST00000187938 2310034C09RikQ9D746 214 aa8.23□□□□□ -1.09
Fn1-211ENSMUST00000187938 A530084C06RikQ3UTW2 186 aa8.22□□□□□ -1.09
Fn1-211ENSMUST00000187938 Ankrd17Q99NH0 2603 aaKnown RBP8.2□□□□□ -1.1
Fn1-211ENSMUST00000187938 Gm4491E0CX42 125 aa8.19□□□□□ -1.1
Fn1-211ENSMUST00000187938 Crip3Q6Q6R3 243 aa8.19□□□□□ -1.1
Fn1-211ENSMUST00000187938 Usp24B1AY13 2617 aaKnown RBP8.17□□□□□ -1.1
Fn1-211ENSMUST00000187938 Gm3880A0A1B0GSB3 72 aa8.16□□□□□ -1.1
Fn1-211ENSMUST00000187938 Sprr1bQ62267 153 aa8.16□□□□□ -1.1
Fn1-211ENSMUST00000187938 CnbpP53996 178 aaKnown RBP8.15□□□□□ -1.1
Fn1-211ENSMUST00000187938 Gm7138L7N2C3 230 aa8.14□□□□□ -1.11
Fn1-211ENSMUST00000187938 Gm3238W4VSP7 230 aa8.14□□□□□ -1.11
Fn1-211ENSMUST00000187938 Gm19426M0QWC7 77 aa8.14□□□□□ -1.11
Fn1-211ENSMUST00000187938 Dmbt1Q60997 2085 aa8.14□□□□□ -1.11
Fn1-211ENSMUST00000187938 NbdyA0A0N4SUI7 68 aa8.12□□□□□ -1.11
Fn1-211ENSMUST00000187938 Ankrd11E9Q4F7 2643 aa8.11□□□□□ -1.11
Fn1-211ENSMUST00000187938 Gm7137J3QMW1 236 aa8.11□□□□□ -1.11
Fn1-211ENSMUST00000187938 Lypd5Q9D7Z7 256 aa8.11□□□□□ -1.11
Fn1-211ENSMUST00000187938 FasnP19096 2504 aaKnown RBP8.11□□□□□ -1.11
Fn1-211ENSMUST00000187938 Gm7276Q3TYW4 209 aa8.09□□□□□ -1.11
Fn1-211ENSMUST00000187938 Cypt14J3QPF7 87 aa8.08□□□□□ -1.12
Fn1-211ENSMUST00000187938 Cep192E9Q4Y4 2514 aaKnown RBP8.07□□□□□ -1.12
Fn1-211ENSMUST00000187938 Zcchc13Q9D548 170 aa8.07□□□□□ -1.12
Fn1-211ENSMUST00000187938 AY074887Q8R5F9 132 aa8.07□□□□□ -1.12
Fn1-211ENSMUST00000187938 Krtap16-1A2A5X5 502 aa8.06□□□□□ -1.12
Fn1-211ENSMUST00000187938 Gm10308Q9CVR5 141 aa8.06□□□□□ -1.12
Fn1-211ENSMUST00000187938 Piezo2Q8CD54 2822 aa8.06□□□□□ -1.12
Fn1-211ENSMUST00000187938 Phxr4P15974 95 aa8.01□□□□□ -1.13
Fn1-211ENSMUST00000187938 Bahcc1Q3UHR0 2643 aa7.99□□□□□ -1.13
Fn1-211ENSMUST00000187938 Gm10065F6TJM2 114 aa7.99□□□□□ -1.13
Fn1-211ENSMUST00000187938 Unc79Q0KK59 2596 aa7.99□□□□□ -1.13
Fn1-211ENSMUST00000187938 C530025M09RikF6RGA8 229 aa7.98□□□□□ -1.13
Fn1-211ENSMUST00000187938 Krtap26-1Q9D7N2 215 aa7.97□□□□□ -1.13
Fn1-211ENSMUST00000187938 Gm17349F7BGH6 99 aa7.96□□□□□ -1.13
Fn1-211ENSMUST00000187938 Nsd1O88491 2588 aaKnown RBP7.96□□□□□ -1.14
Fn1-211ENSMUST00000187938 6030445D17RikE9Q8F9 148 aa7.96□□□□□ -1.14
Fn1-211ENSMUST00000187938 Gm5767A0A0J9YTU8 78 aa7.96□□□□□ -1.14
Fn1-211ENSMUST00000187938 Smr3aQ61900 147 aa7.95□□□□□ -1.14
Fn1-211ENSMUST00000187938 SetxA2AKX3 2646 aa7.91□□□□□ -1.14
Fn1-211ENSMUST00000187938 Nbeal1E9PYP2 2688 aa7.88□□□□□ -1.15
Fn1-211ENSMUST00000187938 HrnrQ8VHD8 2496 aa7.87□□□□□ -1.15
Fn1-211ENSMUST00000187938 AtrQ9JKK8 2635 aa7.87□□□□□ -1.15
Fn1-211ENSMUST00000187938 BC029722A0A0N4SW31 51 aa7.86□□□□□ -1.15
Fn1-211ENSMUST00000187938 FlnbQ80X90 2602 aaKnown RBP7.85□□□□□ -1.15
Fn1-211ENSMUST00000187938 Gm10643Q3URG9 111 aa7.85□□□□□ -1.15
Fn1-211ENSMUST00000187938 Abca12E9Q876 2595 aa7.84□□□□□ -1.15
Fn1-211ENSMUST00000187938 Fn1P11276 2477 aaKnown RBP7.83□□□□□ -1.16
Fn1-211ENSMUST00000187938 Gm9508A0A1W2P7W0 230 aa7.83□□□□□ -1.16
Fn1-211ENSMUST00000187938 Odf3bQ5M8M2 238 aa7.78□□□□□ -1.16
Fn1-211ENSMUST00000187938 Smim29Q8R043 75 aa7.73□□□□□ -1.17
Fn1-211ENSMUST00000187938 Gm36176A0A1W2P8D5 158 aa7.73□□□□□ -1.17
Fn1-211ENSMUST00000187938 Gm10382Q3V0T5 144 aa7.69□□□□□ -1.18
Fn1-211ENSMUST00000187938 Myo18bE9PV66 2605 aa7.69□□□□□ -1.18
Fn1-211ENSMUST00000187938 Eif4ebp3Q80VV3 101 aa7.68□□□□□ -1.18
Fn1-211ENSMUST00000187938 Stab1Q8R4Y4 2571 aa7.67□□□□□ -1.18
Fn1-211ENSMUST00000187938 Rpl37Q9D823 97 aa7.65□□□□□ -1.19
Fn1-211ENSMUST00000187938 Tnp2P11378 117 aa7.63□□□□□ -1.19
Fn1-211ENSMUST00000187938 Hectd1Q69ZR2 2618 aaKnown RBP7.6□□□□□ -1.19
Fn1-211ENSMUST00000187938 Krtap13O88375 197 aa7.6□□□□□ -1.19
Fn1-211ENSMUST00000187938 Romo1P60603 79 aa7.6□□□□□ -1.19
Fn1-211ENSMUST00000187938 Kmt2bO08550 2713 aa7.59□□□□□ -1.2
Fn1-211ENSMUST00000187938 Notch1Q01705 2531 aa7.58□□□□□ -1.2
Fn1-211ENSMUST00000187938 Akap13E9Q394 2776 aa7.57□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 91.1 ms