RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Rpl36-ps4A0A140T8U4 117 aa5.62□□□□□ -1.51
Trim39-205ENSMUST00000173369 PscaP57096 123 aa5.62□□□□□ -1.51
Trim39-205ENSMUST00000173369 BC048502Q80Y74 154 aa5.62□□□□□ -1.51
Trim39-205ENSMUST00000173369 P01819 144 aa5.61□□□□□ -1.51
Trim39-205ENSMUST00000173369 Gm7102J3QQ10 178 aa5.61□□□□□ -1.51
Trim39-205ENSMUST00000173369 Plac8l1Q08EJ0 177 aa5.61□□□□□ -1.51
Trim39-205ENSMUST00000173369 Ube2d4D3YUH6 135 aa5.61□□□□□ -1.51
Trim39-205ENSMUST00000173369 Gm5153P01627 120 aa5.61□□□□□ -1.51
Trim39-205ENSMUST00000173369 Fam19a4Q7TPG5 135 aa5.61□□□□□ -1.51
Trim39-205ENSMUST00000173369 FcorP0DJI6 106 aa5.6□□□□□ -1.51
Trim39-205ENSMUST00000173369 Gm42674D3YUT9 64 aa5.6□□□□□ -1.51
Trim39-205ENSMUST00000173369 CnbpP53996 178 aaKnown RBP5.6□□□□□ -1.51
Trim39-205ENSMUST00000173369 Gm16485Q8C4B7 115 aa5.6□□□□□ -1.51
Trim39-205ENSMUST00000173369 Gm10542F6XDR3 90 aa5.59□□□□□ -1.51
Trim39-205ENSMUST00000173369 Rbm3O89086 153 aaKnown RBP5.59□□□□□ -1.51
Trim39-205ENSMUST00000173369 E130208F15RikQ3UPV3 143 aa5.59□□□□□ -1.51
Trim39-205ENSMUST00000173369 4930519P11RikQ9CUJ8 166 aa5.59□□□□□ -1.51
Trim39-205ENSMUST00000173369 Ryr2E9Q401 4966 aaKnown RBP5.59□□□□□ -1.51
Trim39-205ENSMUST00000173369 Igkv4-79A0A075B5L8 119 aa5.59□□□□□ -1.51
Trim39-205ENSMUST00000173369 Igkv3-9A0A140T8P4 119 aa5.59□□□□□ -1.51
Trim39-205ENSMUST00000173369 Gm10643Q3URG9 111 aa5.59□□□□□ -1.51
Trim39-205ENSMUST00000173369 Trav11A0A0B4J1J9 114 aa5.58□□□□□ -1.52
Trim39-205ENSMUST00000173369 AW011738F6S7Q2 159 aa5.58□□□□□ -1.52
Trim39-205ENSMUST00000173369 Gm17472A0A075B683 117 aa5.58□□□□□ -1.52
Trim39-205ENSMUST00000173369 Igkv2-137A0A0B4J1H6 120 aa5.58□□□□□ -1.52
Trim39-205ENSMUST00000173369 Trav14-1A0A0G2JF94 121 aa5.58□□□□□ -1.52
Trim39-205ENSMUST00000173369 Defa27F2Z403 93 aa5.58□□□□□ -1.52
Trim39-205ENSMUST00000173369 SrarpQ3ULG3 163 aa5.58□□□□□ -1.52
Trim39-205ENSMUST00000173369 B230307C23RikQ8BLB2 64 aa5.58□□□□□ -1.52
Trim39-205ENSMUST00000173369 EnhoQ8K1D8 76 aa5.58□□□□□ -1.52
Trim39-205ENSMUST00000173369 Gm26620Q9CY65 116 aa5.58□□□□□ -1.52
Trim39-205ENSMUST00000173369 Ighv1-11A0A0A6YWI9 117 aa5.57□□□□□ -1.52
Trim39-205ENSMUST00000173369 Krtap11-1E9Q2E9 183 aa5.57□□□□□ -1.52
Trim39-205ENSMUST00000173369 Ifitm10Q8BR26 201 aa5.57□□□□□ -1.52
Trim39-205ENSMUST00000173369 Cystm1Q8K353 104 aa5.57□□□□□ -1.52
Trim39-205ENSMUST00000173369 Igkv6-13A0A0G2JGY3 119 aa5.57□□□□□ -1.52
Trim39-205ENSMUST00000173369 4933415A04RikQ9D443 101 aa5.57□□□□□ -1.52
Trim39-205ENSMUST00000173369 HrnrQ8VHD8 2496 aa5.56□□□□□ -1.52
Trim39-205ENSMUST00000173369 Gm10837Q3UTT8 145 aa5.56□□□□□ -1.52
Trim39-205ENSMUST00000173369 Odf3l2Q3TZ65 277 aa5.55□□□□□ -1.52
Trim39-205ENSMUST00000173369 UqcrqQ9CQ69 82 aa5.55□□□□□ -1.52
Trim39-205ENSMUST00000173369 Fam104aA2A6P4 185 aa5.55□□□□□ -1.52
Trim39-205ENSMUST00000173369 Cdc42se2Q8BGH7 84 aa5.55□□□□□ -1.52
Trim39-205ENSMUST00000173369 4930442H23RikQ9D5G7 103 aa5.55□□□□□ -1.52
Trim39-205ENSMUST00000173369 Ighv2-6-8A0A0A6YWY9 116 aa5.54□□□□□ -1.52
Trim39-205ENSMUST00000173369 Gm43218A0A0G2JGT0 114 aa5.54□□□□□ -1.52
Trim39-205ENSMUST00000173369 Ighv10-1A0A0B4J1J6 119 aa5.54□□□□□ -1.52
Trim39-205ENSMUST00000173369 Wfdc3Q14AE4 130 aa5.54□□□□□ -1.52
Trim39-205ENSMUST00000173369 C920008G01RikA0A0B4J1N1 112 aa5.54□□□□□ -1.52
Trim39-205ENSMUST00000173369 Higd1aQ9JLR9 95 aa5.54□□□□□ -1.52
Trim39-205ENSMUST00000173369 SelenowP63300 88 aa5.53□□□□□ -1.52
Trim39-205ENSMUST00000173369 Igkv3-10A0A0G2JGN0 119 aa5.52□□□□□ -1.53
Trim39-205ENSMUST00000173369 Tmem254aP0DN89 123 aa5.52□□□□□ -1.53
Trim39-205ENSMUST00000173369 Tmem254bP0DN90 123 aa5.52□□□□□ -1.53
Trim39-205ENSMUST00000173369 Tmem254cP0DN91 123 aa5.52□□□□□ -1.53
Trim39-205ENSMUST00000173369 Trav9n-4A0A075B631 113 aa5.51□□□□□ -1.53
Trim39-205ENSMUST00000173369 Rpl28P41105 137 aaKnown RBP5.51□□□□□ -1.53
Trim39-205ENSMUST00000173369 Foxi2Q3I5G5 311 aa5.51□□□□□ -1.53
Trim39-205ENSMUST00000173369 Gm9747Q810H1 104 aa5.51□□□□□ -1.53
Trim39-205ENSMUST00000173369 MobpQ9D2P8 170 aa5.51□□□□□ -1.53
Trim39-205ENSMUST00000173369 Gm35549A0A0N4SUS7 141 aa5.51□□□□□ -1.53
Trim39-205ENSMUST00000173369 Tfpi2O35536 230 aa5.51□□□□□ -1.53
Trim39-205ENSMUST00000173369 Prelid3aQ8VE85 172 aa5.51□□□□□ -1.53
Trim39-205ENSMUST00000173369 Spink8Q09TK9 105 aa5.51□□□□□ -1.53
Trim39-205ENSMUST00000173369 Ighv1-62-1A0A075B5U3 116 aa5.5□□□□□ -1.53
Trim39-205ENSMUST00000173369 A0A286YCN5 57 aa5.5□□□□□ -1.53
Trim39-205ENSMUST00000173369 BikO70337 150 aa5.5□□□□□ -1.53
Trim39-205ENSMUST00000173369 Timm17aQ9Z0V8 171 aa5.5□□□□□ -1.53
Trim39-205ENSMUST00000173369 Fat1A0A1L1SQU7 4645 aa5.49□□□□□ -1.53
Trim39-205ENSMUST00000173369 Krtap13O88375 197 aa5.49□□□□□ -1.53
Trim39-205ENSMUST00000173369 Smim26Q3V460 107 aa5.49□□□□□ -1.53
Trim39-205ENSMUST00000173369 SpinklQ8CEK3 90 aa5.49□□□□□ -1.53
Trim39-205ENSMUST00000173369 BC025920Q3US60 128 aa5.49□□□□□ -1.53
Trim39-205ENSMUST00000173369 Ighv2-9A0A075B5Q5 116 aa5.48□□□□□ -1.53
Trim39-205ENSMUST00000173369 Ndufc1Q9CQY9 76 aa5.48□□□□□ -1.53
Trim39-205ENSMUST00000173369 Ifitm1Q9D103 106 aa5.48□□□□□ -1.53
Trim39-205ENSMUST00000173369 Phf5aP83870 110 aaKnown RBP5.47□□□□□ -1.53
Trim39-205ENSMUST00000173369 Defb40Q70KL2 73 aa5.47□□□□□ -1.53
Trim39-205ENSMUST00000173369 Dnal4Q9DCM4 105 aa5.47□□□□□ -1.53
Trim39-205ENSMUST00000173369 Ighv2-5A0A0A6YY69 116 aa5.47□□□□□ -1.53
Trim39-205ENSMUST00000173369 Gm20730A0A075B5J6 119 aa5.47□□□□□ -1.53
Trim39-205ENSMUST00000173369 Ighv2-9-1A0A075B697 116 aa5.47□□□□□ -1.53
Trim39-205ENSMUST00000173369 Igkv3-2A0A075B5P0 119 aa5.46□□□□□ -1.54
Trim39-205ENSMUST00000173369 Igkv4-92A0A0B4J1I2 117 aa5.46□□□□□ -1.54
Trim39-205ENSMUST00000173369 Gm9821Q8K076 103 aa5.46□□□□□ -1.54
Trim39-205ENSMUST00000173369 AI606181Q8C7B9 129 aa5.46□□□□□ -1.54
Trim39-205ENSMUST00000173369 4930546C10RikE9Q4Y3 121 aa5.45□□□□□ -1.54
Trim39-205ENSMUST00000173369 Glrp1E9Q9S8 174 aa5.45□□□□□ -1.54
Trim39-205ENSMUST00000173369 Lect2O88803 151 aa5.45□□□□□ -1.54
Trim39-205ENSMUST00000173369 Dnah2P0C6F1 4456 aa5.45□□□□□ -1.54
Trim39-205ENSMUST00000173369 Mpv17l2Q8VIK2 200 aa5.45□□□□□ -1.54
Trim39-205ENSMUST00000173369 Igkv8-24A0A140T8P5 121 aa5.44□□□□□ -1.54
Trim39-205ENSMUST00000173369 Ube2bP63147 152 aa5.44□□□□□ -1.54
Trim39-205ENSMUST00000173369 3110070M22RikQ9DAQ7 118 aa5.44□□□□□ -1.54
Trim39-205ENSMUST00000173369 Gm17521F6QAC8 156 aa5.44□□□□□ -1.54
Trim39-205ENSMUST00000173369 MplkipQ9D011 178 aa5.44□□□□□ -1.54
Trim39-205ENSMUST00000173369 SacsQ9JLC8 4582 aa5.44□□□□□ -1.54
Trim39-205ENSMUST00000173369 Cdc42se1Q8BHL7 80 aa5.44□□□□□ -1.54
Trim39-205ENSMUST00000173369 1600014C23RikQ9DAX4 101 aa5.44□□□□□ -1.54
Trim39-205ENSMUST00000173369 Dync1h1Q9JHU4 4644 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 22,080 RNA–protein pairs in 83.5 ms