RNA–Protein interactions for RNA: ENSMUST00000171404.7

Gtf3c4-204, Transcript of General transcription factor 3C polypeptide 4, mousemouse

TSL 1 (best) BASIC

Gene Gtf3c4, Length 7,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c4-204ENSMUST00000171404 Notch2O35516 2470 aa10.53□□□□□ -0.72
Gtf3c4-204ENSMUST00000171404 Sptbn4E9PX29 2561 aa10.52□□□□□ -0.72
Gtf3c4-204ENSMUST00000171404 Prr13Q9CQJ5 137 aa10.51□□□□□ -0.73
Gtf3c4-204ENSMUST00000171404 Gm10308Q9CVR5 141 aa10.51□□□□□ -0.73
Gtf3c4-204ENSMUST00000171404 Defb9Q8R2I6 67 aa10.51□□□□□ -0.73
Gtf3c4-204ENSMUST00000171404 Plac8Q9JI48 112 aa10.49□□□□□ -0.73
Gtf3c4-204ENSMUST00000171404 Eif4ebp3Q80VV3 101 aa10.46□□□□□ -0.74
Gtf3c4-204ENSMUST00000171404 Gm20538F6Z9R1 75 aa10.44□□□□□ -0.74
Gtf3c4-204ENSMUST00000171404 Ankhd1E9PUR0 2548 aaKnown RBP10.43□□□□□ -0.74
Gtf3c4-204ENSMUST00000171404 Sprr4Q8CGN8 76 aa10.43□□□□□ -0.74
Gtf3c4-204ENSMUST00000171404 Golgb1E9PVZ8 3238 aa10.42□□□□□ -0.74
Gtf3c4-204ENSMUST00000171404 Piezo2Q8CD54 2822 aa10.41□□□□□ -0.74
Gtf3c4-204ENSMUST00000171404 Gm7138L7N2C3 230 aa10.41□□□□□ -0.74
Gtf3c4-204ENSMUST00000171404 Gm3238W4VSP7 230 aa10.41□□□□□ -0.74
Gtf3c4-204ENSMUST00000171404 A330070K13RikQ8CA53 115 aa10.41□□□□□ -0.74
Gtf3c4-204ENSMUST00000171404 C530025M09RikF6RGA8 229 aa10.39□□□□□ -0.75
Gtf3c4-204ENSMUST00000171404 Piezo1E2JF22 2547 aa10.39□□□□□ -0.75
Gtf3c4-204ENSMUST00000171404 Rps28P62858 69 aaKnown RBP10.39□□□□□ -0.75
Gtf3c4-204ENSMUST00000171404 OxtP35454 125 aa10.38□□□□□ -0.75
Gtf3c4-204ENSMUST00000171404 Sprr1bQ62267 153 aa10.37□□□□□ -0.75
Gtf3c4-204ENSMUST00000171404 Jbts17Q8CE72 3214 aa10.37□□□□□ -0.75
Gtf3c4-204ENSMUST00000171404 AY074887Q8R5F9 132 aa10.34□□□□□ -0.75
Gtf3c4-204ENSMUST00000171404 Ttc28Q80XJ3 2450 aa10.34□□□□□ -0.75
Gtf3c4-204ENSMUST00000171404 Chd8Q09XV5 2582 aaKnown RBP10.33□□□□□ -0.75
Gtf3c4-204ENSMUST00000171404 PtprqP0C5E4 2300 aa10.33□□□□□ -0.76
Gtf3c4-204ENSMUST00000171404 Krtap26-1Q9D7N2 215 aa10.33□□□□□ -0.76
Gtf3c4-204ENSMUST00000171404 Cypt15B1AXS0 87 aa10.32□□□□□ -0.76
Gtf3c4-204ENSMUST00000171404 Gm7137J3QMW1 236 aa10.3□□□□□ -0.76
Gtf3c4-204ENSMUST00000171404 Hivep3A2A884 2348 aa10.3□□□□□ -0.76
Gtf3c4-204ENSMUST00000171404 Psors1c2Q80ZC9 134 aa10.28□□□□□ -0.76
Gtf3c4-204ENSMUST00000171404 Dmbt1Q60997 2085 aa10.27□□□□□ -0.77
Gtf3c4-204ENSMUST00000171404 Phxr4P15974 95 aa10.24□□□□□ -0.77
Gtf3c4-204ENSMUST00000171404 Spink7Q6IE32 76 aa10.24□□□□□ -0.77
Gtf3c4-204ENSMUST00000171404 Gm3880A0A1B0GSB3 72 aa10.24□□□□□ -0.77
Gtf3c4-204ENSMUST00000171404 Lypd5Q9D7Z7 256 aa10.24□□□□□ -0.77
Gtf3c4-204ENSMUST00000171404 Gm7276Q3TYW4 209 aa10.23□□□□□ -0.77
Gtf3c4-204ENSMUST00000171404 Uqcr11Q9CPX8 56 aa10.23□□□□□ -0.77
Gtf3c4-204ENSMUST00000171404 AW011738F6S7Q2 159 aa10.22□□□□□ -0.77
Gtf3c4-204ENSMUST00000171404 Fam229bQ8CF36 80 aa10.21□□□□□ -0.78
Gtf3c4-204ENSMUST00000171404 CriptO70333 101 aa10.2□□□□□ -0.78
Gtf3c4-204ENSMUST00000171404 Smim29Q8R043 75 aa10.2□□□□□ -0.78
Gtf3c4-204ENSMUST00000171404 2310034C09RikQ9D746 214 aa10.18□□□□□ -0.78
Gtf3c4-204ENSMUST00000171404 Chtf8P0CG14 533 aa10.18□□□□□ -0.78
Gtf3c4-204ENSMUST00000171404 Gm9821Q8K076 103 aa10.18□□□□□ -0.78
Gtf3c4-204ENSMUST00000171404 Gm26620Q9CY65 116 aa10.16□□□□□ -0.78
Gtf3c4-204ENSMUST00000171404 Gm21798J3QNU5 87 aa10.14□□□□□ -0.79
Gtf3c4-204ENSMUST00000171404 Zfp462B1AWL2 2495 aaKnown RBP10.12□□□□□ -0.79
Gtf3c4-204ENSMUST00000171404 Dnah12Q3V0Q1 3086 aa10.12□□□□□ -0.79
Gtf3c4-204ENSMUST00000171404 Cep192E9Q4Y4 2514 aaKnown RBP10.12□□□□□ -0.79
Gtf3c4-204ENSMUST00000171404 Gm9508A0A1W2P7W0 230 aa10.12□□□□□ -0.79
Gtf3c4-204ENSMUST00000171404 Gm42715A0A087WP63 3095 aaKnown RBP10.1□□□□□ -0.79
Gtf3c4-204ENSMUST00000171404 Fam104aA2A6P4 185 aa10.08□□□□□ -0.8
Gtf3c4-204ENSMUST00000171404 Gm4491E0CX42 125 aa10.08□□□□□ -0.8
Gtf3c4-204ENSMUST00000171404 6030445D17RikE9Q8F9 148 aa10.07□□□□□ -0.8
Gtf3c4-204ENSMUST00000171404 TrrapQ80YV3 2565 aaKnown RBP10.06□□□□□ -0.8
Gtf3c4-204ENSMUST00000171404 Tln1P26039 2541 aaKnown RBP10.05□□□□□ -0.8
Gtf3c4-204ENSMUST00000171404 Gm11213A0A1B0GR83 88 aa10.03□□□□□ -0.8
Gtf3c4-204ENSMUST00000171404 Krtap15-1Q9QZU5 150 aa10.02□□□□□ -0.81
Gtf3c4-204ENSMUST00000171404 Lelp1Q9DAE3 120 aa10.01□□□□□ -0.81
Gtf3c4-204ENSMUST00000171404 CnbpP53996 178 aaKnown RBP10.01□□□□□ -0.81
Gtf3c4-204ENSMUST00000171404 Lama3Q61789 3330 aa10□□□□□ -0.81
Gtf3c4-204ENSMUST00000171404 Zcchc13Q9D548 170 aa9.99□□□□□ -0.81
Gtf3c4-204ENSMUST00000171404 Gm9955Q8CEJ8 102 aa9.98□□□□□ -0.81
Gtf3c4-204ENSMUST00000171404 Ep400Q8CHI8 3072 aaKnown RBP9.98□□□□□ -0.81
Gtf3c4-204ENSMUST00000171404 Ptpn13Q64512 2453 aa9.97□□□□□ -0.81
Gtf3c4-204ENSMUST00000171404 Cypt14J3QPF7 87 aa9.95□□□□□ -0.82
Gtf3c4-204ENSMUST00000171404 NbdyA0A0N4SUI7 68 aa9.93□□□□□ -0.82
Gtf3c4-204ENSMUST00000171404 Bod1lE9Q6J5 3032 aa9.89□□□□□ -0.83
Gtf3c4-204ENSMUST00000171404 SetxA2AKX3 2646 aa9.87□□□□□ -0.83
Gtf3c4-204ENSMUST00000171404 Gm10643Q3URG9 111 aa9.87□□□□□ -0.83
Gtf3c4-204ENSMUST00000171404 Gm36176A0A1W2P8D5 158 aa9.85□□□□□ -0.83
Gtf3c4-204ENSMUST00000171404 CicQ924A2 2510 aa9.84□□□□□ -0.83
Gtf3c4-204ENSMUST00000171404 Epg5Q80TA9 2572 aa9.84□□□□□ -0.83
Gtf3c4-204ENSMUST00000171404 Ankrd17Q99NH0 2603 aaKnown RBP9.83□□□□□ -0.84
Gtf3c4-204ENSMUST00000171404 Gm10320E9PW43 113 aa9.82□□□□□ -0.84
Gtf3c4-204ENSMUST00000171404 Gm17349F7BGH6 99 aa9.81□□□□□ -0.84
Gtf3c4-204ENSMUST00000171404 Camk2n1Q6QWF9 78 aa9.8□□□□□ -0.84
Gtf3c4-204ENSMUST00000171404 Cep350E9Q309 3095 aa9.8□□□□□ -0.84
Gtf3c4-204ENSMUST00000171404 Usp9xP70398 2559 aaKnown RBP9.79□□□□□ -0.84
Gtf3c4-204ENSMUST00000171404 Setd2E9Q5F9 2537 aa9.75□□□□□ -0.85
Gtf3c4-204ENSMUST00000171404 CenpfE9Q3P4 2997 aaKnown RBP9.74□□□□□ -0.85
Gtf3c4-204ENSMUST00000171404 Usp34Q6ZQ93 3582 aa9.74□□□□□ -0.85
Gtf3c4-204ENSMUST00000171404 Gm10065F6TJM2 114 aa9.73□□□□□ -0.85
Gtf3c4-204ENSMUST00000171404 Bahcc1Q3UHR0 2643 aa9.73□□□□□ -0.85
Gtf3c4-204ENSMUST00000171404 Odf3bQ5M8M2 238 aa9.7□□□□□ -0.86
Gtf3c4-204ENSMUST00000171404 Prune2Q52KR3 3084 aa9.7□□□□□ -0.86
Gtf3c4-204ENSMUST00000171404 Fam229aB2KGE5 128 aa9.67□□□□□ -0.86
Gtf3c4-204ENSMUST00000171404 MtorQ9JLN9 2549 aa9.67□□□□□ -0.86
Gtf3c4-204ENSMUST00000171404 Gm10139O88245 57 aa9.66□□□□□ -0.86
Gtf3c4-204ENSMUST00000171404 Gm37013Q8K491 104 aa9.65□□□□□ -0.86
Gtf3c4-204ENSMUST00000171404 Cystm1Q8K353 104 aa9.64□□□□□ -0.87
Gtf3c4-204ENSMUST00000171404 Nsd1O88491 2588 aaKnown RBP9.63□□□□□ -0.87
Gtf3c4-204ENSMUST00000171404 Gm9507D3Z5T3 223 aa9.6□□□□□ -0.87
Gtf3c4-204ENSMUST00000171404 Zfhx3Q61329 3726 aa9.6□□□□□ -0.87
Gtf3c4-204ENSMUST00000171404 PolqQ8CGS6 2544 aa9.58□□□□□ -0.88
Gtf3c4-204ENSMUST00000171404 Abca12E9Q876 2595 aa9.55□□□□□ -0.88
Gtf3c4-204ENSMUST00000171404 Ranbp2Q9ERU9 3053 aaKnown RBP9.54□□□□□ -0.88
Gtf3c4-204ENSMUST00000171404 Usp9yF8VPU6 2556 aa9.54□□□□□ -0.88
Gtf3c4-204ENSMUST00000171404 Unc79Q0KK59 2596 aa9.53□□□□□ -0.88
Gtf3c4-204ENSMUST00000171404 Sprr1aQ62266 144 aa9.51□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 86.5 ms