RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Gm16381A0A1Y7VKT9 73 aa9.67□□□□□ -0.86
Nup88-202ENSMUST00000108530 Gm17577J3QNF7 156 aa9.67□□□□□ -0.86
Nup88-202ENSMUST00000108530 Defa25Q5G864 92 aa9.67□□□□□ -0.86
Nup88-202ENSMUST00000108530 4930524J08RikQ9CUJ5 163 aa9.67□□□□□ -0.86
Nup88-202ENSMUST00000108530 Dnah11E9Q7N9 4488 aa9.67□□□□□ -0.86
Nup88-202ENSMUST00000108530 Gm9805F6YK59 57 aa9.65□□□□□ -0.86
Nup88-202ENSMUST00000108530 Smim26Q3V460 107 aa9.65□□□□□ -0.87
Nup88-202ENSMUST00000108530 BB014433Q8C5R5 389 aa9.65□□□□□ -0.87
Nup88-202ENSMUST00000108530 Csdc2Q91YQ3 154 aa9.65□□□□□ -0.87
Nup88-202ENSMUST00000108530 Gm10320E9PW43 113 aa9.64□□□□□ -0.87
Nup88-202ENSMUST00000108530 P01819 144 aa9.64□□□□□ -0.87
Nup88-202ENSMUST00000108530 Defa4P28311 92 aa9.64□□□□□ -0.87
Nup88-202ENSMUST00000108530 D130052B06RikQ3UW13 202 aa9.64□□□□□ -0.87
Nup88-202ENSMUST00000108530 BaalcQ8VHV1 145 aa9.64□□□□□ -0.87
Nup88-202ENSMUST00000108530 Rpl39lQ9CQD0 51 aa9.64□□□□□ -0.87
Nup88-202ENSMUST00000108530 Igkv4-58A0A0G2JGI6 119 aa9.64□□□□□ -0.87
Nup88-202ENSMUST00000108530 Xcl1P47993 114 aa9.63□□□□□ -0.87
Nup88-202ENSMUST00000108530 E130218I03RikA0A0U1RNU5 63 aa9.63□□□□□ -0.87
Nup88-202ENSMUST00000108530 CnbpP53996 178 aaKnown RBP9.63□□□□□ -0.87
Nup88-202ENSMUST00000108530 Gm9918Q8BUR5 174 aa9.63□□□□□ -0.87
Nup88-202ENSMUST00000108530 4930519P11RikQ9CUJ8 166 aa9.63□□□□□ -0.87
Nup88-202ENSMUST00000108530 Igkv3-12A0A140T8P0 119 aa9.62□□□□□ -0.87
Nup88-202ENSMUST00000108530 SmcpP15265 143 aa9.62□□□□□ -0.87
Nup88-202ENSMUST00000108530 Smim29Q8R043 75 aa9.62□□□□□ -0.87
Nup88-202ENSMUST00000108530 Igf1P05017 153 aa9.61□□□□□ -0.87
Nup88-202ENSMUST00000108530 Sprr1aQ62266 144 aa9.61□□□□□ -0.87
Nup88-202ENSMUST00000108530 Fam168bQ80XQ8 194 aa9.61□□□□□ -0.87
Nup88-202ENSMUST00000108530 Gm7102J3QQ10 178 aa9.6□□□□□ -0.87
Nup88-202ENSMUST00000108530 Znf414Q9DCK4 299 aa9.6□□□□□ -0.87
Nup88-202ENSMUST00000108530 Gm20726G3UX18 150 aa9.59□□□□□ -0.87
Nup88-202ENSMUST00000108530 Cdk2ap2Q9CPY4 127 aa9.59□□□□□ -0.87
Nup88-202ENSMUST00000108530 Igkv3-2A0A075B5P0 119 aa9.59□□□□□ -0.87
Nup88-202ENSMUST00000108530 SvipQ3UZP4 77 aa9.58□□□□□ -0.88
Nup88-202ENSMUST00000108530 Dnah9B1AR51 4484 aa9.58□□□□□ -0.88
Nup88-202ENSMUST00000108530 Igkv2-109A0A075B5K6 120 aa9.58□□□□□ -0.88
Nup88-202ENSMUST00000108530 Defb40Q70KL2 73 aa9.58□□□□□ -0.88
Nup88-202ENSMUST00000108530 2310034G01RikA0A286YDL3 209 aa9.57□□□□□ -0.88
Nup88-202ENSMUST00000108530 Cd164Q9R0L9 197 aa9.57□□□□□ -0.88
Nup88-202ENSMUST00000108530 Gm10770F7D043 238 aa9.56□□□□□ -0.88
Nup88-202ENSMUST00000108530 4930535I16RikQ9CUI2 172 aa9.56□□□□□ -0.88
Nup88-202ENSMUST00000108530 Q9DAA7 145 aa9.55□□□□□ -0.88
Nup88-202ENSMUST00000108530 Gm11627A6PWP4 55 aa9.55□□□□□ -0.88
Nup88-202ENSMUST00000108530 Acyp1P56376 99 aa9.55□□□□□ -0.88
Nup88-202ENSMUST00000108530 Nupr2Q497P3 102 aa9.55□□□□□ -0.88
Nup88-202ENSMUST00000108530 Mrpl52Q9D0Y8 121 aa9.55□□□□□ -0.88
Nup88-202ENSMUST00000108530 ScxQ64124 207 aa9.54□□□□□ -0.88
Nup88-202ENSMUST00000108530 Gm10837Q3UTT8 145 aa9.53□□□□□ -0.88
Nup88-202ENSMUST00000108530 Pou2af1Q64693 256 aa9.53□□□□□ -0.88
Nup88-202ENSMUST00000108530 Cystm1Q8K353 104 aa9.52□□□□□ -0.88
Nup88-202ENSMUST00000108530 Fam19a5Q91WE9 132 aa9.52□□□□□ -0.88
Nup88-202ENSMUST00000108530 Msrb1Q9JLC3 116 aa9.52□□□□□ -0.88
Nup88-202ENSMUST00000108530 Plac8Q9JI48 112 aa9.52□□□□□ -0.89
Nup88-202ENSMUST00000108530 Dnah7aE9Q0T8 4024 aa9.52□□□□□ -0.89
Nup88-202ENSMUST00000108530 Ifitm6A0A1B0GS75 124 aa9.51□□□□□ -0.89
Nup88-202ENSMUST00000108530 7530416G11RikJ3QJX6 159 aa9.51□□□□□ -0.89
Nup88-202ENSMUST00000108530 Ighv10-1A0A0B4J1J6 119 aa9.51□□□□□ -0.89
Nup88-202ENSMUST00000108530 Defa23Q5G866 93 aa9.51□□□□□ -0.89
Nup88-202ENSMUST00000108530 Defb37Q7TMD2 62 aa9.51□□□□□ -0.89
Nup88-202ENSMUST00000108530 Wfdc6bF6ULY1 148 aa9.5□□□□□ -0.89
Nup88-202ENSMUST00000108530 Defa7P50705 93 aa9.5□□□□□ -0.89
Nup88-202ENSMUST00000108530 BC048502Q80Y74 154 aa9.5□□□□□ -0.89
Nup88-202ENSMUST00000108530 P84750 121 aa9.5□□□□□ -0.89
Nup88-202ENSMUST00000108530 Obox2E9PXV9 151 aa9.49□□□□□ -0.89
Nup88-202ENSMUST00000108530 Naa38Q9D2U5 125 aa9.49□□□□□ -0.89
Nup88-202ENSMUST00000108530 Fam19a1Q7TPG8 133 aa9.49□□□□□ -0.89
Nup88-202ENSMUST00000108530 Ly6g6cQ9Z1Q4 126 aa9.49□□□□□ -0.89
Nup88-202ENSMUST00000108530 2310050C09RikG5E8Z3 280 aa9.47□□□□□ -0.89
Nup88-202ENSMUST00000108530 Hist1h4aP62806 103 aaKnown RBP9.47□□□□□ -0.89
Nup88-202ENSMUST00000108530 Defa27F2Z403 93 aa9.46□□□□□ -0.89
Nup88-202ENSMUST00000108530 Elof1P60003 83 aa9.46□□□□□ -0.89
Nup88-202ENSMUST00000108530 SycnQ8VCK7 134 aa9.46□□□□□ -0.89
Nup88-202ENSMUST00000108530 HrnrQ8VHD8 2496 aa9.46□□□□□ -0.89
Nup88-202ENSMUST00000108530 Igkv1-122A0A140T8M9 119 aa9.45□□□□□ -0.9
Nup88-202ENSMUST00000108530 Defa21Q8C1P2 93 aa9.45□□□□□ -0.9
Nup88-202ENSMUST00000108530 PscaP57096 123 aa9.45□□□□□ -0.9
Nup88-202ENSMUST00000108530 4930518I15RikQ3V2W7 57 aa9.44□□□□□ -0.9
Nup88-202ENSMUST00000108530 Dmac1Q9CQ00 111 aa9.44□□□□□ -0.9
Nup88-202ENSMUST00000108530 Prol1E9PYQ4 312 aa9.43□□□□□ -0.9
Nup88-202ENSMUST00000108530 Scgb1b2O35176 93 aa9.42□□□□□ -0.9
Nup88-202ENSMUST00000108530 MplkipQ9D011 178 aa9.42□□□□□ -0.9
Nup88-202ENSMUST00000108530 Krtap10-4Q08EG8 221 aa9.41□□□□□ -0.9
Nup88-202ENSMUST00000108530 U90926O08546 118 aa9.41□□□□□ -0.9
Nup88-202ENSMUST00000108530 1700012A03RikQ9DAF1 130 aa9.41□□□□□ -0.9
Nup88-202ENSMUST00000108530 Dnah5Q8VHE6 4621 aa9.4□□□□□ -0.9
Nup88-202ENSMUST00000108530 Gm7276Q3TYW4 209 aa9.4□□□□□ -0.9
Nup88-202ENSMUST00000108530 Lamtor3O88653 124 aa9.39□□□□□ -0.91
Nup88-202ENSMUST00000108530 Igkv8-26A0A075B5N5 123 aa9.39□□□□□ -0.91
Nup88-202ENSMUST00000108530 Ntn5Q3UQ22 452 aa9.38□□□□□ -0.91
Nup88-202ENSMUST00000108530 9530003J23RikQ8BM26 151 aa9.38□□□□□ -0.91
Nup88-202ENSMUST00000108530 Dnah7cA0A087WR13 4024 aa9.38□□□□□ -0.91
Nup88-202ENSMUST00000108530 Tmem254aP0DN89 123 aa9.38□□□□□ -0.91
Nup88-202ENSMUST00000108530 Tmem254bP0DN90 123 aa9.38□□□□□ -0.91
Nup88-202ENSMUST00000108530 Tmem254cP0DN91 123 aa9.38□□□□□ -0.91
Nup88-202ENSMUST00000108530 Ighv10-3A0A075B5T6 119 aa9.37□□□□□ -0.91
Nup88-202ENSMUST00000108530 Igkv8-27A0A0G2JF28 120 aa9.37□□□□□ -0.91
Nup88-202ENSMUST00000108530 Igkv8-30A0A140T8M3 121 aa9.37□□□□□ -0.91
Nup88-202ENSMUST00000108530 A0A286YE02 88 aa9.37□□□□□ -0.91
Nup88-202ENSMUST00000108530 Tmem243B2RVB9 118 aa9.37□□□□□ -0.91
Nup88-202ENSMUST00000108530 Gm11011D3Z3L9 86 aa9.37□□□□□ -0.91
Nup88-202ENSMUST00000108530 Igkv8-21A0A140T8P7 120 aa9.36□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 49.8 ms