RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Piezo2Q8CD54 2822 aa9.73□□□□□ -0.85
Pcdha1-201ENSMUST00000070797 Ptpn13Q64512 2453 aa9.73□□□□□ -0.85
Pcdha1-201ENSMUST00000070797 C530025M09RikF6RGA8 229 aa9.72□□□□□ -0.85
Pcdha1-201ENSMUST00000070797 Sprr4Q8CGN8 76 aa9.72□□□□□ -0.85
Pcdha1-201ENSMUST00000070797 Defb39Q70KL3 74 aa9.71□□□□□ -0.86
Pcdha1-201ENSMUST00000070797 Gm10642Q3TWM1 71 aa9.71□□□□□ -0.86
Pcdha1-201ENSMUST00000070797 Krtap11-1E9Q2E9 183 aa9.7□□□□□ -0.86
Pcdha1-201ENSMUST00000070797 Mp68P56379 58 aa9.7□□□□□ -0.86
Pcdha1-201ENSMUST00000070797 Q8BGJ3 129 aa9.7□□□□□ -0.86
Pcdha1-201ENSMUST00000070797 Defb11Q8R2I7 77 aa9.7□□□□□ -0.86
Pcdha1-201ENSMUST00000070797 Gm27235Q3UW50 83 aa9.69□□□□□ -0.86
Pcdha1-201ENSMUST00000070797 Chtf8P0CG14 533 aa9.68□□□□□ -0.86
Pcdha1-201ENSMUST00000070797 1600014C23RikQ9DAX4 101 aa9.68□□□□□ -0.86
Pcdha1-201ENSMUST00000070797 Phf5aP83870 110 aaKnown RBP9.64□□□□□ -0.87
Pcdha1-201ENSMUST00000070797 AplnQ9R0R4 77 aa9.63□□□□□ -0.87
Pcdha1-201ENSMUST00000070797 TrrapQ80YV3 2565 aaKnown RBP9.63□□□□□ -0.87
Pcdha1-201ENSMUST00000070797 Usp9xP70398 2559 aaKnown RBP9.62□□□□□ -0.87
Pcdha1-201ENSMUST00000070797 SmcpP15265 143 aa9.62□□□□□ -0.87
Pcdha1-201ENSMUST00000070797 Fam168bQ80XQ8 194 aa9.61□□□□□ -0.87
Pcdha1-201ENSMUST00000070797 Cystm1Q8K353 104 aa9.6□□□□□ -0.87
Pcdha1-201ENSMUST00000070797 Spata3Q9D9T6 193 aa9.58□□□□□ -0.88
Pcdha1-201ENSMUST00000070797 Lypd5Q9D7Z7 256 aa9.57□□□□□ -0.88
Pcdha1-201ENSMUST00000070797 SetxA2AKX3 2646 aa9.57□□□□□ -0.88
Pcdha1-201ENSMUST00000070797 Defb1P56386 69 aa9.57□□□□□ -0.88
Pcdha1-201ENSMUST00000070797 Phxr5P08399 672 aa9.56□□□□□ -0.88
Pcdha1-201ENSMUST00000070797 Zfp462B1AWL2 2495 aaKnown RBP9.53□□□□□ -0.88
Pcdha1-201ENSMUST00000070797 Cypt15B1AXS0 87 aa9.53□□□□□ -0.88
Pcdha1-201ENSMUST00000070797 Krtap24-1G3X9A2 248 aa9.52□□□□□ -0.89
Pcdha1-201ENSMUST00000070797 Nav3Q80TN7 2359 aa9.52□□□□□ -0.89
Pcdha1-201ENSMUST00000070797 Fam104aA2A6P4 185 aa9.48□□□□□ -0.89
Pcdha1-201ENSMUST00000070797 Gm26620Q9CY65 116 aa9.48□□□□□ -0.89
Pcdha1-201ENSMUST00000070797 Gpr15lA0A0B4J1N3 78 aa9.47□□□□□ -0.89
Pcdha1-201ENSMUST00000070797 Setd2E9Q5F9 2537 aa9.46□□□□□ -0.89
Pcdha1-201ENSMUST00000070797 RetnlbQ99P86 105 aa9.45□□□□□ -0.9
Pcdha1-201ENSMUST00000070797 Spaca4Q80ZQ0 127 aa9.45□□□□□ -0.9
Pcdha1-201ENSMUST00000070797 Gm10320E9PW43 113 aa9.44□□□□□ -0.9
Pcdha1-201ENSMUST00000070797 Gm3646F6S692 53 aa9.43□□□□□ -0.9
Pcdha1-201ENSMUST00000070797 PtprqP0C5E4 2300 aa9.43□□□□□ -0.9
Pcdha1-201ENSMUST00000070797 CenpfE9Q3P4 2997 aaKnown RBP9.42□□□□□ -0.9
Pcdha1-201ENSMUST00000070797 PolqQ8CGS6 2544 aa9.42□□□□□ -0.9
Pcdha1-201ENSMUST00000070797 Gm21798J3QNU5 87 aa9.41□□□□□ -0.9
Pcdha1-201ENSMUST00000070797 Smim29Q8R043 75 aa9.41□□□□□ -0.9
Pcdha1-201ENSMUST00000070797 Zcchc13Q9D548 170 aa9.41□□□□□ -0.9
Pcdha1-201ENSMUST00000070797 1700042G07RikB1AUF7 90 aa9.37□□□□□ -0.91
Pcdha1-201ENSMUST00000070797 Gm3250E9Q1M3 230 aa9.37□□□□□ -0.91
Pcdha1-201ENSMUST00000070797 4933415A04RikQ9D443 101 aa9.37□□□□□ -0.91
Pcdha1-201ENSMUST00000070797 AW011738F6S7Q2 159 aa9.36□□□□□ -0.91
Pcdha1-201ENSMUST00000070797 Cep192E9Q4Y4 2514 aaKnown RBP9.36□□□□□ -0.91
Pcdha1-201ENSMUST00000070797 Rnase13Q5GAM7 153 aa9.36□□□□□ -0.91
Pcdha1-201ENSMUST00000070797 MtorQ9JLN9 2549 aa9.35□□□□□ -0.91
Pcdha1-201ENSMUST00000070797 Dnah12Q3V0Q1 3086 aa9.34□□□□□ -0.91
Pcdha1-201ENSMUST00000070797 Bahcc1Q3UHR0 2643 aa9.33□□□□□ -0.92
Pcdha1-201ENSMUST00000070797 Ep400Q8CHI8 3072 aaKnown RBP9.32□□□□□ -0.92
Pcdha1-201ENSMUST00000070797 2310034C09RikQ9D746 214 aa9.32□□□□□ -0.92
Pcdha1-201ENSMUST00000070797 A730071L15RikQ8C4X0 137 aa9.3□□□□□ -0.92
Pcdha1-201ENSMUST00000070797 Epg5Q80TA9 2572 aa9.28□□□□□ -0.92
Pcdha1-201ENSMUST00000070797 Gm9821Q8K076 103 aa9.27□□□□□ -0.93
Pcdha1-201ENSMUST00000070797 Defb9Q8R2I6 67 aa9.27□□□□□ -0.93
Pcdha1-201ENSMUST00000070797 CriptO70333 101 aa9.26□□□□□ -0.93
Pcdha1-201ENSMUST00000070797 Cep350E9Q309 3095 aa9.25□□□□□ -0.93
Pcdha1-201ENSMUST00000070797 Cypt14J3QPF7 87 aa9.24□□□□□ -0.93
Pcdha1-201ENSMUST00000070797 Myo18bE9PV66 2605 aa9.23□□□□□ -0.93
Pcdha1-201ENSMUST00000070797 6030445D17RikE9Q8F9 148 aa9.23□□□□□ -0.93
Pcdha1-201ENSMUST00000070797 Gm42715A0A087WP63 3095 aaKnown RBP9.23□□□□□ -0.93
Pcdha1-201ENSMUST00000070797 PcntP48725 2898 aa9.23□□□□□ -0.93
Pcdha1-201ENSMUST00000070797 Dmbt1Q60997 2085 aa9.22□□□□□ -0.93
Pcdha1-201ENSMUST00000070797 Unc79Q0KK59 2596 aa9.21□□□□□ -0.93
Pcdha1-201ENSMUST00000070797 Gm3880A0A1B0GSB3 72 aa9.21□□□□□ -0.94
Pcdha1-201ENSMUST00000070797 Gm9955Q8CEJ8 102 aa9.21□□□□□ -0.94
Pcdha1-201ENSMUST00000070797 Abca12E9Q876 2595 aa9.2□□□□□ -0.94
Pcdha1-201ENSMUST00000070797 Gm37013Q8K491 104 aa9.2□□□□□ -0.94
Pcdha1-201ENSMUST00000070797 Pla2g10Q9QXX3 151 aa9.19□□□□□ -0.94
Pcdha1-201ENSMUST00000070797 UtrnE9Q6R7 3430 aa9.18□□□□□ -0.94
Pcdha1-201ENSMUST00000070797 Gm10139O88245 57 aa9.15□□□□□ -0.94
Pcdha1-201ENSMUST00000070797 Gm20538F6Z9R1 75 aa9.12□□□□□ -0.95
Pcdha1-201ENSMUST00000070797 Gm11565A2A4M7 156 aa9.1□□□□□ -0.95
Pcdha1-201ENSMUST00000070797 Anapc11Q9CPX9 84 aa9.09□□□□□ -0.95
Pcdha1-201ENSMUST00000070797 OxtP35454 125 aa9.08□□□□□ -0.96
Pcdha1-201ENSMUST00000070797 CicQ924A2 2510 aa9.07□□□□□ -0.96
Pcdha1-201ENSMUST00000070797 Plac8Q9JI48 112 aa9.07□□□□□ -0.96
Pcdha1-201ENSMUST00000070797 FlnbQ80X90 2602 aaKnown RBP9.05□□□□□ -0.96
Pcdha1-201ENSMUST00000070797 Usp9yF8VPU6 2556 aa9.04□□□□□ -0.96
Pcdha1-201ENSMUST00000070797 Ankrd17Q99NH0 2603 aaKnown RBP9.04□□□□□ -0.96
Pcdha1-201ENSMUST00000070797 Sprr1aQ62266 144 aa9.04□□□□□ -0.96
Pcdha1-201ENSMUST00000070797 Tnrc18Q80WC3 2878 aa9.02□□□□□ -0.96
Pcdha1-201ENSMUST00000070797 NbdyA0A0N4SUI7 68 aa9.01□□□□□ -0.97
Pcdha1-201ENSMUST00000070797 Odf3bQ5M8M2 238 aa9.01□□□□□ -0.97
Pcdha1-201ENSMUST00000070797 Gm10065F6TJM2 114 aa9.01□□□□□ -0.97
Pcdha1-201ENSMUST00000070797 Zfp292Q9Z2U2 2698 aa8.97□□□□□ -0.97
Pcdha1-201ENSMUST00000070797 Ankrd11E9Q4F7 2643 aa8.97□□□□□ -0.97
Pcdha1-201ENSMUST00000070797 Gm4491E0CX42 125 aa8.96□□□□□ -0.97
Pcdha1-201ENSMUST00000070797 Gm3233E9Q2H5 230 aa8.96□□□□□ -0.97
Pcdha1-201ENSMUST00000070797 Gm16253D3Z167 63 aa8.94□□□□□ -0.98
Pcdha1-201ENSMUST00000070797 FasnP19096 2504 aaKnown RBP8.89□□□□□ -0.99
Pcdha1-201ENSMUST00000070797 HttP42859 3119 aa8.88□□□□□ -0.99
Pcdha1-201ENSMUST00000070797 Romo1P60603 79 aa8.87□□□□□ -0.99
Pcdha1-201ENSMUST00000070797 Gm2310J3QNJ2 377 aa8.84□□□□□ -0.99
Pcdha1-201ENSMUST00000070797 Usp34Q6ZQ93 3582 aa8.84□□□□□ -0.99
Pcdha1-201ENSMUST00000070797 Chd7A2AJK6 2986 aaKnown RBP8.83□□□□□ -1
Pcdha1-201ENSMUST00000070797 Nbeal1E9PYP2 2688 aa8.83□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 60.9 ms