RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 A330070K13RikQ8CA53 115 aa9.87□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Cd164Q9R0L9 197 aa9.87□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Defa28D3Z1V9 94 aa9.86□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Pou2af1Q64693 256 aa9.86□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Tep1P97499 2629 aa9.86□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Igkv3-1A0A075B5P1 119 aa9.86□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Gm37389A0A0A6YW05 95 aa9.85□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Igkv4-92A0A0B4J1I2 117 aa9.85□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Prr15lQ8JZM2 100 aa9.85□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Cdk2ap2Q9CPY4 127 aa9.85□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Akap13E9Q394 2776 aa9.84□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Muc2Q80Z19 2680 aa9.84□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 D730001G18RikA0A087WQU7 115 aa9.84□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Rif1Q6PR54 2419 aaKnown RBP9.84□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Sprr2jO70561 109 aa9.84□□□□□ -0.83
Ushbp1-201ENSMUST00000049184 Bahcc1Q3UHR0 2643 aa9.83□□□□□ -0.84
Ushbp1-201ENSMUST00000049184 Bean1Q9EQG5 255 aa9.83□□□□□ -0.84
Ushbp1-201ENSMUST00000049184 Igkv1-122A0A140T8M9 119 aa9.82□□□□□ -0.84
Ushbp1-201ENSMUST00000049184 Cox7b2Q9D2H1 82 aa9.82□□□□□ -0.84
Ushbp1-201ENSMUST00000049184 Igkv3-2A0A075B5P0 119 aa9.82□□□□□ -0.84
Ushbp1-201ENSMUST00000049184 A730009L09RikA0A1B0GS82 72 aa9.82□□□□□ -0.84
Ushbp1-201ENSMUST00000049184 Ankrd17Q99NH0 2603 aaKnown RBP9.81□□□□□ -0.84
Ushbp1-201ENSMUST00000049184 Sfta2E9PXB6 77 aa9.81□□□□□ -0.84
Ushbp1-201ENSMUST00000049184 BsnO88737 3942 aa9.81□□□□□ -0.84
Ushbp1-201ENSMUST00000049184 Cmc4Q61908 68 aa9.8□□□□□ -0.84
Ushbp1-201ENSMUST00000049184 Gm9767G3X930 207 aa9.79□□□□□ -0.84
Ushbp1-201ENSMUST00000049184 Gm7276Q3TYW4 209 aa9.79□□□□□ -0.84
Ushbp1-201ENSMUST00000049184 Gm5617Q91VN2 117 aa9.79□□□□□ -0.84
Ushbp1-201ENSMUST00000049184 Pdzd2E9Q1M1 2796 aa9.78□□□□□ -0.84
Ushbp1-201ENSMUST00000049184 Ighv8-13A0A075B5Y0 101 aa9.77□□□□□ -0.84
Ushbp1-201ENSMUST00000049184 A0A286YE02 88 aa9.76□□□□□ -0.85
Ushbp1-201ENSMUST00000049184 Spint4Q9D263 159 aa9.76□□□□□ -0.85
Ushbp1-201ENSMUST00000049184 Krtap24-1G3X9A2 248 aa9.76□□□□□ -0.85
Ushbp1-201ENSMUST00000049184 6430550D23RikE9Q1X6 194 aa9.75□□□□□ -0.85
Ushbp1-201ENSMUST00000049184 Camk2n2Q78WH7 79 aa9.75□□□□□ -0.85
Ushbp1-201ENSMUST00000049184 Trav14-1A0A0G2JF94 121 aa9.75□□□□□ -0.85
Ushbp1-201ENSMUST00000049184 C130032M10RikQ8C888 123 aa9.75□□□□□ -0.85
Ushbp1-201ENSMUST00000049184 Cox6a2P43023 97 aa9.74□□□□□ -0.85
Ushbp1-201ENSMUST00000049184 Defb2P82020 71 aa9.74□□□□□ -0.85
Ushbp1-201ENSMUST00000049184 Coa6Q8BGD8 79 aa9.74□□□□□ -0.85
Ushbp1-201ENSMUST00000049184 A930002H24RikQ8C8Y3 163 aa9.74□□□□□ -0.85
Ushbp1-201ENSMUST00000049184 Smim29Q8R043 75 aa9.74□□□□□ -0.85
Ushbp1-201ENSMUST00000049184 Cdc42se1Q8BHL7 80 aa9.74□□□□□ -0.85
Ushbp1-201ENSMUST00000049184 Mast4Q811L6 2618 aa9.73□□□□□ -0.85
Ushbp1-201ENSMUST00000049184 CrygfQ9CXV3 174 aa9.73□□□□□ -0.85
Ushbp1-201ENSMUST00000049184 Snhg11Q4G0K9 87 aa9.71□□□□□ -0.85
Ushbp1-201ENSMUST00000049184 Sprr4Q8CGN8 76 aa9.71□□□□□ -0.85
Ushbp1-201ENSMUST00000049184 Tenm3Q9WTS6 2715 aa9.71□□□□□ -0.86
Ushbp1-201ENSMUST00000049184 Brwd1Q921C3 2304 aa9.71□□□□□ -0.86
Ushbp1-201ENSMUST00000049184 Gm10197F6QEY5 67 aa9.71□□□□□ -0.86
Ushbp1-201ENSMUST00000049184 Mrpl34Q99N91 92 aa9.7□□□□□ -0.86
Ushbp1-201ENSMUST00000049184 NipblQ6KCD5 2798 aaKnown RBP9.7□□□□□ -0.86
Ushbp1-201ENSMUST00000049184 Col7a1Q63870 2944 aa9.69□□□□□ -0.86
Ushbp1-201ENSMUST00000049184 Igkv8-19A0A0G2JFN8 121 aa9.68□□□□□ -0.86
Ushbp1-201ENSMUST00000049184 AI606181Q8C7B9 129 aa9.68□□□□□ -0.86
Ushbp1-201ENSMUST00000049184 Defb12Q8K4N3 78 aa9.68□□□□□ -0.86
Ushbp1-201ENSMUST00000049184 TrrapQ80YV3 2565 aaKnown RBP9.68□□□□□ -0.86
Ushbp1-201ENSMUST00000049184 Unc79Q0KK59 2596 aa9.67□□□□□ -0.86
Ushbp1-201ENSMUST00000049184 Hspg2Q05793 3707 aaKnown RBP9.66□□□□□ -0.86
Ushbp1-201ENSMUST00000049184 Ank2Q8C8R3 3898 aa9.66□□□□□ -0.86
Ushbp1-201ENSMUST00000049184 FlnaQ8BTM8 2647 aaKnown RBP9.66□□□□□ -0.86
Ushbp1-201ENSMUST00000049184 Reg3bP35230 175 aa9.65□□□□□ -0.86
Ushbp1-201ENSMUST00000049184 Gm44790A0A0N4SV91 103 aa9.65□□□□□ -0.86
Ushbp1-201ENSMUST00000049184 Defb40Q70KL2 73 aa9.65□□□□□ -0.86
Ushbp1-201ENSMUST00000049184 Igkv3-4A0A140T8Q4 119 aa9.64□□□□□ -0.87
Ushbp1-201ENSMUST00000049184 Gm16181B0V2H2 73 aa9.64□□□□□ -0.87
Ushbp1-201ENSMUST00000049184 Gm28374F6SG70 93 aa9.64□□□□□ -0.87
Ushbp1-201ENSMUST00000049184 Igkv3-10A0A0G2JGN0 119 aa9.63□□□□□ -0.87
Ushbp1-201ENSMUST00000049184 Setd2E9Q5F9 2537 aa9.62□□□□□ -0.87
Ushbp1-201ENSMUST00000049184 Coa5Q99M07 74 aa9.62□□□□□ -0.87
Ushbp1-201ENSMUST00000049184 PscaP57096 123 aa9.6□□□□□ -0.87
Ushbp1-201ENSMUST00000049184 Dmac1Q9CQ00 111 aa9.6□□□□□ -0.87
Ushbp1-201ENSMUST00000049184 Hivep3A2A884 2348 aa9.6□□□□□ -0.87
Ushbp1-201ENSMUST00000049184 MtorQ9JLN9 2549 aa9.59□□□□□ -0.87
Ushbp1-201ENSMUST00000049184 Gm17521F6QAC8 156 aa9.59□□□□□ -0.87
Ushbp1-201ENSMUST00000049184 Gm37013Q8K491 104 aa9.59□□□□□ -0.87
Ushbp1-201ENSMUST00000049184 Atox1O08997 68 aaKnown RBP9.58□□□□□ -0.88
Ushbp1-201ENSMUST00000049184 P84750 121 aa9.58□□□□□ -0.88
Ushbp1-201ENSMUST00000049184 Usp9yF8VPU6 2556 aa9.58□□□□□ -0.88
Ushbp1-201ENSMUST00000049184 Gm3250E9Q1M3 230 aa9.57□□□□□ -0.88
Ushbp1-201ENSMUST00000049184 Vpreb3D3Z6J4 130 aa9.57□□□□□ -0.88
Ushbp1-201ENSMUST00000049184 Gm12353A2AGJ4 60 aa9.55□□□□□ -0.88
Ushbp1-201ENSMUST00000049184 Zfp462B1AWL2 2495 aaKnown RBP9.53□□□□□ -0.88
Ushbp1-201ENSMUST00000049184 Fam168bQ80XQ8 194 aa9.53□□□□□ -0.88
Ushbp1-201ENSMUST00000049184 Epg5Q80TA9 2572 aa9.53□□□□□ -0.88
Ushbp1-201ENSMUST00000049184 Gm3233E9Q2H5 230 aa9.52□□□□□ -0.89
Ushbp1-201ENSMUST00000049184 Erdr1J3QMM0 206 aa9.52□□□□□ -0.89
Ushbp1-201ENSMUST00000049184 Sox16Q62247 57 aa9.52□□□□□ -0.89
Ushbp1-201ENSMUST00000049184 4933415A04RikQ9D443 101 aa9.51□□□□□ -0.89
Ushbp1-201ENSMUST00000049184 1700018G05RikA0A1B0GSI2 66 aa9.51□□□□□ -0.89
Ushbp1-201ENSMUST00000049184 Gm21886J3QJU9 214 aa9.5□□□□□ -0.89
Ushbp1-201ENSMUST00000049184 Phxr5P08399 672 aa9.5□□□□□ -0.89
Ushbp1-201ENSMUST00000049184 Gm11627A6PWP4 55 aa9.5□□□□□ -0.89
Ushbp1-201ENSMUST00000049184 Wfdc6bF6ULY1 148 aa9.5□□□□□ -0.89
Ushbp1-201ENSMUST00000049184 Obox2E9PXV9 151 aa9.49□□□□□ -0.89
Ushbp1-201ENSMUST00000049184 Igkv3-12A0A140T8P0 119 aa9.48□□□□□ -0.89
Ushbp1-201ENSMUST00000049184 A0A286YE49 62 aa9.48□□□□□ -0.89
Ushbp1-201ENSMUST00000049184 Sec61gP60060 68 aa9.48□□□□□ -0.89
Ushbp1-201ENSMUST00000049184 Ube2bP63147 152 aa9.48□□□□□ -0.89
Ushbp1-201ENSMUST00000049184 AplnQ9R0R4 77 aa9.46□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 131 ms