RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 TnxbO35452 4006 aa13.51□□□□□ -0.25
Cdx1-201ENSMUST00000025521 E130218I03RikA0A0U1RNU5 63 aa13.5□□□□□ -0.25
Cdx1-201ENSMUST00000025521 Ntn5Q3UQ22 452 aa13.5□□□□□ -0.25
Cdx1-201ENSMUST00000025521 B9d2Q3UK10 175 aa13.49□□□□□ -0.25
Cdx1-201ENSMUST00000025521 Igkv8-27A0A0G2JF28 120 aa13.48□□□□□ -0.25
Cdx1-201ENSMUST00000025521 Igkv8-30A0A140T8M3 121 aa13.48□□□□□ -0.25
Cdx1-201ENSMUST00000025521 Cd164Q9R0L9 197 aa13.48□□□□□ -0.25
Cdx1-201ENSMUST00000025521 9530003J23RikQ8BM26 151 aa13.47□□□□□ -0.25
Cdx1-201ENSMUST00000025521 BB014433Q8C5R5 389 aa13.47□□□□□ -0.25
Cdx1-201ENSMUST00000025521 Ormdl1Q921I0 153 aa13.45□□□□□ -0.26
Cdx1-201ENSMUST00000025521 Ighv2-5A0A0A6YY69 116 aa13.45□□□□□ -0.26
Cdx1-201ENSMUST00000025521 Dnah7bL7N1Y0 4068 aa13.43□□□□□ -0.26
Cdx1-201ENSMUST00000025521 Igkv3-12A0A140T8P0 119 aa13.43□□□□□ -0.26
Cdx1-201ENSMUST00000025521 Lamtor3O88653 124 aa13.43□□□□□ -0.26
Cdx1-201ENSMUST00000025521 Gm10308Q9CVR5 141 aa13.43□□□□□ -0.26
Cdx1-201ENSMUST00000025521 Pde6gP09174 87 aa13.41□□□□□ -0.26
Cdx1-201ENSMUST00000025521 Gm10735Q3US96 136 aa13.41□□□□□ -0.26
Cdx1-201ENSMUST00000025521 Wfdc6bF6ULY1 148 aa13.4□□□□□ -0.26
Cdx1-201ENSMUST00000025521 Prol1E9PYQ4 312 aa13.4□□□□□ -0.26
Cdx1-201ENSMUST00000025521 Dmac1Q9CQ00 111 aa13.4□□□□□ -0.26
Cdx1-201ENSMUST00000025521 2310061N02RikQ9D6S9 174 aa13.4□□□□□ -0.26
Cdx1-201ENSMUST00000025521 Pou2af1Q64693 256 aa13.39□□□□□ -0.27
Cdx1-201ENSMUST00000025521 Dync2h1Q45VK7 4306 aa13.39□□□□□ -0.27
Cdx1-201ENSMUST00000025521 Tmem254aP0DN89 123 aa13.38□□□□□ -0.27
Cdx1-201ENSMUST00000025521 Tmem254bP0DN90 123 aa13.38□□□□□ -0.27
Cdx1-201ENSMUST00000025521 Tmem254cP0DN91 123 aa13.38□□□□□ -0.27
Cdx1-201ENSMUST00000025521 Gm4707V9GXN5 68 aa13.38□□□□□ -0.27
Cdx1-201ENSMUST00000025521 Defa16P50714 93 aa13.37□□□□□ -0.27
Cdx1-201ENSMUST00000025521 Igsf10Q3V1M1 2594 aa13.36□□□□□ -0.27
Cdx1-201ENSMUST00000025521 Igkv8-21A0A140T8P7 120 aa13.36□□□□□ -0.27
Cdx1-201ENSMUST00000025521 Hist1h4aP62806 103 aaKnown RBP13.36□□□□□ -0.27
Cdx1-201ENSMUST00000025521 P84750 121 aa13.36□□□□□ -0.27
Cdx1-201ENSMUST00000025521 Prr13Q9CQJ5 137 aa13.36□□□□□ -0.27
Cdx1-201ENSMUST00000025521 Igf1P05017 153 aa13.35□□□□□ -0.27
Cdx1-201ENSMUST00000025521 Rbm3O89086 153 aaKnown RBP13.35□□□□□ -0.27
Cdx1-201ENSMUST00000025521 Smim29Q8R043 75 aa13.35□□□□□ -0.27
Cdx1-201ENSMUST00000025521 Obox2E9PXV9 151 aa13.32□□□□□ -0.28
Cdx1-201ENSMUST00000025521 Pcp4P63054 62 aa13.32□□□□□ -0.28
Cdx1-201ENSMUST00000025521 A730071L15RikQ8C4X0 137 aa13.32□□□□□ -0.28
Cdx1-201ENSMUST00000025521 Ubl5Q9EPV8 73 aa13.32□□□□□ -0.28
Cdx1-201ENSMUST00000025521 BaalcQ8VHV1 145 aa13.31□□□□□ -0.28
Cdx1-201ENSMUST00000025521 Defb37Q7TMD2 62 aa13.29□□□□□ -0.28
Cdx1-201ENSMUST00000025521 Fam168bQ80XQ8 194 aa13.29□□□□□ -0.28
Cdx1-201ENSMUST00000025521 Ighv2-2A0A075B5P8 116 aa13.28□□□□□ -0.28
Cdx1-201ENSMUST00000025521 P01821 116 aa13.28□□□□□ -0.28
Cdx1-201ENSMUST00000025521 Gm17349F7BGH6 99 aa13.27□□□□□ -0.28
Cdx1-201ENSMUST00000025521 Vpreb2P13373 142 aa13.27□□□□□ -0.28
Cdx1-201ENSMUST00000025521 Defa1P11477 93 aa13.27□□□□□ -0.29
Cdx1-201ENSMUST00000025521 Igkv1-122A0A140T8M9 119 aa13.25□□□□□ -0.29
Cdx1-201ENSMUST00000025521 A930002H24RikQ8C8Y3 163 aa13.25□□□□□ -0.29
Cdx1-201ENSMUST00000025521 Tmem243B2RVB9 118 aa13.25□□□□□ -0.29
Cdx1-201ENSMUST00000025521 Csmd3Q80T79 3707 aa13.23□□□□□ -0.29
Cdx1-201ENSMUST00000025521 Igkv8-28A0A0G2JE47 121 aa13.23□□□□□ -0.29
Cdx1-201ENSMUST00000025521 Gm11011D3Z3L9 86 aa13.23□□□□□ -0.29
Cdx1-201ENSMUST00000025521 Defa4P28311 92 aa13.23□□□□□ -0.29
Cdx1-201ENSMUST00000025521 Fam19a1Q7TPG8 133 aa13.23□□□□□ -0.29
Cdx1-201ENSMUST00000025521 Huwe1Q7TMY8 4377 aaKnown RBP13.23□□□□□ -0.29
Cdx1-201ENSMUST00000025521 Tenm2Q9WTS5 2764 aa13.23□□□□□ -0.29
Cdx1-201ENSMUST00000025521 Igkv3-2A0A075B5P0 119 aa13.22□□□□□ -0.29
Cdx1-201ENSMUST00000025521 Defb40Q70KL2 73 aa13.22□□□□□ -0.29
Cdx1-201ENSMUST00000025521 4930535I16RikQ9CUI2 172 aa13.22□□□□□ -0.29
Cdx1-201ENSMUST00000025521 Fam19a5Q91WE9 132 aa13.21□□□□□ -0.29
Cdx1-201ENSMUST00000025521 Sfta2E9PXB6 77 aa13.2□□□□□ -0.3
Cdx1-201ENSMUST00000025521 A830005F24RikQ8BRT5 167 aa13.2□□□□□ -0.3
Cdx1-201ENSMUST00000025521 Megf8P60882 2789 aa13.19□□□□□ -0.3
Cdx1-201ENSMUST00000025521 Fam104aA2A6P4 185 aa13.18□□□□□ -0.3
Cdx1-201ENSMUST00000025521 Sprr2jO70561 109 aa13.18□□□□□ -0.3
Cdx1-201ENSMUST00000025521 Zcchc13Q9D548 170 aa13.18□□□□□ -0.3
Cdx1-201ENSMUST00000025521 U90926O08546 118 aa13.17□□□□□ -0.3
Cdx1-201ENSMUST00000025521 TgO08710 2766 aa13.17□□□□□ -0.3
Cdx1-201ENSMUST00000025521 Stab2Q8R4U0 2559 aa13.16□□□□□ -0.3
Cdx1-201ENSMUST00000025521 Gm9508A0A1W2P7W0 230 aa13.16□□□□□ -0.3
Cdx1-201ENSMUST00000025521 Apoc4Q61268 124 aa13.16□□□□□ -0.3
Cdx1-201ENSMUST00000025521 Cystm1Q8K353 104 aa13.16□□□□□ -0.3
Cdx1-201ENSMUST00000025521 7530416G11RikJ3QJX6 159 aa13.15□□□□□ -0.3
Cdx1-201ENSMUST00000025521 SycnQ8VCK7 134 aa13.15□□□□□ -0.3
Cdx1-201ENSMUST00000025521 MplkipQ9D011 178 aa13.15□□□□□ -0.3
Cdx1-201ENSMUST00000025521 Muc6Q80T03 2850 aa13.15□□□□□ -0.3
Cdx1-201ENSMUST00000025521 Defa25Q5G864 92 aa13.15□□□□□ -0.31
Cdx1-201ENSMUST00000025521 Gm28539A0A087WSL9 92 aa13.14□□□□□ -0.31
Cdx1-201ENSMUST00000025521 A0A286YE02 88 aa13.14□□□□□ -0.31
Cdx1-201ENSMUST00000025521 Cox6a2P43023 97 aa13.14□□□□□ -0.31
Cdx1-201ENSMUST00000025521 Gm10837Q3UTT8 145 aa13.12□□□□□ -0.31
Cdx1-201ENSMUST00000025521 Gm37389A0A0A6YW05 95 aa13.11□□□□□ -0.31
Cdx1-201ENSMUST00000025521 Vpreb1P13372 142 aa13.11□□□□□ -0.31
Cdx1-201ENSMUST00000025521 Vpreb3D3Z6J4 130 aa13.1□□□□□ -0.31
Cdx1-201ENSMUST00000025521 P06320 134 aa13.1□□□□□ -0.31
Cdx1-201ENSMUST00000025521 PkigO70139 76 aa13.09□□□□□ -0.31
Cdx1-201ENSMUST00000025521 Serp2Q6TAW2 65 aa13.09□□□□□ -0.31
Cdx1-201ENSMUST00000025521 Gm17689B3GLJ4 109 aa13.07□□□□□ -0.32
Cdx1-201ENSMUST00000025521 Ndufc1Q9CQY9 76 aa13.07□□□□□ -0.32
Cdx1-201ENSMUST00000025521 Gm12353A2AGJ4 60 aa13.06□□□□□ -0.32
Cdx1-201ENSMUST00000025521 Gm10401E9Q3K6 71 aa13.06□□□□□ -0.32
Cdx1-201ENSMUST00000025521 Ube2bP63147 152 aa13.06□□□□□ -0.32
Cdx1-201ENSMUST00000025521 Igkv1-110A0A0B4J1I0 119 aa13.05□□□□□ -0.32
Cdx1-201ENSMUST00000025521 PscaP57096 123 aa13.05□□□□□ -0.32
Cdx1-201ENSMUST00000025521 Fras1Q80T14 4010 aa13.05□□□□□ -0.32
Cdx1-201ENSMUST00000025521 Nupr2Q497P3 102 aa13.04□□□□□ -0.32
Cdx1-201ENSMUST00000025521 SmcpP15265 143 aa13.04□□□□□ -0.32
Cdx1-201ENSMUST00000025521 Gm17521F6QAC8 156 aa13.02□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 154.6 ms