RNA–Protein interactions for RNA: ENSMUST00000021761.12

Trim27-201, Transcript of Zinc finger protein RFP, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim27, Length 4,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-201ENSMUST00000021761 Gm19935A0A1B0GSF9 52 aa9.58□□□□□ -0.88
Trim27-201ENSMUST00000021761 Q9DAA7 145 aa9.58□□□□□ -0.88
Trim27-201ENSMUST00000021761 Igkv8-27A0A0G2JF28 120 aa9.58□□□□□ -0.88
Trim27-201ENSMUST00000021761 Igkv8-30A0A140T8M3 121 aa9.58□□□□□ -0.88
Trim27-201ENSMUST00000021761 Col6a5A6H584 2640 aa9.58□□□□□ -0.88
Trim27-201ENSMUST00000021761 Krtap24-1G3X9A2 248 aa9.58□□□□□ -0.88
Trim27-201ENSMUST00000021761 Gm12353A2AGJ4 60 aa9.57□□□□□ -0.88
Trim27-201ENSMUST00000021761 7530416G11RikJ3QJX6 159 aa9.57□□□□□ -0.88
Trim27-201ENSMUST00000021761 LrbaQ9ESE1 2856 aa9.57□□□□□ -0.88
Trim27-201ENSMUST00000021761 PscaP57096 123 aa9.56□□□□□ -0.88
Trim27-201ENSMUST00000021761 Tcl1b5P56845 121 aa9.55□□□□□ -0.88
Trim27-201ENSMUST00000021761 Gm16485Q8C4B7 115 aa9.54□□□□□ -0.88
Trim27-201ENSMUST00000021761 Gm43218A0A0G2JGT0 114 aa9.54□□□□□ -0.88
Trim27-201ENSMUST00000021761 Gm17509Q9CZ61 145 aa9.54□□□□□ -0.88
Trim27-201ENSMUST00000021761 Defb50Q6TU36 73 aa9.53□□□□□ -0.88
Trim27-201ENSMUST00000021761 Ighv8-13A0A075B5Y0 101 aa9.52□□□□□ -0.88
Trim27-201ENSMUST00000021761 Hivep1Q03172 2688 aa9.52□□□□□ -0.89
Trim27-201ENSMUST00000021761 Zfhx4Q9JJN2 3550 aa9.52□□□□□ -0.89
Trim27-201ENSMUST00000021761 Vps13cQ8BX70 3748 aa9.52□□□□□ -0.89
Trim27-201ENSMUST00000021761 Ntn5Q3UQ22 452 aa9.52□□□□□ -0.89
Trim27-201ENSMUST00000021761 Smg1Q8BKX6 3658 aaKnown RBP9.51□□□□□ -0.89
Trim27-201ENSMUST00000021761 Sprr2jO70561 109 aa9.51□□□□□ -0.89
Trim27-201ENSMUST00000021761 SycnQ8VCK7 134 aa9.51□□□□□ -0.89
Trim27-201ENSMUST00000021761 Gm9903Q8C9Y8 129 aa9.51□□□□□ -0.89
Trim27-201ENSMUST00000021761 Gm17689B3GLJ4 109 aa9.51□□□□□ -0.89
Trim27-201ENSMUST00000021761 Gm26661M0QWV4 156 aa9.51□□□□□ -0.89
Trim27-201ENSMUST00000021761 Pkd1l1Q8R526 2615 aa9.5□□□□□ -0.89
Trim27-201ENSMUST00000021761 Csdc2Q91YQ3 154 aa9.5□□□□□ -0.89
Trim27-201ENSMUST00000021761 Gm10267M0QWD8 85 aa9.49□□□□□ -0.89
Trim27-201ENSMUST00000021761 P01819 144 aa9.49□□□□□ -0.89
Trim27-201ENSMUST00000021761 Atox1O08997 68 aaKnown RBP9.48□□□□□ -0.89
Trim27-201ENSMUST00000021761 4930519P11RikQ9CUJ8 166 aa9.48□□□□□ -0.89
Trim27-201ENSMUST00000021761 6430550D23RikE9Q1X6 194 aa9.48□□□□□ -0.89
Trim27-201ENSMUST00000021761 Igkv8-21A0A140T8P7 120 aa9.47□□□□□ -0.89
Trim27-201ENSMUST00000021761 1810062G17RikG3X8Y2 129 aa9.46□□□□□ -0.89
Trim27-201ENSMUST00000021761 Wfdc10Q3V2J9 124 aa9.46□□□□□ -0.89
Trim27-201ENSMUST00000021761 2310034G01RikA0A286YDL3 209 aa9.46□□□□□ -0.89
Trim27-201ENSMUST00000021761 Krtap11-1E9Q2E9 183 aa9.45□□□□□ -0.9
Trim27-201ENSMUST00000021761 U90926O08546 118 aa9.45□□□□□ -0.9
Trim27-201ENSMUST00000021761 1700074P13RikQ9D9G7 251 aa9.45□□□□□ -0.9
Trim27-201ENSMUST00000021761 Serp1Q9Z1W5 66 aa9.45□□□□□ -0.9
Trim27-201ENSMUST00000021761 A0A286YE49 62 aa9.45□□□□□ -0.9
Trim27-201ENSMUST00000021761 Gm10570F6VB42 170 aa9.45□□□□□ -0.9
Trim27-201ENSMUST00000021761 Krtap16-1A2A5X5 502 aa9.43□□□□□ -0.9
Trim27-201ENSMUST00000021761 Gm10770F7D043 238 aa9.43□□□□□ -0.9
Trim27-201ENSMUST00000021761 Reg3aO09037 175 aa9.43□□□□□ -0.9
Trim27-201ENSMUST00000021761 Nupr2Q497P3 102 aa9.43□□□□□ -0.9
Trim27-201ENSMUST00000021761 SptssbQ925E8 76 aa9.42□□□□□ -0.9
Trim27-201ENSMUST00000021761 9230102O04RikA2ASX7 82 aa9.42□□□□□ -0.9
Trim27-201ENSMUST00000021761 Snhg11Q4G0K9 87 aa9.42□□□□□ -0.9
Trim27-201ENSMUST00000021761 Defb13Q8R2I4 64 aa9.41□□□□□ -0.9
Trim27-201ENSMUST00000021761 C530025M09RikF6RGA8 229 aa9.41□□□□□ -0.9
Trim27-201ENSMUST00000021761 Cox6a2P43023 97 aa9.4□□□□□ -0.9
Trim27-201ENSMUST00000021761 Igkv3-4A0A140T8Q4 119 aa9.4□□□□□ -0.91
Trim27-201ENSMUST00000021761 Helz2E9QAM5 2947 aaKnown RBP9.39□□□□□ -0.91
Trim27-201ENSMUST00000021761 Gm44790A0A0N4SV91 103 aa9.39□□□□□ -0.91
Trim27-201ENSMUST00000021761 1700018G05RikA0A1B0GSI2 66 aa9.39□□□□□ -0.91
Trim27-201ENSMUST00000021761 Mrpl34Q99N91 92 aa9.39□□□□□ -0.91
Trim27-201ENSMUST00000021761 UqcrqQ9CQ69 82 aa9.39□□□□□ -0.91
Trim27-201ENSMUST00000021761 Gm10337F7DEP7 55 aa9.38□□□□□ -0.91
Trim27-201ENSMUST00000021761 Igsf10Q3V1M1 2594 aa9.38□□□□□ -0.91
Trim27-201ENSMUST00000021761 Ighv2-5A0A0A6YY69 116 aa9.37□□□□□ -0.91
Trim27-201ENSMUST00000021761 C130032M10RikQ8C888 123 aa9.37□□□□□ -0.91
Trim27-201ENSMUST00000021761 H2al1bA0A087WP11 105 aa9.37□□□□□ -0.91
Trim27-201ENSMUST00000021761 Elof1P60003 83 aa9.37□□□□□ -0.91
Trim27-201ENSMUST00000021761 E130208F15RikQ3UPV3 143 aa9.37□□□□□ -0.91
Trim27-201ENSMUST00000021761 Gm10308Q9CVR5 141 aa9.37□□□□□ -0.91
Trim27-201ENSMUST00000021761 Fam229bQ8CF36 80 aa9.36□□□□□ -0.91
Trim27-201ENSMUST00000021761 Muc5acE9QAQ8 3455 aa9.36□□□□□ -0.91
Trim27-201ENSMUST00000021761 Gm5617Q91VN2 117 aa9.36□□□□□ -0.91
Trim27-201ENSMUST00000021761 A530084C06RikQ3UTW2 186 aa9.36□□□□□ -0.91
Trim27-201ENSMUST00000021761 Coa6Q8BGD8 79 aa9.36□□□□□ -0.91
Trim27-201ENSMUST00000021761 Zfhx3Q61329 3726 aa9.35□□□□□ -0.91
Trim27-201ENSMUST00000021761 Igkv3-3A0A140T8Q0 119 aa9.35□□□□□ -0.91
Trim27-201ENSMUST00000021761 Gm10197F6QEY5 67 aa9.35□□□□□ -0.91
Trim27-201ENSMUST00000021761 Pou2af1Q64693 256 aa9.35□□□□□ -0.91
Trim27-201ENSMUST00000021761 AY074887Q8R5F9 132 aa9.35□□□□□ -0.91
Trim27-201ENSMUST00000021761 Gm28230A0A0A0MQ91 144 aa9.34□□□□□ -0.91
Trim27-201ENSMUST00000021761 Igkv3-12A0A140T8P0 119 aa9.34□□□□□ -0.91
Trim27-201ENSMUST00000021761 Gm21886J3QJU9 214 aa9.34□□□□□ -0.91
Trim27-201ENSMUST00000021761 Ndufs5Q99LY9 106 aa9.33□□□□□ -0.92
Trim27-201ENSMUST00000021761 Fam168bQ80XQ8 194 aa9.33□□□□□ -0.92
Trim27-201ENSMUST00000021761 Stab2Q8R4U0 2559 aa9.33□□□□□ -0.92
Trim27-201ENSMUST00000021761 Igkv8-28A0A0G2JE47 121 aa9.32□□□□□ -0.92
Trim27-201ENSMUST00000021761 Rps28P62858 69 aaKnown RBP9.32□□□□□ -0.92
Trim27-201ENSMUST00000021761 Wfdc3Q14AE4 130 aa9.3□□□□□ -0.92
Trim27-201ENSMUST00000021761 A330070K13RikQ8CA53 115 aa9.3□□□□□ -0.92
Trim27-201ENSMUST00000021761 Sprr1bQ62267 153 aa9.29□□□□□ -0.92
Trim27-201ENSMUST00000021761 Igkv3-7A0A0G2JE31 119 aa9.28□□□□□ -0.92
Trim27-201ENSMUST00000021761 Ighv2-2A0A075B5P8 116 aa9.28□□□□□ -0.92
Trim27-201ENSMUST00000021761 P01821 116 aa9.28□□□□□ -0.92
Trim27-201ENSMUST00000021761 Gm7138L7N2C3 230 aa9.27□□□□□ -0.92
Trim27-201ENSMUST00000021761 Gm3238W4VSP7 230 aa9.27□□□□□ -0.92
Trim27-201ENSMUST00000021761 Gm16181B0V2H2 73 aa9.27□□□□□ -0.93
Trim27-201ENSMUST00000021761 Gm10320E9PW43 113 aa9.27□□□□□ -0.93
Trim27-201ENSMUST00000021761 H2al1aQ5M8Q2 105 aa9.27□□□□□ -0.93
Trim27-201ENSMUST00000021761 H2al1eQ810S6 105 aa9.27□□□□□ -0.93
Trim27-201ENSMUST00000021761 Sprr4Q8CGN8 76 aa9.27□□□□□ -0.93
Trim27-201ENSMUST00000021761 Dmac1Q9CQ00 111 aa9.27□□□□□ -0.93
Trim27-201ENSMUST00000021761 Cystm1Q8K353 104 aa9.26□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 7.6 ms