RNA–Protein interactions for RNA: ENSMUST00000004097.15

Cux1-201, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Cux1, Length 12,862 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-201ENSMUST00000004097 P0C913 63 aa5.66□□□□□ -1.5
Cux1-201ENSMUST00000004097 Dmac1Q9CQ00 111 aa5.65□□□□□ -1.5
Cux1-201ENSMUST00000004097 SnurfQ9WU12 71 aa5.65□□□□□ -1.51
Cux1-201ENSMUST00000004097 E130208F15RikQ3UPV3 143 aa5.64□□□□□ -1.51
Cux1-201ENSMUST00000004097 Cep350E9Q309 3095 aa5.64□□□□□ -1.51
Cux1-201ENSMUST00000004097 4930432M17RikQ3V0W9 174 aa5.64□□□□□ -1.51
Cux1-201ENSMUST00000004097 Abca12E9Q876 2595 aa5.64□□□□□ -1.51
Cux1-201ENSMUST00000004097 Gm42715A0A087WP63 3095 aaKnown RBP5.63□□□□□ -1.51
Cux1-201ENSMUST00000004097 Ighv2-2A0A075B5P8 116 aa5.63□□□□□ -1.51
Cux1-201ENSMUST00000004097 P01821 116 aa5.63□□□□□ -1.51
Cux1-201ENSMUST00000004097 4930524J08RikQ9CUJ5 163 aa5.62□□□□□ -1.51
Cux1-201ENSMUST00000004097 Gm44790A0A0N4SV91 103 aa5.62□□□□□ -1.51
Cux1-201ENSMUST00000004097 MobpQ9D2P8 170 aa5.62□□□□□ -1.51
Cux1-201ENSMUST00000004097 Gm11627A6PWP4 55 aa5.6□□□□□ -1.51
Cux1-201ENSMUST00000004097 Col27a1Q5QNQ9 1845 aa5.6□□□□□ -1.51
Cux1-201ENSMUST00000004097 Spink13Q3UTS8 97 aa5.6□□□□□ -1.51
Cux1-201ENSMUST00000004097 Prr9Q8BV84 116 aa5.6□□□□□ -1.51
Cux1-201ENSMUST00000004097 Gm10845Q3UNY9 185 aa5.6□□□□□ -1.51
Cux1-201ENSMUST00000004097 Notch1Q01705 2531 aa5.59□□□□□ -1.51
Cux1-201ENSMUST00000004097 Gm7137J3QMW1 236 aa5.59□□□□□ -1.51
Cux1-201ENSMUST00000004097 Gm5468Q8C3D3 155 aa5.59□□□□□ -1.51
Cux1-201ENSMUST00000004097 Usp34Q6ZQ93 3582 aa5.59□□□□□ -1.51
Cux1-201ENSMUST00000004097 Bahcc1Q3UHR0 2643 aa5.59□□□□□ -1.52
Cux1-201ENSMUST00000004097 FlnbQ80X90 2602 aaKnown RBP5.58□□□□□ -1.52
Cux1-201ENSMUST00000004097 Hectd1Q69ZR2 2618 aaKnown RBP5.58□□□□□ -1.52
Cux1-201ENSMUST00000004097 Chtf8P0CG14 533 aa5.58□□□□□ -1.52
Cux1-201ENSMUST00000004097 Ankrd17Q99NH0 2603 aaKnown RBP5.57□□□□□ -1.52
Cux1-201ENSMUST00000004097 Map1aQ9QYR6 2776 aa5.56□□□□□ -1.52
Cux1-201ENSMUST00000004097 Znf580Q9DB38 172 aa5.56□□□□□ -1.52
Cux1-201ENSMUST00000004097 Krtap15-1Q9QZU5 150 aa5.55□□□□□ -1.52
Cux1-201ENSMUST00000004097 Krtap27-1E9PX37 202 aa5.55□□□□□ -1.52
Cux1-201ENSMUST00000004097 Cdc42se1Q8BHL7 80 aa5.54□□□□□ -1.52
Cux1-201ENSMUST00000004097 Defb9Q8R2I6 67 aa5.54□□□□□ -1.52
Cux1-201ENSMUST00000004097 Smim1P0C8K7 78 aa5.54□□□□□ -1.52
Cux1-201ENSMUST00000004097 Gm7138L7N2C3 230 aa5.54□□□□□ -1.52
Cux1-201ENSMUST00000004097 Gm3238W4VSP7 230 aa5.54□□□□□ -1.52
Cux1-201ENSMUST00000004097 PcntP48725 2898 aa5.54□□□□□ -1.52
Cux1-201ENSMUST00000004097 TrioQ0KL02 3102 aa5.54□□□□□ -1.52
Cux1-201ENSMUST00000004097 Prrc2cQ3TLH4 2846 aaKnown RBP5.53□□□□□ -1.52
Cux1-201ENSMUST00000004097 Q8BT88 171 aa5.53□□□□□ -1.52
Cux1-201ENSMUST00000004097 CriptO70333 101 aa5.53□□□□□ -1.52
Cux1-201ENSMUST00000004097 Mast4Q811L6 2618 aa5.52□□□□□ -1.53
Cux1-201ENSMUST00000004097 Dnah12Q3V0Q1 3086 aa5.52□□□□□ -1.53
Cux1-201ENSMUST00000004097 Cdh23Q99PF4 3354 aa5.51□□□□□ -1.53
Cux1-201ENSMUST00000004097 AW011738F6S7Q2 159 aa5.51□□□□□ -1.53
Cux1-201ENSMUST00000004097 Stab1Q8R4Y4 2571 aa5.51□□□□□ -1.53
Cux1-201ENSMUST00000004097 Fam229aB2KGE5 128 aa5.5□□□□□ -1.53
Cux1-201ENSMUST00000004097 Gm10770F7D043 238 aa5.5□□□□□ -1.53
Cux1-201ENSMUST00000004097 Coa6Q8BGD8 79 aa5.48□□□□□ -1.53
Cux1-201ENSMUST00000004097 Gm10197F6QEY5 67 aa5.48□□□□□ -1.53
Cux1-201ENSMUST00000004097 Elof1P60003 83 aa5.48□□□□□ -1.53
Cux1-201ENSMUST00000004097 Gm10135F6TEE5 83 aa5.47□□□□□ -1.53
Cux1-201ENSMUST00000004097 AtrQ9JKK8 2635 aa5.47□□□□□ -1.53
Cux1-201ENSMUST00000004097 Gm10337F7DEP7 55 aa5.46□□□□□ -1.53
Cux1-201ENSMUST00000004097 Gm26620Q9CY65 116 aa5.46□□□□□ -1.53
Cux1-201ENSMUST00000004097 Gm19935A0A1B0GSF9 52 aa5.46□□□□□ -1.54
Cux1-201ENSMUST00000004097 Camk2n1Q6QWF9 78 aa5.46□□□□□ -1.54
Cux1-201ENSMUST00000004097 Prune2Q52KR3 3084 aa5.45□□□□□ -1.54
Cux1-201ENSMUST00000004097 Krtap11-1E9Q2E9 183 aa5.45□□□□□ -1.54
Cux1-201ENSMUST00000004097 AI854703Q8BIN3 203 aa5.44□□□□□ -1.54
Cux1-201ENSMUST00000004097 A330070K13RikQ8CA53 115 aa5.44□□□□□ -1.54
Cux1-201ENSMUST00000004097 Cypt15B1AXS0 87 aa5.43□□□□□ -1.54
Cux1-201ENSMUST00000004097 Unc80Q8BLN6 3261 aa5.42□□□□□ -1.54
Cux1-201ENSMUST00000004097 Chd6A3KFM7 2711 aa5.41□□□□□ -1.54
Cux1-201ENSMUST00000004097 Lama2Q60675 3118 aaKnown RBP5.4□□□□□ -1.54
Cux1-201ENSMUST00000004097 Nsd1O88491 2588 aaKnown RBP5.39□□□□□ -1.55
Cux1-201ENSMUST00000004097 Gm9573F7C950 1606 aa5.39□□□□□ -1.55
Cux1-201ENSMUST00000004097 CnfnQ6PCW6 111 aa5.37□□□□□ -1.55
Cux1-201ENSMUST00000004097 Gm10320E9PW43 113 aa5.37□□□□□ -1.55
Cux1-201ENSMUST00000004097 4930518I15RikQ3V2W7 57 aa5.37□□□□□ -1.55
Cux1-201ENSMUST00000004097 Gcn1E9PVA8 2671 aaKnown RBP5.36□□□□□ -1.55
Cux1-201ENSMUST00000004097 9530053A07RikE9PVG8 2581 aa5.36□□□□□ -1.55
Cux1-201ENSMUST00000004097 Gm9508A0A1W2P7W0 230 aa5.36□□□□□ -1.55
Cux1-201ENSMUST00000004097 Tep1P97499 2629 aa5.36□□□□□ -1.55
Cux1-201ENSMUST00000004097 Rps28P62858 69 aaKnown RBP5.36□□□□□ -1.55
Cux1-201ENSMUST00000004097 Gm3880A0A1B0GSB3 72 aa5.35□□□□□ -1.55
Cux1-201ENSMUST00000004097 Mki67E9PVX6 3177 aaKnown RBP5.35□□□□□ -1.55
Cux1-201ENSMUST00000004097 Cfap54Q8C6S9 3106 aa5.34□□□□□ -1.55
Cux1-201ENSMUST00000004097 2310034C09RikQ9D746 214 aa5.33□□□□□ -1.56
Cux1-201ENSMUST00000004097 Bod1lE9Q6J5 3032 aa5.32□□□□□ -1.56
Cux1-201ENSMUST00000004097 Krtap26-1Q9D7N2 215 aa5.32□□□□□ -1.56
Cux1-201ENSMUST00000004097 CenpfE9Q3P4 2997 aaKnown RBP5.32□□□□□ -1.56
Cux1-201ENSMUST00000004097 Sprr4Q8CGN8 76 aa5.32□□□□□ -1.56
Cux1-201ENSMUST00000004097 Gm10772F7AIG4 85 aa5.31□□□□□ -1.56
Cux1-201ENSMUST00000004097 Sec61bQ9CQS8 96 aaKnown RBP5.31□□□□□ -1.56
Cux1-201ENSMUST00000004097 Gm4491E0CX42 125 aa5.3□□□□□ -1.56
Cux1-201ENSMUST00000004097 A530084C06RikQ3UTW2 186 aa5.3□□□□□ -1.56
Cux1-201ENSMUST00000004097 Ypel4Q65Z93 127 aa5.3□□□□□ -1.56
Cux1-201ENSMUST00000004097 Psors1c2Q80ZC9 134 aa5.3□□□□□ -1.56
Cux1-201ENSMUST00000004097 Coa5Q99M07 74 aa5.29□□□□□ -1.56
Cux1-201ENSMUST00000004097 Szt2A2A9C3 3431 aa5.29□□□□□ -1.56
Cux1-201ENSMUST00000004097 Lypd5Q9D7Z7 256 aa5.28□□□□□ -1.56
Cux1-201ENSMUST00000004097 Itpr3P70227 2670 aa5.28□□□□□ -1.56
Cux1-201ENSMUST00000004097 Fam104aA2A6P4 185 aa5.28□□□□□ -1.56
Cux1-201ENSMUST00000004097 Gm17349F7BGH6 99 aa5.28□□□□□ -1.56
Cux1-201ENSMUST00000004097 Gm21798J3QNU5 87 aa5.28□□□□□ -1.56
Cux1-201ENSMUST00000004097 Uqcr11Q9CPX8 56 aa5.27□□□□□ -1.57
Cux1-201ENSMUST00000004097 3110070M22RikQ9DAQ7 118 aa5.27□□□□□ -1.57
Cux1-201ENSMUST00000004097 Zfp292Q9Z2U2 2698 aa5.26□□□□□ -1.57
Cux1-201ENSMUST00000004097 Gm19426M0QWC7 77 aa5.26□□□□□ -1.57
Retrieved 100 of 22,080 RNA–protein pairs in 92.4 ms