RNA–Protein interactions for RNA: ENSMUST00000004097.15

Cux1-201, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Cux1, Length 12,862 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-201ENSMUST00000004097 Rhox8Q6VSS7 320 aa14.71□□□□□ -0.05
Cux1-201ENSMUST00000004097 Ube2uB1AUC4 352 aa13.56□□□□□ -0.24
Cux1-201ENSMUST00000004097 Zeb1Q64318 1117 aa13.35□□□□□ -0.27
Cux1-201ENSMUST00000004097 Esf1Q3V1V3 845 aaKnown RBP13.28□□□□□ -0.28
Cux1-201ENSMUST00000004097 Ehmt2Q9Z148 1263 aaKnown RBP13.28□□□□□ -0.28
Cux1-201ENSMUST00000004097 Cngb1E1AZ71 1325 aa13.14□□□□□ -0.31
Cux1-201ENSMUST00000004097 Wdr66E9Q743 1299 aa12.99□□□□□ -0.33
Cux1-201ENSMUST00000004097 Npm2Q80W85 207 aa12.98□□□□□ -0.33
Cux1-201ENSMUST00000004097 Ccdc136Q3TVA9 1136 aa12.91□□□□□ -0.34
Cux1-201ENSMUST00000004097 Myt1lP97500 1187 aa12.87□□□□□ -0.35
Cux1-201ENSMUST00000004097 Gab3Q8BSM5 595 aa12.84□□□□□ -0.35
Cux1-201ENSMUST00000004097 Las1lA2BE28 776 aaKnown RBP12.78□□□□□ -0.36
Cux1-201ENSMUST00000004097 Pelp1Q9DBD5 1123 aaKnown RBP12.75□□□□□ -0.37
Cux1-201ENSMUST00000004097 Amer1Q7TS75 1132 aa12.64□□□□□ -0.39
Cux1-201ENSMUST00000004097 Slc24a1Q91WD8 1130 aa12.64□□□□□ -0.39
Cux1-201ENSMUST00000004097 Plppr3Q7TPB0 716 aa12.63□□□□□ -0.39
Cux1-201ENSMUST00000004097 Rpgrip1Q9EPQ2 1331 aa12.61□□□□□ -0.39
Cux1-201ENSMUST00000004097 Os9Q8K2C7 672 aa12.51□□□□□ -0.41
Cux1-201ENSMUST00000004097 Il27Q8K3I6 234 aa12.5□□□□□ -0.41
Cux1-201ENSMUST00000004097 HrcG5E8J6 738 aa12.45□□□□□ -0.42
Cux1-201ENSMUST00000004097 Ifnlr1Q8CGK5 535 aa12.43□□□□□ -0.42
Cux1-201ENSMUST00000004097 Chic1Q8CBW7 227 aa12.42□□□□□ -0.42
Cux1-201ENSMUST00000004097 Gm13697A2AK42 830 aa12.38□□□□□ -0.43
Cux1-201ENSMUST00000004097 Neurod1Q60867 357 aa12.34□□□□□ -0.43
Cux1-201ENSMUST00000004097 Zbtb7cQ8VCZ7 619 aa12.33□□□□□ -0.44
Cux1-201ENSMUST00000004097 UbtfP25976 765 aaKnown RBP12.27□□□□□ -0.45
Cux1-201ENSMUST00000004097 Ap3b1Q9Z1T1 1105 aa12.21□□□□□ -0.45
Cux1-201ENSMUST00000004097 Ttbk1Q6PCN3 1308 aa12.2□□□□□ -0.46
Cux1-201ENSMUST00000004097 Trim41Q5NCC3 630 aa12.19□□□□□ -0.46
Cux1-201ENSMUST00000004097 Atp1b4Q99ME6 356 aa12.15□□□□□ -0.46
Cux1-201ENSMUST00000004097 4930567H17RikQ3V0K5 233 aa12.13□□□□□ -0.47
Cux1-201ENSMUST00000004097 Gm13695A2AK44 830 aa12.1□□□□□ -0.47
Cux1-201ENSMUST00000004097 DiexfQ8BTT6 772 aaKnown RBP12.08□□□□□ -0.48
Cux1-201ENSMUST00000004097 Fam50aQ9WV03 339 aaKnown RBP12.07□□□□□ -0.48
Cux1-201ENSMUST00000004097 Hnrnpul2Q00PI9 745 aaKnown RBP12.05□□□□□ -0.48
Cux1-201ENSMUST00000004097 Prdm10Q3UTQ7 1184 aa12.02□□□□□ -0.49
Cux1-201ENSMUST00000004097 Eif5bQ05D44 1216 aaKnown RBP12.01□□□□□ -0.49
Cux1-201ENSMUST00000004097 Zbtb4Q5F293 982 aa11.98□□□□□ -0.49
Cux1-201ENSMUST00000004097 Anp32bQ9EST5 272 aaKnown RBP11.94□□□□□ -0.5
Cux1-201ENSMUST00000004097 Erich6D3Z6S9 713 aa11.93□□□□□ -0.5
Cux1-201ENSMUST00000004097 4933416C03RikQ3V063 378 aa11.9□□□□□ -0.5
Cux1-201ENSMUST00000004097 NrdcQ8BHG1 1161 aa11.89□□□□□ -0.51
Cux1-201ENSMUST00000004097 NeflP08551 543 aa11.89□□□□□ -0.51
Cux1-201ENSMUST00000004097 Gm35339A0A140LHH9 1649 aa11.86□□□□□ -0.51
Cux1-201ENSMUST00000004097 Stra8P70278 393 aa11.84□□□□□ -0.51
Cux1-201ENSMUST00000004097 NclP09405 707 aaKnown RBP11.84□□□□□ -0.51
Cux1-201ENSMUST00000004097 Fkbp15Q6P9Q6 1216 aaKnown RBP11.83□□□□□ -0.52
Cux1-201ENSMUST00000004097 Safb2Q80YR5 991 aaKnown RBP11.83□□□□□ -0.52
Cux1-201ENSMUST00000004097 Cdk11bP24788 784 aaKnown RBP11.8□□□□□ -0.52
Cux1-201ENSMUST00000004097 Ppargc1bQ8VHJ7 1014 aa11.8□□□□□ -0.52
Cux1-201ENSMUST00000004097 Rangap1P46061 589 aaKnown RBP11.78□□□□□ -0.52
Cux1-201ENSMUST00000004097 Polr3glQ8R0C0 218 aa11.77□□□□□ -0.53
Cux1-201ENSMUST00000004097 Acin1Q9JIX8 1338 aaKnown RBP11.74□□□□□ -0.53
Cux1-201ENSMUST00000004097 Lmod2Q3UHZ5 550 aa11.71□□□□□ -0.53
Cux1-201ENSMUST00000004097 Hdac5Q9Z2V6 1113 aa11.68□□□□□ -0.54
Cux1-201ENSMUST00000004097 CenpbP27790 599 aa11.63□□□□□ -0.55
Cux1-201ENSMUST00000004097 ArxO35085 564 aa11.63□□□□□ -0.55
Cux1-201ENSMUST00000004097 Npm1Q61937 292 aaKnown RBP11.63□□□□□ -0.55
Cux1-201ENSMUST00000004097 P3h3Q8CG70 732 aa11.62□□□□□ -0.55
Cux1-201ENSMUST00000004097 MyclP10166 368 aa11.62□□□□□ -0.55
Cux1-201ENSMUST00000004097 Nlrp6Q91WS2 869 aa11.62□□□□□ -0.55
Cux1-201ENSMUST00000004097 Abcc9P70170 1546 aa11.59□□□□□ -0.55
Cux1-201ENSMUST00000004097 Irx6Q9ER75 438 aa11.58□□□□□ -0.56
Cux1-201ENSMUST00000004097 Ythdc1E9Q5K9 736 aaKnown RBP11.56□□□□□ -0.56
Cux1-201ENSMUST00000004097 Znf326O88291 580 aa11.52□□□□□ -0.57
Cux1-201ENSMUST00000004097 Rtn4Q99P72 1162 aaKnown RBP11.49□□□□□ -0.57
Cux1-201ENSMUST00000004097 Clstn1Q9EPL2 979 aa11.48□□□□□ -0.57
Cux1-201ENSMUST00000004097 NefmP08553 848 aa11.47□□□□□ -0.57
Cux1-201ENSMUST00000004097 Ggt6Q6PDE7 497 aa11.45□□□□□ -0.58
Cux1-201ENSMUST00000004097 Ubap1lG3UW59 384 aa11.42□□□□□ -0.58
Cux1-201ENSMUST00000004097 CatipB9EKE5 520 aa11.39□□□□□ -0.59
Cux1-201ENSMUST00000004097 Zcchc6Q5BLK4 1491 aaKnown RBP11.38□□□□□ -0.59
Cux1-201ENSMUST00000004097 Hsp90aa1P07901 733 aaKnown RBP11.36□□□□□ -0.59
Cux1-201ENSMUST00000004097 Q8BT18 775 aa11.36□□□□□ -0.59
Cux1-201ENSMUST00000004097 Vsig10D3YX43 558 aa11.36□□□□□ -0.59
Cux1-201ENSMUST00000004097 Ecm2Q5FW85 670 aa11.35□□□□□ -0.59
Cux1-201ENSMUST00000004097 NgefQ8CHT1 710 aa11.35□□□□□ -0.59
Cux1-201ENSMUST00000004097 Ppm1fQ8CGA0 452 aa11.33□□□□□ -0.6
Cux1-201ENSMUST00000004097 Mapk8ip2Q9ERE9 830 aa11.32□□□□□ -0.6
Cux1-201ENSMUST00000004097 Plekhg3Q4VAC9 1341 aa11.29□□□□□ -0.6
Cux1-201ENSMUST00000004097 Csrnp3P59055 597 aa11.26□□□□□ -0.61
Cux1-201ENSMUST00000004097 Trim26Q99PN3 545 aa11.24□□□□□ -0.61
Cux1-201ENSMUST00000004097 Slc4a1apE9PX68 744 aa11.24□□□□□ -0.61
Cux1-201ENSMUST00000004097 DaxxO35613 739 aa11.23□□□□□ -0.61
Cux1-201ENSMUST00000004097 TonslQ6NZL6 1363 aa11.22□□□□□ -0.61
Cux1-201ENSMUST00000004097 Lmod3E9QA62 571 aa11.22□□□□□ -0.61
Cux1-201ENSMUST00000004097 Fgd1P52734 960 aa11.21□□□□□ -0.61
Cux1-201ENSMUST00000004097 NischQ80TM9 1593 aa11.21□□□□□ -0.61
Cux1-201ENSMUST00000004097 MlecQ6ZQI3 291 aaKnown RBP11.2□□□□□ -0.62
Cux1-201ENSMUST00000004097 Ubl4bQ9CQ84 188 aa11.19□□□□□ -0.62
Cux1-201ENSMUST00000004097 Nop58Q6DFW4 536 aaKnown RBP11.19□□□□□ -0.62
Cux1-201ENSMUST00000004097 Prm3Q62100 101 aa11.18□□□□□ -0.62
Cux1-201ENSMUST00000004097 Aplp2Q06335 707 aa11.17□□□□□ -0.62
Cux1-201ENSMUST00000004097 Rad21Q61550 635 aaKnown RBP11.14□□□□□ -0.63
Cux1-201ENSMUST00000004097 Tnnt3Q9QZ47 272 aa11.11□□□□□ -0.63
Cux1-201ENSMUST00000004097 Ppp1r18Q8BQ30 594 aa11.1□□□□□ -0.63
Cux1-201ENSMUST00000004097 Myt1Q8CFC2 1127 aa11.08□□□□□ -0.64
Cux1-201ENSMUST00000004097 Chrna2Q91X60 512 aa11.07□□□□□ -0.64
Cux1-201ENSMUST00000004097 Upf2A2AT37 1269 aaKnown RBP11.07□□□□□ -0.64
Cux1-201ENSMUST00000004097 DekQ7TNV0 380 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms