RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Ube2d3P61079 147 aa10.9□□□□□ -0.66
Upf1-202ENSMUST00000215817 Ube2d2P62838 147 aa10.9□□□□□ -0.66
Upf1-202ENSMUST00000215817 Ormdl1Q921I0 153 aa10.9□□□□□ -0.66
Upf1-202ENSMUST00000215817 Cdip1Q9DB75 208 aa10.9□□□□□ -0.66
Upf1-202ENSMUST00000215817 Igkv4-79A0A075B5L8 119 aa10.89□□□□□ -0.67
Upf1-202ENSMUST00000215817 Gm10518F6UQQ9 182 aa10.89□□□□□ -0.67
Upf1-202ENSMUST00000215817 Tmem223Q9CQE2 199 aaKnown RBP10.89□□□□□ -0.67
Upf1-202ENSMUST00000215817 Cox7b2Q9D2H1 82 aa10.89□□□□□ -0.67
Upf1-202ENSMUST00000215817 Ube2bP63147 152 aa10.89□□□□□ -0.67
Upf1-202ENSMUST00000215817 B9d2Q3UK10 175 aa10.89□□□□□ -0.67
Upf1-202ENSMUST00000215817 Nupr2Q497P3 102 aa10.89□□□□□ -0.67
Upf1-202ENSMUST00000215817 Spink4O35679 86 aa10.88□□□□□ -0.67
Upf1-202ENSMUST00000215817 Rpl18aP62717 176 aaKnown RBP10.88□□□□□ -0.67
Upf1-202ENSMUST00000215817 Gm10735Q3US96 136 aa10.87□□□□□ -0.67
Upf1-202ENSMUST00000215817 Gm10322F7D7I4 111 aa10.87□□□□□ -0.67
Upf1-202ENSMUST00000215817 2010109I03RikQ9CQ11 111 aa10.87□□□□□ -0.67
Upf1-202ENSMUST00000215817 1700010B08RikQ9DAI7 102 aa10.87□□□□□ -0.67
Upf1-202ENSMUST00000215817 4930535I16RikQ9CUI2 172 aa10.87□□□□□ -0.67
Upf1-202ENSMUST00000215817 Igkv1-88A0A140T8N1 120 aa10.86□□□□□ -0.67
Upf1-202ENSMUST00000215817 Ighv8-11A0A075B5X4 119 aa10.86□□□□□ -0.67
Upf1-202ENSMUST00000215817 EnhoQ8K1D8 76 aa10.85□□□□□ -0.67
Upf1-202ENSMUST00000215817 A0A286YCN5 57 aa10.85□□□□□ -0.67
Upf1-202ENSMUST00000215817 Klk12B2RVZ0 247 aa10.85□□□□□ -0.67
Upf1-202ENSMUST00000215817 P06329 120 aa10.85□□□□□ -0.67
Upf1-202ENSMUST00000215817 Krtap27-1E9PX37 202 aa10.84□□□□□ -0.67
Upf1-202ENSMUST00000215817 Fam19a5Q91WE9 132 aa10.84□□□□□ -0.67
Upf1-202ENSMUST00000215817 Ly6hQ9WUC3 139 aa10.84□□□□□ -0.67
Upf1-202ENSMUST00000215817 4930432M17RikQ3V0W9 174 aa10.84□□□□□ -0.67
Upf1-202ENSMUST00000215817 Tenm3Q9WTS6 2715 aa10.83□□□□□ -0.68
Upf1-202ENSMUST00000215817 Trav14-1A0A0G2JF94 121 aa10.83□□□□□ -0.68
Upf1-202ENSMUST00000215817 Stab2Q8R4U0 2559 aa10.83□□□□□ -0.68
Upf1-202ENSMUST00000215817 Eif4ebp1Q60876 117 aa10.83□□□□□ -0.68
Upf1-202ENSMUST00000215817 Ufsp1Q9CZP0 217 aa10.82□□□□□ -0.68
Upf1-202ENSMUST00000215817 CnfnQ6PCW6 111 aa10.82□□□□□ -0.68
Upf1-202ENSMUST00000215817 Gm17472A0A075B683 117 aa10.82□□□□□ -0.68
Upf1-202ENSMUST00000215817 Csdc2Q91YQ3 154 aa10.82□□□□□ -0.68
Upf1-202ENSMUST00000215817 Igkv1-122A0A140T8M9 119 aa10.81□□□□□ -0.68
Upf1-202ENSMUST00000215817 SrarpQ3ULG3 163 aa10.81□□□□□ -0.68
Upf1-202ENSMUST00000215817 Ube2d1P61080 147 aaKnown RBP10.81□□□□□ -0.68
Upf1-202ENSMUST00000215817 BC048502Q80Y74 154 aa10.81□□□□□ -0.68
Upf1-202ENSMUST00000215817 Krtap26-1Q9D7N2 215 aa10.81□□□□□ -0.68
Upf1-202ENSMUST00000215817 Timm17bQ9Z0V7 172 aa10.81□□□□□ -0.68
Upf1-202ENSMUST00000215817 Gm36176A0A1W2P8D5 158 aa10.81□□□□□ -0.68
Upf1-202ENSMUST00000215817 Gm19935A0A1B0GSF9 52 aa10.79□□□□□ -0.68
Upf1-202ENSMUST00000215817 Crip2Q9DCT8 208 aaKnown RBP10.79□□□□□ -0.68
Upf1-202ENSMUST00000215817 5730596B20RikQ8BQ08 205 aa10.78□□□□□ -0.68
Upf1-202ENSMUST00000215817 FcgbpE9Q0B5 2583 aa10.78□□□□□ -0.68
Upf1-202ENSMUST00000215817 Cdc42se2Q8BGH7 84 aa10.77□□□□□ -0.69
Upf1-202ENSMUST00000215817 Psmb11Q8BG41 302 aa10.77□□□□□ -0.69
Upf1-202ENSMUST00000215817 Smg1Q8BKX6 3658 aaKnown RBP10.76□□□□□ -0.69
Upf1-202ENSMUST00000215817 Lypd5Q9D7Z7 256 aa10.76□□□□□ -0.69
Upf1-202ENSMUST00000215817 Rpl39lQ9CQD0 51 aa10.76□□□□□ -0.69
Upf1-202ENSMUST00000215817 Gpha2Q925Q5 128 aa10.76□□□□□ -0.69
Upf1-202ENSMUST00000215817 Apoc4Q61268 124 aa10.76□□□□□ -0.69
Upf1-202ENSMUST00000215817 NpwA0A1L1STR8 176 aa10.75□□□□□ -0.69
Upf1-202ENSMUST00000215817 Gm16181B0V2H2 73 aa10.75□□□□□ -0.69
Upf1-202ENSMUST00000215817 Ighv1-61P01749 117 aa10.75□□□□□ -0.69
Upf1-202ENSMUST00000215817 Ighv8-13A0A075B5Y0 101 aa10.75□□□□□ -0.69
Upf1-202ENSMUST00000215817 Gm10135F6TEE5 83 aa10.74□□□□□ -0.69
Upf1-202ENSMUST00000215817 Ndufc1Q9CQY9 76 aa10.74□□□□□ -0.69
Upf1-202ENSMUST00000215817 Ighv2-6-8A0A0A6YWY9 116 aa10.74□□□□□ -0.69
Upf1-202ENSMUST00000215817 Prr13Q9CQJ5 137 aa10.74□□□□□ -0.69
Upf1-202ENSMUST00000215817 SpenQ62504 3644 aaKnown RBP10.73□□□□□ -0.69
Upf1-202ENSMUST00000215817 Wfdc12Q9JHY3 85 aa10.73□□□□□ -0.69
Upf1-202ENSMUST00000215817 Gm17577J3QNF7 156 aa10.73□□□□□ -0.69
Upf1-202ENSMUST00000215817 P01823 113 aa10.73□□□□□ -0.69
Upf1-202ENSMUST00000215817 Gm16485Q8C4B7 115 aa10.73□□□□□ -0.69
Upf1-202ENSMUST00000215817 Ighv1-62-1A0A075B5U3 116 aa10.72□□□□□ -0.69
Upf1-202ENSMUST00000215817 Igkv4-92A0A0B4J1I2 117 aa10.72□□□□□ -0.69
Upf1-202ENSMUST00000215817 Sox16Q62247 57 aa10.7□□□□□ -0.7
Upf1-202ENSMUST00000215817 Prr15lQ8JZM2 100 aa10.7□□□□□ -0.7
Upf1-202ENSMUST00000215817 SptssbQ925E8 76 aa10.69□□□□□ -0.7
Upf1-202ENSMUST00000215817 Fam19a1Q7TPG8 133 aa10.69□□□□□ -0.7
Upf1-202ENSMUST00000215817 SnurfQ9WU12 71 aa10.69□□□□□ -0.7
Upf1-202ENSMUST00000215817 P01755 137 aa10.68□□□□□ -0.7
Upf1-202ENSMUST00000215817 Ndufs5Q99LY9 106 aa10.67□□□□□ -0.7
Upf1-202ENSMUST00000215817 Gm28374F6SG70 93 aa10.66□□□□□ -0.7
Upf1-202ENSMUST00000215817 Igkv8-26A0A075B5N5 123 aa10.66□□□□□ -0.7
Upf1-202ENSMUST00000215817 Klk9Q32M27 251 aa10.65□□□□□ -0.7
Upf1-202ENSMUST00000215817 Serp1Q9Z1W5 66 aa10.65□□□□□ -0.7
Upf1-202ENSMUST00000215817 9430015G10RikA2ASP7 199 aa10.65□□□□□ -0.7
Upf1-202ENSMUST00000215817 SycnQ8VCK7 134 aa10.64□□□□□ -0.71
Upf1-202ENSMUST00000215817 Plac8l1Q08EJ0 177 aa10.64□□□□□ -0.71
Upf1-202ENSMUST00000215817 Pde6gP09174 87 aa10.63□□□□□ -0.71
Upf1-202ENSMUST00000215817 Helz2E9QAM5 2947 aaKnown RBP10.63□□□□□ -0.71
Upf1-202ENSMUST00000215817 Ube2d4D3YUH6 135 aa10.63□□□□□ -0.71
Upf1-202ENSMUST00000215817 Pdzd2E9Q1M1 2796 aa10.62□□□□□ -0.71
Upf1-202ENSMUST00000215817 Gm884A2A9H6 3643 aa10.62□□□□□ -0.71
Upf1-202ENSMUST00000215817 Ighv2-9A0A075B5Q5 116 aa10.62□□□□□ -0.71
Upf1-202ENSMUST00000215817 6430550D23RikE9Q1X6 194 aa10.62□□□□□ -0.71
Upf1-202ENSMUST00000215817 Sec61gP60060 68 aa10.62□□□□□ -0.71
Upf1-202ENSMUST00000215817 Ube2aQ9Z255 152 aa10.62□□□□□ -0.71
Upf1-202ENSMUST00000215817 Odf3l2Q3TZ65 277 aa10.61□□□□□ -0.71
Upf1-202ENSMUST00000215817 ScxQ64124 207 aa10.61□□□□□ -0.71
Upf1-202ENSMUST00000215817 TeppQ6IMH0 216 aa10.61□□□□□ -0.71
Upf1-202ENSMUST00000215817 4930518I15RikQ3V2W7 57 aa10.6□□□□□ -0.71
Upf1-202ENSMUST00000215817 Tfpi2O35536 230 aa10.6□□□□□ -0.71
Upf1-202ENSMUST00000215817 Srrm2Q8BTI8 2703 aaKnown RBP10.6□□□□□ -0.71
Upf1-202ENSMUST00000215817 Gm9887F6RFI0 207 aa10.59□□□□□ -0.71
Upf1-202ENSMUST00000215817 1600014C23RikQ9DAX4 101 aa10.59□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms