RNA–Protein interactions for RNA: ENSMUST00000173009.7

Lig3-209, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-209ENSMUST00000173009 Gm10295Q8CCF3 114 aa12.76□□□□□ -0.37
Lig3-209ENSMUST00000173009 Trav4-3A0A0B4J1K1 110 aa12.75□□□□□ -0.37
Lig3-209ENSMUST00000173009 MifP34884 115 aaKnown RBP12.75□□□□□ -0.37
Lig3-209ENSMUST00000173009 Trav4n-4A0A075B615 110 aa12.74□□□□□ -0.37
Lig3-209ENSMUST00000173009 Hbb-b2P02089 147 aa12.74□□□□□ -0.37
Lig3-209ENSMUST00000173009 Triap1Q9D8Z2 76 aa12.74□□□□□ -0.37
Lig3-209ENSMUST00000173009 Gm11627A6PWP4 55 aa12.74□□□□□ -0.37
Lig3-209ENSMUST00000173009 Dpm2Q9Z324 84 aa12.74□□□□□ -0.37
Lig3-209ENSMUST00000173009 1700011M02RikB1AX35 88 aa12.73□□□□□ -0.37
Lig3-209ENSMUST00000173009 Scgb1b19F6WYW0 93 aa12.73□□□□□ -0.37
Lig3-209ENSMUST00000173009 Tcl1b5P56845 121 aa12.73□□□□□ -0.37
Lig3-209ENSMUST00000173009 Pou2af1Q64693 256 aa12.73□□□□□ -0.37
Lig3-209ENSMUST00000173009 Pfn2Q9JJV2 140 aa12.73□□□□□ -0.37
Lig3-209ENSMUST00000173009 Gm10065F6TJM2 114 aa12.71□□□□□ -0.37
Lig3-209ENSMUST00000173009 Plscr4P58196 326 aa12.71□□□□□ -0.37
Lig3-209ENSMUST00000173009 Gm9903Q8C9Y8 129 aa12.71□□□□□ -0.37
Lig3-209ENSMUST00000173009 Gm10518F6UQQ9 182 aa12.71□□□□□ -0.38
Lig3-209ENSMUST00000173009 Try10Q792Z1 246 aaKnown RBP12.71□□□□□ -0.38
Lig3-209ENSMUST00000173009 Gm29289A0A087WPY7 166 aa12.7□□□□□ -0.38
Lig3-209ENSMUST00000173009 Defa27F2Z403 93 aa12.7□□□□□ -0.38
Lig3-209ENSMUST00000173009 1600014C23RikQ9DAX4 101 aa12.7□□□□□ -0.38
Lig3-209ENSMUST00000173009 Tex54G3UW99 86 aa12.69□□□□□ -0.38
Lig3-209ENSMUST00000173009 Ryr1E9PZQ0 5035 aa12.69□□□□□ -0.38
Lig3-209ENSMUST00000173009 Smim1P0C8K7 78 aa12.69□□□□□ -0.38
Lig3-209ENSMUST00000173009 C920008G01RikA0A0B4J1N1 112 aa12.68□□□□□ -0.38
Lig3-209ENSMUST00000173009 1700010B08RikQ9DAI7 102 aa12.68□□□□□ -0.38
Lig3-209ENSMUST00000173009 Reg3dQ9QUS9 175 aa12.67□□□□□ -0.38
Lig3-209ENSMUST00000173009 Fat1A0A1L1SQU7 4645 aa12.67□□□□□ -0.38
Lig3-209ENSMUST00000173009 Scgb1b15A0A087WP50 93 aa12.66□□□□□ -0.38
Lig3-209ENSMUST00000173009 Gm11020F6ZGD5 61 aa12.66□□□□□ -0.38
Lig3-209ENSMUST00000173009 Krtap29-1A2A5X4 342 aa12.66□□□□□ -0.38
Lig3-209ENSMUST00000173009 Sostdc1Q9CQN4 206 aa12.66□□□□□ -0.38
Lig3-209ENSMUST00000173009 PkigO70139 76 aa12.65□□□□□ -0.38
Lig3-209ENSMUST00000173009 Fam168bQ80XQ8 194 aa12.65□□□□□ -0.38
Lig3-209ENSMUST00000173009 Cited1P97769 203 aa12.64□□□□□ -0.39
Lig3-209ENSMUST00000173009 Gm28269A0A087WSG3 125 aa12.64□□□□□ -0.39
Lig3-209ENSMUST00000173009 Znf414Q9DCK4 299 aa12.64□□□□□ -0.39
Lig3-209ENSMUST00000173009 Ube2d4D3YUH6 135 aa12.63□□□□□ -0.39
Lig3-209ENSMUST00000173009 Ccl17F6R5P4 103 aa12.63□□□□□ -0.39
Lig3-209ENSMUST00000173009 Defb45Q3V490 66 aa12.62□□□□□ -0.39
Lig3-209ENSMUST00000173009 Wfdc6bF6ULY1 148 aa12.61□□□□□ -0.39
Lig3-209ENSMUST00000173009 Defa20Q45VN2 95 aa12.61□□□□□ -0.39
Lig3-209ENSMUST00000173009 Uqcc3Q8K2T4 89 aa12.61□□□□□ -0.39
Lig3-209ENSMUST00000173009 Timm17bQ9Z0V7 172 aa12.61□□□□□ -0.39
Lig3-209ENSMUST00000173009 Pkhd1E9PZ36 4059 aa12.61□□□□□ -0.39
Lig3-209ENSMUST00000173009 Fam19a1Q7TPG8 133 aa12.6□□□□□ -0.39
Lig3-209ENSMUST00000173009 Fam19a5Q91WE9 132 aa12.6□□□□□ -0.39
Lig3-209ENSMUST00000173009 Zcchc13Q9D548 170 aa12.6□□□□□ -0.39
Lig3-209ENSMUST00000173009 SacsQ9JLC8 4582 aa12.59□□□□□ -0.39
Lig3-209ENSMUST00000173009 Vamp8O70404 101 aa12.58□□□□□ -0.39
Lig3-209ENSMUST00000173009 Ntn5Q3UQ22 452 aa12.58□□□□□ -0.39
Lig3-209ENSMUST00000173009 Obox2E9PXV9 151 aa12.58□□□□□ -0.4
Lig3-209ENSMUST00000173009 Defa3P28310 93 aa12.57□□□□□ -0.4
Lig3-209ENSMUST00000173009 Trav4d-3A0A075B625 110 aa12.56□□□□□ -0.4
Lig3-209ENSMUST00000173009 Gpr15lA0A0B4J1N3 78 aa12.56□□□□□ -0.4
Lig3-209ENSMUST00000173009 Glrp1E9Q9S8 174 aa12.56□□□□□ -0.4
Lig3-209ENSMUST00000173009 Gm10577Q3UDV9 132 aa12.56□□□□□ -0.4
Lig3-209ENSMUST00000173009 Fam104aA2A6P4 185 aa12.56□□□□□ -0.4
Lig3-209ENSMUST00000173009 Pglyrp4Q0VB07 374 aa12.56□□□□□ -0.4
Lig3-209ENSMUST00000173009 Defb9Q8R2I6 67 aa12.56□□□□□ -0.4
Lig3-209ENSMUST00000173009 ApobE9Q414 4505 aa12.55□□□□□ -0.4
Lig3-209ENSMUST00000173009 Igkv1-88A0A140T8N1 120 aa12.55□□□□□ -0.4
Lig3-209ENSMUST00000173009 4930415O20RikQ8CDT5 131 aa12.54□□□□□ -0.4
Lig3-209ENSMUST00000173009 Tal2Q62282 108 aa12.53□□□□□ -0.4
Lig3-209ENSMUST00000173009 Rpl24Q8BP67 157 aaKnown RBP12.53□□□□□ -0.4
Lig3-209ENSMUST00000173009 Ighv2-2A0A075B5P8 116 aa12.52□□□□□ -0.41
Lig3-209ENSMUST00000173009 Ighv2-5A0A0A6YY69 116 aa12.52□□□□□ -0.41
Lig3-209ENSMUST00000173009 Prol1E9PYQ4 312 aa12.52□□□□□ -0.41
Lig3-209ENSMUST00000173009 P01821 116 aa12.52□□□□□ -0.41
Lig3-209ENSMUST00000173009 Cops9Q3U898 57 aa12.52□□□□□ -0.41
Lig3-209ENSMUST00000173009 Phf5aP83870 110 aaKnown RBP12.51□□□□□ -0.41
Lig3-209ENSMUST00000173009 Defa4P28311 92 aa12.51□□□□□ -0.41
Lig3-209ENSMUST00000173009 Rpl18aP62717 176 aaKnown RBP12.51□□□□□ -0.41
Lig3-209ENSMUST00000173009 Cdk2ap2Q9CPY4 127 aa12.51□□□□□ -0.41
Lig3-209ENSMUST00000173009 BC107364E9Q5A2 140 aa12.5□□□□□ -0.41
Lig3-209ENSMUST00000173009 Tcl1b3P56842 122 aa12.5□□□□□ -0.41
Lig3-209ENSMUST00000173009 Gm10845Q3UNY9 185 aa12.5□□□□□ -0.41
Lig3-209ENSMUST00000173009 ScxQ64124 207 aa12.5□□□□□ -0.41
Lig3-209ENSMUST00000173009 Lst1O08843 95 aa12.49□□□□□ -0.41
Lig3-209ENSMUST00000173009 Cox7bP56393 80 aa12.49□□□□□ -0.41
Lig3-209ENSMUST00000173009 Igkv8-18A0A0B4J1J3 123 aa12.48□□□□□ -0.41
Lig3-209ENSMUST00000173009 P84750 121 aa12.47□□□□□ -0.41
Lig3-209ENSMUST00000173009 Smim29Q8R043 75 aa12.47□□□□□ -0.41
Lig3-209ENSMUST00000173009 Slamf6Q9ET39 351 aa12.46□□□□□ -0.41
Lig3-209ENSMUST00000173009 MalO09198 153 aa12.46□□□□□ -0.42
Lig3-209ENSMUST00000173009 Defa13P50711 93 aa12.46□□□□□ -0.42
Lig3-209ENSMUST00000173009 Rpl28P41105 137 aaKnown RBP12.45□□□□□ -0.42
Lig3-209ENSMUST00000173009 Adm2Q7TNK8 150 aa12.45□□□□□ -0.42
Lig3-209ENSMUST00000173009 Lage3Q9CR70 148 aa12.45□□□□□ -0.42
Lig3-209ENSMUST00000173009 Gemin7Q9CWY4 129 aa12.45□□□□□ -0.42
Lig3-209ENSMUST00000173009 Ociad2Q9D8W7 154 aa12.44□□□□□ -0.42
Lig3-209ENSMUST00000173009 Klk12B2RVZ0 247 aa12.43□□□□□ -0.42
Lig3-209ENSMUST00000173009 A330070K13RikQ8CA53 115 aa12.43□□□□□ -0.42
Lig3-209ENSMUST00000173009 Gm5153P01627 120 aa12.43□□□□□ -0.42
Lig3-209ENSMUST00000173009 Defa7P50705 93 aa12.43□□□□□ -0.42
Lig3-209ENSMUST00000173009 Igkv1-117A0A140T8M0 119 aa12.41□□□□□ -0.42
Lig3-209ENSMUST00000173009 Ube2bP63147 152 aa12.41□□□□□ -0.42
Lig3-209ENSMUST00000173009 Csdc2Q91YQ3 154 aa12.41□□□□□ -0.42
Lig3-209ENSMUST00000173009 Ighv1-62-2A0A0A6YXZ4 119 aa12.4□□□□□ -0.42
Lig3-209ENSMUST00000173009 Gm6793B2RXM2 351 aa12.4□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 64.9 ms