RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 P01819 144 aa10.59□□□□□ -0.71
Sdc1-205ENSMUST00000171158 Ifitm6A0A1B0GS75 124 aa10.59□□□□□ -0.71
Sdc1-205ENSMUST00000171158 4930556J24RikQ9D4U7 146 aa10.58□□□□□ -0.72
Sdc1-205ENSMUST00000171158 Tex15F8VPN2 2785 aa10.58□□□□□ -0.72
Sdc1-205ENSMUST00000171158 Nbeal2Q6ZQA0 2742 aa10.58□□□□□ -0.72
Sdc1-205ENSMUST00000171158 Igkv8-24A0A140T8P5 121 aa10.58□□□□□ -0.72
Sdc1-205ENSMUST00000171158 Tcl1b5P56845 121 aa10.58□□□□□ -0.72
Sdc1-205ENSMUST00000171158 CnbpP53996 178 aaKnown RBP10.57□□□□□ -0.72
Sdc1-205ENSMUST00000171158 Ighv2-9A0A075B5Q5 116 aa10.57□□□□□ -0.72
Sdc1-205ENSMUST00000171158 Gm10518F6UQQ9 182 aa10.57□□□□□ -0.72
Sdc1-205ENSMUST00000171158 Cox7bP56393 80 aa10.57□□□□□ -0.72
Sdc1-205ENSMUST00000171158 Gm9903Q8C9Y8 129 aa10.57□□□□□ -0.72
Sdc1-205ENSMUST00000171158 Gm11213A0A1B0GR83 88 aa10.56□□□□□ -0.72
Sdc1-205ENSMUST00000171158 Hbb-b2P02089 147 aa10.56□□□□□ -0.72
Sdc1-205ENSMUST00000171158 EnhoQ8K1D8 76 aa10.56□□□□□ -0.72
Sdc1-205ENSMUST00000171158 4930519P11RikQ9CUJ8 166 aa10.56□□□□□ -0.72
Sdc1-205ENSMUST00000171158 Igkv8-16A0A0G2JDG9 121 aa10.56□□□□□ -0.72
Sdc1-205ENSMUST00000171158 BB014433Q8C5R5 389 aa10.56□□□□□ -0.72
Sdc1-205ENSMUST00000171158 Wfdc12Q9JHY3 85 aa10.56□□□□□ -0.72
Sdc1-205ENSMUST00000171158 Gm7102J3QQ10 178 aa10.55□□□□□ -0.72
Sdc1-205ENSMUST00000171158 Igkv3-1A0A075B5P1 119 aa10.54□□□□□ -0.72
Sdc1-205ENSMUST00000171158 Gm10735Q3US96 136 aa10.53□□□□□ -0.72
Sdc1-205ENSMUST00000171158 Klk12B2RVZ0 247 aa10.53□□□□□ -0.72
Sdc1-205ENSMUST00000171158 Reg3dQ9QUS9 175 aa10.53□□□□□ -0.72
Sdc1-205ENSMUST00000171158 Gm10320E9PW43 113 aa10.52□□□□□ -0.73
Sdc1-205ENSMUST00000171158 Tenm1Q9WTS4 2731 aa10.51□□□□□ -0.73
Sdc1-205ENSMUST00000171158 Snhg11Q4G0K9 87 aa10.51□□□□□ -0.73
Sdc1-205ENSMUST00000171158 Igkv2-109A0A075B5K6 120 aa10.5□□□□□ -0.73
Sdc1-205ENSMUST00000171158 Ube2d4D3YUH6 135 aa10.5□□□□□ -0.73
Sdc1-205ENSMUST00000171158 Gm9805F6YK59 57 aa10.5□□□□□ -0.73
Sdc1-205ENSMUST00000171158 PolqQ8CGS6 2544 aa10.49□□□□□ -0.73
Sdc1-205ENSMUST00000171158 Gm28539A0A087WSL9 92 aa10.49□□□□□ -0.73
Sdc1-205ENSMUST00000171158 Igf1P05017 153 aa10.49□□□□□ -0.73
Sdc1-205ENSMUST00000171158 Phxr5P08399 672 aa10.49□□□□□ -0.73
Sdc1-205ENSMUST00000171158 Defa1P11477 93 aa10.49□□□□□ -0.73
Sdc1-205ENSMUST00000171158 Q9DAA7 145 aa10.49□□□□□ -0.73
Sdc1-205ENSMUST00000171158 Itpr2Q9Z329 2701 aa10.48□□□□□ -0.73
Sdc1-205ENSMUST00000171158 9530053A07RikE9PVG8 2581 aa10.48□□□□□ -0.73
Sdc1-205ENSMUST00000171158 Ighv10-3A0A075B5T6 119 aa10.47□□□□□ -0.73
Sdc1-205ENSMUST00000171158 Rpl18aP62717 176 aaKnown RBP10.47□□□□□ -0.73
Sdc1-205ENSMUST00000171158 AY074887Q8R5F9 132 aa10.47□□□□□ -0.73
Sdc1-205ENSMUST00000171158 E130114P18RikF6S0S7 154 aa10.47□□□□□ -0.73
Sdc1-205ENSMUST00000171158 Gm17509Q9CZ61 145 aa10.47□□□□□ -0.73
Sdc1-205ENSMUST00000171158 Notch2O35516 2470 aa10.47□□□□□ -0.73
Sdc1-205ENSMUST00000171158 Igkv4-58A0A0G2JGI6 119 aa10.46□□□□□ -0.73
Sdc1-205ENSMUST00000171158 E130208F15RikQ3UPV3 143 aa10.46□□□□□ -0.73
Sdc1-205ENSMUST00000171158 Ntn5Q3UQ22 452 aa10.46□□□□□ -0.73
Sdc1-205ENSMUST00000171158 Apoc4Q61268 124 aa10.46□□□□□ -0.73
Sdc1-205ENSMUST00000171158 Igkv8-34A0A0G2JDU0 121 aa10.46□□□□□ -0.74
Sdc1-205ENSMUST00000171158 Defa20Q45VN2 95 aa10.46□□□□□ -0.74
Sdc1-205ENSMUST00000171158 Ighv13-2A0A0A6YWN3 119 aa10.45□□□□□ -0.74
Sdc1-205ENSMUST00000171158 Ighv10-1A0A0B4J1J6 119 aa10.45□□□□□ -0.74
Sdc1-205ENSMUST00000171158 Gm10770F7D043 238 aa10.45□□□□□ -0.74
Sdc1-205ENSMUST00000171158 Hist1h4aP62806 103 aaKnown RBP10.45□□□□□ -0.74
Sdc1-205ENSMUST00000171158 Mrpl52Q9D0Y8 121 aa10.45□□□□□ -0.74
Sdc1-205ENSMUST00000171158 Igkv4-92A0A0B4J1I2 117 aa10.44□□□□□ -0.74
Sdc1-205ENSMUST00000171158 PkigO70139 76 aa10.43□□□□□ -0.74
Sdc1-205ENSMUST00000171158 Cox7b2Q9D2H1 82 aa10.42□□□□□ -0.74
Sdc1-205ENSMUST00000171158 Igkv8-26A0A075B5N5 123 aa10.42□□□□□ -0.74
Sdc1-205ENSMUST00000171158 9430015G10RikA2ASP7 199 aa10.42□□□□□ -0.74
Sdc1-205ENSMUST00000171158 Igkv8-27A0A0G2JF28 120 aa10.41□□□□□ -0.74
Sdc1-205ENSMUST00000171158 Igkv8-30A0A140T8M3 121 aa10.41□□□□□ -0.74
Sdc1-205ENSMUST00000171158 A730009L09RikA0A1B0GS82 72 aa10.41□□□□□ -0.74
Sdc1-205ENSMUST00000171158 Gm7138L7N2C3 230 aa10.41□□□□□ -0.74
Sdc1-205ENSMUST00000171158 SmcpP15265 143 aa10.41□□□□□ -0.74
Sdc1-205ENSMUST00000171158 Reg3bP35230 175 aa10.41□□□□□ -0.74
Sdc1-205ENSMUST00000171158 Defa16P50714 93 aa10.41□□□□□ -0.74
Sdc1-205ENSMUST00000171158 Gm3238W4VSP7 230 aa10.41□□□□□ -0.74
Sdc1-205ENSMUST00000171158 Defa25Q5G864 92 aa10.41□□□□□ -0.74
Sdc1-205ENSMUST00000171158 Ufsp1Q9CZP0 217 aa10.41□□□□□ -0.74
Sdc1-205ENSMUST00000171158 AtrQ9JKK8 2635 aa10.4□□□□□ -0.74
Sdc1-205ENSMUST00000171158 A0A286YCN5 57 aa10.4□□□□□ -0.74
Sdc1-205ENSMUST00000171158 Msrb1Q9JLC3 116 aa10.39□□□□□ -0.75
Sdc1-205ENSMUST00000171158 Ormdl1Q921I0 153 aa10.39□□□□□ -0.75
Sdc1-205ENSMUST00000171158 Kmt2aP55200 3966 aa10.39□□□□□ -0.75
Sdc1-205ENSMUST00000171158 2310034G01RikA0A286YDL3 209 aa10.38□□□□□ -0.75
Sdc1-205ENSMUST00000171158 Tmem254aP0DN89 123 aa10.38□□□□□ -0.75
Sdc1-205ENSMUST00000171158 Tmem254bP0DN90 123 aa10.38□□□□□ -0.75
Sdc1-205ENSMUST00000171158 Tmem254cP0DN91 123 aa10.38□□□□□ -0.75
Sdc1-205ENSMUST00000171158 Gm10308Q9CVR5 141 aa10.38□□□□□ -0.75
Sdc1-205ENSMUST00000171158 E130218I03RikA0A0U1RNU5 63 aa10.38□□□□□ -0.75
Sdc1-205ENSMUST00000171158 Igkv8-21A0A140T8P7 120 aa10.38□□□□□ -0.75
Sdc1-205ENSMUST00000171158 Cystm1Q8K353 104 aa10.37□□□□□ -0.75
Sdc1-205ENSMUST00000171158 AplnQ9R0R4 77 aa10.36□□□□□ -0.75
Sdc1-205ENSMUST00000171158 7530416G11RikJ3QJX6 159 aa10.36□□□□□ -0.75
Sdc1-205ENSMUST00000171158 Gm17577J3QNF7 156 aa10.36□□□□□ -0.75
Sdc1-205ENSMUST00000171158 4930535I16RikQ9CUI2 172 aa10.36□□□□□ -0.75
Sdc1-205ENSMUST00000171158 Smim20D3Z7Q2 69 aa10.35□□□□□ -0.75
Sdc1-205ENSMUST00000171158 Sprr4Q8CGN8 76 aa10.35□□□□□ -0.75
Sdc1-205ENSMUST00000171158 Gm5617Q91VN2 117 aa10.35□□□□□ -0.75
Sdc1-205ENSMUST00000171158 9530003J23RikQ8BM26 151 aa10.34□□□□□ -0.75
Sdc1-205ENSMUST00000171158 Trav14-1A0A0G2JF94 121 aa10.34□□□□□ -0.75
Sdc1-205ENSMUST00000171158 Igkv1-88A0A140T8N1 120 aa10.34□□□□□ -0.75
Sdc1-205ENSMUST00000171158 Inafm2A0A1L1STD6 152 aa10.34□□□□□ -0.75
Sdc1-205ENSMUST00000171158 Lamtor3O88653 124 aa10.34□□□□□ -0.75
Sdc1-205ENSMUST00000171158 Camk2n2Q78WH7 79 aa10.34□□□□□ -0.75
Sdc1-205ENSMUST00000171158 Elof1P60003 83 aa10.33□□□□□ -0.76
Sdc1-205ENSMUST00000171158 Ighv2-5A0A0A6YY69 116 aa10.32□□□□□ -0.76
Sdc1-205ENSMUST00000171158 Gm16181B0V2H2 73 aa10.32□□□□□ -0.76
Sdc1-205ENSMUST00000171158 ApcQ61315 2845 aa10.31□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 75.9 ms