RNA–Protein interactions for RNA: ENSMUST00000159337.7

Vcan-205, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 2,273 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-205ENSMUST00000159337 Ptpn13Q64512 2453 aa10.02□□□□□ -0.8
Vcan-205ENSMUST00000159337 Ccl21aP84444 133 aa10.02□□□□□ -0.81
Vcan-205ENSMUST00000159337 Ccl21bP86792 133 aa10.02□□□□□ -0.81
Vcan-205ENSMUST00000159337 Ccl21cP86793 133 aa10.02□□□□□ -0.81
Vcan-205ENSMUST00000159337 Defb26Q30KN7 186 aa10.02□□□□□ -0.81
Vcan-205ENSMUST00000159337 NbasE9Q411 2356 aa10.02□□□□□ -0.81
Vcan-205ENSMUST00000159337 4930556J24RikQ9D4U7 146 aa10.02□□□□□ -0.81
Vcan-205ENSMUST00000159337 Trav9n-4A0A075B631 113 aa10.01□□□□□ -0.81
Vcan-205ENSMUST00000159337 Ighv13-2A0A0A6YWN3 119 aa10.01□□□□□ -0.81
Vcan-205ENSMUST00000159337 2010109I03RikQ9CQ11 111 aa10.01□□□□□ -0.81
Vcan-205ENSMUST00000159337 Ighv10-1A0A0B4J1J6 119 aa10□□□□□ -0.81
Vcan-205ENSMUST00000159337 B230307C23RikQ8BLB2 64 aa10□□□□□ -0.81
Vcan-205ENSMUST00000159337 MplkipQ9D011 178 aa10□□□□□ -0.81
Vcan-205ENSMUST00000159337 C2cd3Q52KB6 2323 aa10□□□□□ -0.81
Vcan-205ENSMUST00000159337 Ndufc1Q9CQY9 76 aa10□□□□□ -0.81
Vcan-205ENSMUST00000159337 BsnO88737 3942 aa10□□□□□ -0.81
Vcan-205ENSMUST00000159337 Nf1Q04690 2841 aa10□□□□□ -0.81
Vcan-205ENSMUST00000159337 CubnQ9JLB4 3623 aa9.99□□□□□ -0.81
Vcan-205ENSMUST00000159337 Igkv4-54A0A0G2JES9 117 aa9.99□□□□□ -0.81
Vcan-205ENSMUST00000159337 E130114P18RikF6S0S7 154 aa9.99□□□□□ -0.81
Vcan-205ENSMUST00000159337 Tcl1b5P56845 121 aa9.99□□□□□ -0.81
Vcan-205ENSMUST00000159337 Igkv4-58A0A0G2JGI6 119 aa9.99□□□□□ -0.81
Vcan-205ENSMUST00000159337 Igkv1-110A0A0B4J1I0 119 aa9.98□□□□□ -0.81
Vcan-205ENSMUST00000159337 Gm10518F6UQQ9 182 aa9.98□□□□□ -0.81
Vcan-205ENSMUST00000159337 Gm9805F6YK59 57 aa9.98□□□□□ -0.81
Vcan-205ENSMUST00000159337 Wnk1P83741 2377 aa9.98□□□□□ -0.81
Vcan-205ENSMUST00000159337 Ankrd17Q99NH0 2603 aaKnown RBP9.98□□□□□ -0.81
Vcan-205ENSMUST00000159337 Abca12E9Q876 2595 aa9.98□□□□□ -0.81
Vcan-205ENSMUST00000159337 Prh1P05142 261 aa9.98□□□□□ -0.81
Vcan-205ENSMUST00000159337 PrcdQ00LT2 53 aa9.96□□□□□ -0.82
Vcan-205ENSMUST00000159337 Brk1Q91VR8 75 aa9.96□□□□□ -0.82
Vcan-205ENSMUST00000159337 Gm10770F7D043 238 aa9.95□□□□□ -0.82
Vcan-205ENSMUST00000159337 Lamtor3O88653 124 aa9.95□□□□□ -0.82
Vcan-205ENSMUST00000159337 Zfyve26Q5DU37 2529 aa9.95□□□□□ -0.82
Vcan-205ENSMUST00000159337 Igkv8-16A0A0G2JDG9 121 aa9.94□□□□□ -0.82
Vcan-205ENSMUST00000159337 Trbv13-2A0A140T8N6 113 aa9.94□□□□□ -0.82
Vcan-205ENSMUST00000159337 Ly6c2P0CW03 131 aa9.94□□□□□ -0.82
Vcan-205ENSMUST00000159337 Cd99Q8VCN6 175 aa9.94□□□□□ -0.82
Vcan-205ENSMUST00000159337 BaalcQ8VHV1 145 aa9.94□□□□□ -0.82
Vcan-205ENSMUST00000159337 Pdzd2E9Q1M1 2796 aa9.94□□□□□ -0.82
Vcan-205ENSMUST00000159337 Myo9aQ8C170 2542 aa9.94□□□□□ -0.82
Vcan-205ENSMUST00000159337 Igkv3-9A0A140T8P4 119 aa9.94□□□□□ -0.82
Vcan-205ENSMUST00000159337 Wfdc12Q9JHY3 85 aa9.94□□□□□ -0.82
Vcan-205ENSMUST00000159337 Reg3dQ9QUS9 175 aa9.94□□□□□ -0.82
Vcan-205ENSMUST00000159337 Akap13E9Q394 2776 aa9.93□□□□□ -0.82
Vcan-205ENSMUST00000159337 9530003J23RikQ8BM26 151 aa9.93□□□□□ -0.82
Vcan-205ENSMUST00000159337 Kmt2bO08550 2713 aa9.93□□□□□ -0.82
Vcan-205ENSMUST00000159337 Gm17689B3GLJ4 109 aa9.93□□□□□ -0.82
Vcan-205ENSMUST00000159337 BikO70337 150 aa9.93□□□□□ -0.82
Vcan-205ENSMUST00000159337 Pde6gP09174 87 aa9.93□□□□□ -0.82
Vcan-205ENSMUST00000159337 Fam19a3Q7TPG6 132 aa9.93□□□□□ -0.82
Vcan-205ENSMUST00000159337 A730071L15RikQ8C4X0 137 aa9.93□□□□□ -0.82
Vcan-205ENSMUST00000159337 Serp1Q9Z1W5 66 aa9.92□□□□□ -0.82
Vcan-205ENSMUST00000159337 Ighv2-2A0A075B5P8 116 aa9.91□□□□□ -0.82
Vcan-205ENSMUST00000159337 P01821 116 aa9.91□□□□□ -0.82
Vcan-205ENSMUST00000159337 CrygeQ03740 174 aa9.91□□□□□ -0.82
Vcan-205ENSMUST00000159337 A830005F24RikQ8BRT5 167 aa9.91□□□□□ -0.82
Vcan-205ENSMUST00000159337 Msrb1Q9JLC3 116 aa9.91□□□□□ -0.82
Vcan-205ENSMUST00000159337 Ank2Q8C8R3 3898 aa9.91□□□□□ -0.82
Vcan-205ENSMUST00000159337 Rbm3O89086 153 aaKnown RBP9.91□□□□□ -0.82
Vcan-205ENSMUST00000159337 SnurfQ9WU12 71 aa9.91□□□□□ -0.82
Vcan-205ENSMUST00000159337 Igkv8-34A0A0G2JDU0 121 aa9.9□□□□□ -0.82
Vcan-205ENSMUST00000159337 Igkv8-24A0A140T8P5 121 aa9.9□□□□□ -0.82
Vcan-205ENSMUST00000159337 Higd2aQ9CQJ1 106 aa9.9□□□□□ -0.82
Vcan-205ENSMUST00000159337 Rif1Q6PR54 2419 aaKnown RBP9.9□□□□□ -0.82
Vcan-205ENSMUST00000159337 AY074887Q8R5F9 132 aa9.9□□□□□ -0.83
Vcan-205ENSMUST00000159337 Bahcc1Q3UHR0 2643 aa9.89□□□□□ -0.83
Vcan-205ENSMUST00000159337 Klk9Q32M27 251 aa9.89□□□□□ -0.83
Vcan-205ENSMUST00000159337 Krtap11-1E9Q2E9 183 aa9.88□□□□□ -0.83
Vcan-205ENSMUST00000159337 E130218I03RikA0A0U1RNU5 63 aa9.86□□□□□ -0.83
Vcan-205ENSMUST00000159337 Gm10337F7DEP7 55 aa9.86□□□□□ -0.83
Vcan-205ENSMUST00000159337 Vpreb1P13372 142 aa9.86□□□□□ -0.83
Vcan-205ENSMUST00000159337 Defa20Q45VN2 95 aa9.85□□□□□ -0.83
Vcan-205ENSMUST00000159337 2310034G01RikA0A286YDL3 209 aa9.85□□□□□ -0.83
Vcan-205ENSMUST00000159337 Tep1P97499 2629 aa9.83□□□□□ -0.84
Vcan-205ENSMUST00000159337 Q8R092 253 aa9.83□□□□□ -0.84
Vcan-205ENSMUST00000159337 Tenm3Q9WTS6 2715 aa9.83□□□□□ -0.84
Vcan-205ENSMUST00000159337 Gm11213A0A1B0GR83 88 aa9.82□□□□□ -0.84
Vcan-205ENSMUST00000159337 Pet100P0DJE0 76 aa9.82□□□□□ -0.84
Vcan-205ENSMUST00000159337 Igkv8-28A0A0G2JE47 121 aa9.82□□□□□ -0.84
Vcan-205ENSMUST00000159337 Elof1P60003 83 aa9.82□□□□□ -0.84
Vcan-205ENSMUST00000159337 Leap2Q91V13 76 aa9.82□□□□□ -0.84
Vcan-205ENSMUST00000159337 Dph3Q8K0W9 82 aa9.81□□□□□ -0.84
Vcan-205ENSMUST00000159337 Gm17509Q9CZ61 145 aa9.8□□□□□ -0.84
Vcan-205ENSMUST00000159337 Mrpl55Q9CZ83 127 aa9.8□□□□□ -0.84
Vcan-205ENSMUST00000159337 NipblQ6KCD5 2798 aaKnown RBP9.79□□□□□ -0.84
Vcan-205ENSMUST00000159337 UqcrqQ9CQ69 82 aa9.79□□□□□ -0.84
Vcan-205ENSMUST00000159337 Muc2Q80Z19 2680 aa9.79□□□□□ -0.84
Vcan-205ENSMUST00000159337 FlnaQ8BTM8 2647 aaKnown RBP9.79□□□□□ -0.84
Vcan-205ENSMUST00000159337 Igkv4-92A0A0B4J1I2 117 aa9.79□□□□□ -0.84
Vcan-205ENSMUST00000159337 Defa27F2Z403 93 aa9.79□□□□□ -0.84
Vcan-205ENSMUST00000159337 D730001G18RikA0A087WQU7 115 aa9.78□□□□□ -0.84
Vcan-205ENSMUST00000159337 Dad1P61804 113 aa9.78□□□□□ -0.84
Vcan-205ENSMUST00000159337 P06320 134 aa9.77□□□□□ -0.84
Vcan-205ENSMUST00000159337 Hspg2Q05793 3707 aaKnown RBP9.76□□□□□ -0.85
Vcan-205ENSMUST00000159337 Gm9767G3X930 207 aa9.76□□□□□ -0.85
Vcan-205ENSMUST00000159337 BC048502Q80Y74 154 aa9.76□□□□□ -0.85
Vcan-205ENSMUST00000159337 Ufsp1Q9CZP0 217 aa9.76□□□□□ -0.85
Vcan-205ENSMUST00000159337 Cd164Q9R0L9 197 aa9.76□□□□□ -0.85
Vcan-205ENSMUST00000159337 H2al1bA0A087WP11 105 aa9.75□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms