RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 2310009B15RikA0A0A6YWI4 143 aa12.91□□□□□ -0.34
Sort1-203ENSMUST00000135636 Rtl10D3YWW5 146 aa12.91□□□□□ -0.34
Sort1-203ENSMUST00000135636 Reg3aO09037 175 aa12.91□□□□□ -0.34
Sort1-203ENSMUST00000135636 Gm10577Q3UDV9 132 aa12.9□□□□□ -0.34
Sort1-203ENSMUST00000135636 Snhg11Q4G0K9 87 aa12.89□□□□□ -0.35
Sort1-203ENSMUST00000135636 BC067074F6RXI4 2391 aa12.89□□□□□ -0.35
Sort1-203ENSMUST00000135636 Gm10999F6Q4M4 69 aa12.89□□□□□ -0.35
Sort1-203ENSMUST00000135636 Znf414Q9DCK4 299 aa12.88□□□□□ -0.35
Sort1-203ENSMUST00000135636 Sprr2jO70561 109 aa12.87□□□□□ -0.35
Sort1-203ENSMUST00000135636 4930432M17RikQ3V0W9 174 aa12.87□□□□□ -0.35
Sort1-203ENSMUST00000135636 Gm9573F7C950 1606 aa12.87□□□□□ -0.35
Sort1-203ENSMUST00000135636 Gm16181B0V2H2 73 aa12.86□□□□□ -0.35
Sort1-203ENSMUST00000135636 BtcQ05928 177 aa12.85□□□□□ -0.35
Sort1-203ENSMUST00000135636 Atp5eP56382 52 aa12.83□□□□□ -0.35
Sort1-203ENSMUST00000135636 Rif1Q6PR54 2419 aaKnown RBP12.83□□□□□ -0.36
Sort1-203ENSMUST00000135636 Krtap27-1E9PX37 202 aa12.83□□□□□ -0.36
Sort1-203ENSMUST00000135636 UqcrqQ9CQ69 82 aa12.83□□□□□ -0.36
Sort1-203ENSMUST00000135636 Smim1P0C8K7 78 aa12.82□□□□□ -0.36
Sort1-203ENSMUST00000135636 E130208F15RikQ3UPV3 143 aa12.82□□□□□ -0.36
Sort1-203ENSMUST00000135636 Igkv8-27A0A0G2JF28 120 aa12.8□□□□□ -0.36
Sort1-203ENSMUST00000135636 Flg2Q2VIS4 2362 aa12.79□□□□□ -0.36
Sort1-203ENSMUST00000135636 Bean1Q9EQG5 255 aa12.79□□□□□ -0.36
Sort1-203ENSMUST00000135636 Gm10837Q3UTT8 145 aa12.78□□□□□ -0.36
Sort1-203ENSMUST00000135636 2310034G01RikA0A286YDL3 209 aa12.77□□□□□ -0.37
Sort1-203ENSMUST00000135636 Chchd10Q7TNL9 138 aa12.76□□□□□ -0.37
Sort1-203ENSMUST00000135636 Gm7138L7N2C3 230 aa12.74□□□□□ -0.37
Sort1-203ENSMUST00000135636 Fam168bQ80XQ8 194 aa12.74□□□□□ -0.37
Sort1-203ENSMUST00000135636 4930524J08RikQ9CUJ5 163 aa12.74□□□□□ -0.37
Sort1-203ENSMUST00000135636 Gm3238W4VSP7 230 aa12.74□□□□□ -0.37
Sort1-203ENSMUST00000135636 Gm7137J3QMW1 236 aa12.73□□□□□ -0.37
Sort1-203ENSMUST00000135636 Gm21886J3QJU9 214 aa12.72□□□□□ -0.37
Sort1-203ENSMUST00000135636 Lrrk2Q5S006 2527 aa12.72□□□□□ -0.37
Sort1-203ENSMUST00000135636 Mrpl34Q99N91 92 aa12.7□□□□□ -0.38
Sort1-203ENSMUST00000135636 Znf580Q9DB38 172 aa12.68□□□□□ -0.38
Sort1-203ENSMUST00000135636 A930002H24RikQ8C8Y3 163 aa12.67□□□□□ -0.38
Sort1-203ENSMUST00000135636 Cdip1Q9DB75 208 aa12.67□□□□□ -0.38
Sort1-203ENSMUST00000135636 Pou2af1Q64693 256 aa12.67□□□□□ -0.38
Sort1-203ENSMUST00000135636 Fam19a3Q7TPG6 132 aa12.65□□□□□ -0.38
Sort1-203ENSMUST00000135636 Cox6a2P43023 97 aa12.65□□□□□ -0.39
Sort1-203ENSMUST00000135636 Msrb1Q9JLC3 116 aa12.65□□□□□ -0.39
Sort1-203ENSMUST00000135636 AplnQ9R0R4 77 aa12.64□□□□□ -0.39
Sort1-203ENSMUST00000135636 OxtP35454 125 aa12.64□□□□□ -0.39
Sort1-203ENSMUST00000135636 Zfyve26Q5DU37 2529 aa12.63□□□□□ -0.39
Sort1-203ENSMUST00000135636 Gm12216A0A1W2P827 62 aa12.63□□□□□ -0.39
Sort1-203ENSMUST00000135636 Gm43218A0A0G2JGT0 114 aa12.62□□□□□ -0.39
Sort1-203ENSMUST00000135636 6430550D23RikE9Q1X6 194 aa12.62□□□□□ -0.39
Sort1-203ENSMUST00000135636 Plac8Q9JI48 112 aa12.62□□□□□ -0.39
Sort1-203ENSMUST00000135636 CenpwQ3URR0 86 aa12.6□□□□□ -0.39
Sort1-203ENSMUST00000135636 Gm10549Q3URY4 149 aa12.6□□□□□ -0.39
Sort1-203ENSMUST00000135636 CnfnQ6PCW6 111 aa12.6□□□□□ -0.39
Sort1-203ENSMUST00000135636 Gm10845Q3UNY9 185 aa12.59□□□□□ -0.39
Sort1-203ENSMUST00000135636 Nav3Q80TN7 2359 aa12.59□□□□□ -0.39
Sort1-203ENSMUST00000135636 Dmac1Q9CQ00 111 aa12.58□□□□□ -0.4
Sort1-203ENSMUST00000135636 Gm11627A6PWP4 55 aa12.57□□□□□ -0.4
Sort1-203ENSMUST00000135636 Sptbn4E9PX29 2561 aa12.56□□□□□ -0.4
Sort1-203ENSMUST00000135636 Gm44790A0A0N4SV91 103 aa12.55□□□□□ -0.4
Sort1-203ENSMUST00000135636 Gm17689B3GLJ4 109 aa12.55□□□□□ -0.4
Sort1-203ENSMUST00000135636 Csdc2Q91YQ3 154 aa12.55□□□□□ -0.4
Sort1-203ENSMUST00000135636 Anapc11Q9CPX9 84 aa12.55□□□□□ -0.4
Sort1-203ENSMUST00000135636 Gm10135F6TEE5 83 aa12.55□□□□□ -0.4
Sort1-203ENSMUST00000135636 Pla2g10Q9QXX3 151 aa12.55□□□□□ -0.4
Sort1-203ENSMUST00000135636 Q8BGJ3 129 aa12.54□□□□□ -0.4
Sort1-203ENSMUST00000135636 Gm27235Q3UW50 83 aa12.53□□□□□ -0.4
Sort1-203ENSMUST00000135636 Notch2O35516 2470 aa12.53□□□□□ -0.4
Sort1-203ENSMUST00000135636 Ighv2-2A0A075B5P8 116 aa12.53□□□□□ -0.4
Sort1-203ENSMUST00000135636 P01821 116 aa12.53□□□□□ -0.4
Sort1-203ENSMUST00000135636 Sox16Q62247 57 aa12.53□□□□□ -0.4
Sort1-203ENSMUST00000135636 CrygaP04345 174 aa12.52□□□□□ -0.4
Sort1-203ENSMUST00000135636 Krtap11-1E9Q2E9 183 aa12.5□□□□□ -0.41
Sort1-203ENSMUST00000135636 B430305J03RikQ8BQQ8 176 aa12.49□□□□□ -0.41
Sort1-203ENSMUST00000135636 Nav2E9Q842 2432 aa12.49□□□□□ -0.41
Sort1-203ENSMUST00000135636 Ankhd1E9PUR0 2548 aaKnown RBP12.49□□□□□ -0.41
Sort1-203ENSMUST00000135636 SnurfQ9WU12 71 aa12.49□□□□□ -0.41
Sort1-203ENSMUST00000135636 Gm26661M0QWV4 156 aa12.48□□□□□ -0.41
Sort1-203ENSMUST00000135636 7530416G11RikJ3QJX6 159 aa12.46□□□□□ -0.41
Sort1-203ENSMUST00000135636 Ypel4Q65Z93 127 aa12.46□□□□□ -0.41
Sort1-203ENSMUST00000135636 Gm20661K7N787 53 aa12.46□□□□□ -0.41
Sort1-203ENSMUST00000135636 Gm28539A0A087WSL9 92 aa12.43□□□□□ -0.42
Sort1-203ENSMUST00000135636 Rnase13Q5GAM7 153 aa12.43□□□□□ -0.42
Sort1-203ENSMUST00000135636 UtrnE9Q6R7 3430 aa12.43□□□□□ -0.42
Sort1-203ENSMUST00000135636 Limd2Q8BGB5 128 aa12.42□□□□□ -0.42
Sort1-203ENSMUST00000135636 Gm10160F6Y577 67 aa12.4□□□□□ -0.42
Sort1-203ENSMUST00000135636 Hivep3A2A884 2348 aa12.4□□□□□ -0.42
Sort1-203ENSMUST00000135636 Q8BT88 171 aa12.39□□□□□ -0.43
Sort1-203ENSMUST00000135636 Defb9Q8R2I6 67 aa12.38□□□□□ -0.43
Sort1-203ENSMUST00000135636 Spink13Q3UTS8 97 aa12.37□□□□□ -0.43
Sort1-203ENSMUST00000135636 Gm10770F7D043 238 aa12.37□□□□□ -0.43
Sort1-203ENSMUST00000135636 Elof1P60003 83 aa12.36□□□□□ -0.43
Sort1-203ENSMUST00000135636 BC025920Q3US60 128 aa12.36□□□□□ -0.43
Sort1-203ENSMUST00000135636 4930507D05RikQ8C9C9 103 aa12.36□□□□□ -0.43
Sort1-203ENSMUST00000135636 MobpQ9D2P8 170 aa12.36□□□□□ -0.43
Sort1-203ENSMUST00000135636 Phxr5P08399 672 aa12.35□□□□□ -0.43
Sort1-203ENSMUST00000135636 Piezo2Q8CD54 2822 aa12.34□□□□□ -0.43
Sort1-203ENSMUST00000135636 Gm10772F7AIG4 85 aa12.31□□□□□ -0.44
Sort1-203ENSMUST00000135636 Ttc28Q80XJ3 2450 aa12.31□□□□□ -0.44
Sort1-203ENSMUST00000135636 Piezo1E2JF22 2547 aa12.3□□□□□ -0.44
Sort1-203ENSMUST00000135636 Sostdc1Q9CQN4 206 aa12.29□□□□□ -0.44
Sort1-203ENSMUST00000135636 Chd8Q09XV5 2582 aaKnown RBP12.28□□□□□ -0.44
Sort1-203ENSMUST00000135636 Hcfc1Q61191 2045 aaKnown RBP12.25□□□□□ -0.45
Sort1-203ENSMUST00000135636 3110070M22RikQ9DAQ7 118 aa12.24□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 90.1 ms