RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Gm10767Q3TQP0 103 aa10.72□□□□□ -0.69
Trim39-203ENSMUST00000113706 C530025M09RikF6RGA8 229 aa10.71□□□□□ -0.69
Trim39-203ENSMUST00000113706 E130208F15RikQ3UPV3 143 aa10.71□□□□□ -0.69
Trim39-203ENSMUST00000113706 Wdr38Q9D994 303 aa10.71□□□□□ -0.69
Trim39-203ENSMUST00000113706 Gm11213A0A1B0GR83 88 aa10.71□□□□□ -0.7
Trim39-203ENSMUST00000113706 Reg3bP35230 175 aa10.7□□□□□ -0.7
Trim39-203ENSMUST00000113706 Trav13-1A0A075B644 110 aa10.69□□□□□ -0.7
Trim39-203ENSMUST00000113706 Pglyrp4Q0VB07 374 aa10.69□□□□□ -0.7
Trim39-203ENSMUST00000113706 Smim20D3Z7Q2 69 aa10.69□□□□□ -0.7
Trim39-203ENSMUST00000113706 TeppQ6IMH0 216 aa10.69□□□□□ -0.7
Trim39-203ENSMUST00000113706 Tmem86bQ497J1 226 aa10.68□□□□□ -0.7
Trim39-203ENSMUST00000113706 Dnah17Q69Z23 4481 aa10.68□□□□□ -0.7
Trim39-203ENSMUST00000113706 2010109I03RikQ9CQ11 111 aa10.68□□□□□ -0.7
Trim39-203ENSMUST00000113706 Ighv1-56A0A0A6YXG2 117 aa10.67□□□□□ -0.7
Trim39-203ENSMUST00000113706 Ighv13-2A0A0A6YWN3 119 aa10.66□□□□□ -0.7
Trim39-203ENSMUST00000113706 Defa2P28309 93 aa10.66□□□□□ -0.7
Trim39-203ENSMUST00000113706 Defb29Q8BGW9 78 aa10.66□□□□□ -0.7
Trim39-203ENSMUST00000113706 SvipQ3UZP4 77 aa10.65□□□□□ -0.7
Trim39-203ENSMUST00000113706 Igkv1-35A0A0G2JDE5 120 aa10.64□□□□□ -0.71
Trim39-203ENSMUST00000113706 4930524J08RikQ9CUJ5 163 aa10.64□□□□□ -0.71
Trim39-203ENSMUST00000113706 Igkv8-24A0A140T8P5 121 aa10.63□□□□□ -0.71
Trim39-203ENSMUST00000113706 Dnah7bL7N1Y0 4068 aa10.63□□□□□ -0.71
Trim39-203ENSMUST00000113706 Trav13-2A0A075B649 110 aa10.62□□□□□ -0.71
Trim39-203ENSMUST00000113706 1700020N15RikL7MTX3 112 aa10.62□□□□□ -0.71
Trim39-203ENSMUST00000113706 B9d2Q3UK10 175 aa10.62□□□□□ -0.71
Trim39-203ENSMUST00000113706 Gm10251J3QPM5 127 aa10.62□□□□□ -0.71
Trim39-203ENSMUST00000113706 Xlr5cQ9JJR2 179 aa10.62□□□□□ -0.71
Trim39-203ENSMUST00000113706 Gm867A0A1W2P7T4 151 aa10.61□□□□□ -0.71
Trim39-203ENSMUST00000113706 Dnah1E9Q8T7 4250 aa10.61□□□□□ -0.71
Trim39-203ENSMUST00000113706 MifP34884 115 aaKnown RBP10.61□□□□□ -0.71
Trim39-203ENSMUST00000113706 Gm3618D3Z4P5 127 aa10.6□□□□□ -0.71
Trim39-203ENSMUST00000113706 Gm10845Q3UNY9 185 aa10.6□□□□□ -0.71
Trim39-203ENSMUST00000113706 Gm2916Q9D9B9 127 aa10.6□□□□□ -0.71
Trim39-203ENSMUST00000113706 Trav13n-2A0A0G2JF93 110 aa10.6□□□□□ -0.71
Trim39-203ENSMUST00000113706 PkigO70139 76 aa10.6□□□□□ -0.71
Trim39-203ENSMUST00000113706 5730596B20RikQ8BQ08 205 aa10.6□□□□□ -0.71
Trim39-203ENSMUST00000113706 Igkv8-18A0A0B4J1J3 123 aa10.59□□□□□ -0.71
Trim39-203ENSMUST00000113706 Smlr1J3QMJ4 66 aa10.59□□□□□ -0.71
Trim39-203ENSMUST00000113706 Gm5153P01627 120 aa10.59□□□□□ -0.71
Trim39-203ENSMUST00000113706 Gm5142Q8C5X9 133 aa10.59□□□□□ -0.71
Trim39-203ENSMUST00000113706 Gm16381A0A1Y7VKT9 73 aa10.59□□□□□ -0.71
Trim39-203ENSMUST00000113706 Tcl1b3P56842 122 aa10.58□□□□□ -0.72
Trim39-203ENSMUST00000113706 Znf414Q9DCK4 299 aa10.58□□□□□ -0.72
Trim39-203ENSMUST00000113706 Wfdc12Q9JHY3 85 aa10.58□□□□□ -0.72
Trim39-203ENSMUST00000113706 Igkv8-16A0A0G2JDG9 121 aa10.55□□□□□ -0.72
Trim39-203ENSMUST00000113706 Smim26Q3V460 107 aa10.55□□□□□ -0.72
Trim39-203ENSMUST00000113706 Lyrm7Q9DA03 104 aa10.55□□□□□ -0.72
Trim39-203ENSMUST00000113706 Gm10518F6UQQ9 182 aa10.55□□□□□ -0.72
Trim39-203ENSMUST00000113706 Defa1P11477 93 aa10.55□□□□□ -0.72
Trim39-203ENSMUST00000113706 Ighv2-9A0A075B5Q5 116 aa10.54□□□□□ -0.72
Trim39-203ENSMUST00000113706 Acyp1P56376 99 aa10.54□□□□□ -0.72
Trim39-203ENSMUST00000113706 4930556J24RikQ9D4U7 146 aa10.54□□□□□ -0.72
Trim39-203ENSMUST00000113706 Csmd3Q80T79 3707 aa10.54□□□□□ -0.72
Trim39-203ENSMUST00000113706 Gm17349F7BGH6 99 aa10.54□□□□□ -0.72
Trim39-203ENSMUST00000113706 Tcl1b5P56845 121 aa10.54□□□□□ -0.72
Trim39-203ENSMUST00000113706 Gm9903Q8C9Y8 129 aa10.54□□□□□ -0.72
Trim39-203ENSMUST00000113706 Csdc2Q91YQ3 154 aa10.54□□□□□ -0.72
Trim39-203ENSMUST00000113706 Dnal4Q9DCM4 105 aa10.54□□□□□ -0.72
Trim39-203ENSMUST00000113706 P01819 144 aa10.53□□□□□ -0.72
Trim39-203ENSMUST00000113706 Trav14d-3-dv8A0A075B619 120 aa10.52□□□□□ -0.72
Trim39-203ENSMUST00000113706 1810062G17RikG3X8Y2 129 aa10.52□□□□□ -0.72
Trim39-203ENSMUST00000113706 Cox7b2Q9D2H1 82 aa10.52□□□□□ -0.72
Trim39-203ENSMUST00000113706 A730009L09RikA0A1B0GS82 72 aa10.52□□□□□ -0.73
Trim39-203ENSMUST00000113706 Gm17509Q9CZ61 145 aa10.52□□□□□ -0.73
Trim39-203ENSMUST00000113706 Gm9508A0A1W2P7W0 230 aa10.52□□□□□ -0.73
Trim39-203ENSMUST00000113706 CnbpP53996 178 aaKnown RBP10.52□□□□□ -0.73
Trim39-203ENSMUST00000113706 Gm5617Q91VN2 117 aa10.52□□□□□ -0.73
Trim39-203ENSMUST00000113706 Gm4707V9GXN5 68 aa10.52□□□□□ -0.73
Trim39-203ENSMUST00000113706 Trav3-4A0A075B654 114 aa10.51□□□□□ -0.73
Trim39-203ENSMUST00000113706 Cox7bP56393 80 aa10.51□□□□□ -0.73
Trim39-203ENSMUST00000113706 Gm16485Q8C4B7 115 aa10.5□□□□□ -0.73
Trim39-203ENSMUST00000113706 Rpl39lQ9CQD0 51 aa10.5□□□□□ -0.73
Trim39-203ENSMUST00000113706 Huwe1Q7TMY8 4377 aaKnown RBP10.5□□□□□ -0.73
Trim39-203ENSMUST00000113706 Gm10320E9PW43 113 aa10.5□□□□□ -0.73
Trim39-203ENSMUST00000113706 AW011738F6S7Q2 159 aa10.5□□□□□ -0.73
Trim39-203ENSMUST00000113706 Tmem213Q08EA8 116 aa10.5□□□□□ -0.73
Trim39-203ENSMUST00000113706 Reg3dQ9QUS9 175 aa10.5□□□□□ -0.73
Trim39-203ENSMUST00000113706 Igkv4-92A0A0B4J1I2 117 aa10.48□□□□□ -0.73
Trim39-203ENSMUST00000113706 9430015G10RikA2ASP7 199 aa10.48□□□□□ -0.73
Trim39-203ENSMUST00000113706 A0A286YCN5 57 aa10.48□□□□□ -0.73
Trim39-203ENSMUST00000113706 Dync2h1Q45VK7 4306 aa10.48□□□□□ -0.73
Trim39-203ENSMUST00000113706 AY074887Q8R5F9 132 aa10.47□□□□□ -0.73
Trim39-203ENSMUST00000113706 Ube2d4D3YUH6 135 aa10.47□□□□□ -0.73
Trim39-203ENSMUST00000113706 Defa16P50714 93 aa10.47□□□□□ -0.73
Trim39-203ENSMUST00000113706 Sprr4Q8CGN8 76 aa10.47□□□□□ -0.73
Trim39-203ENSMUST00000113706 Ifitm6A0A1B0GS75 124 aa10.46□□□□□ -0.73
Trim39-203ENSMUST00000113706 Klk12B2RVZ0 247 aa10.46□□□□□ -0.73
Trim39-203ENSMUST00000113706 Ufsp1Q9CZP0 217 aa10.46□□□□□ -0.73
Trim39-203ENSMUST00000113706 Defa20Q45VN2 95 aa10.46□□□□□ -0.73
Trim39-203ENSMUST00000113706 Xcl1P47993 114 aa10.45□□□□□ -0.74
Trim39-203ENSMUST00000113706 Rpl18aP62717 176 aaKnown RBP10.45□□□□□ -0.74
Trim39-203ENSMUST00000113706 MrapQ9D159 127 aa10.45□□□□□ -0.74
Trim39-203ENSMUST00000113706 Gm28539A0A087WSL9 92 aa10.45□□□□□ -0.74
Trim39-203ENSMUST00000113706 Hbb-b2P02089 147 aa10.45□□□□□ -0.74
Trim39-203ENSMUST00000113706 Camk2n2Q78WH7 79 aa10.45□□□□□ -0.74
Trim39-203ENSMUST00000113706 Megf8P60882 2789 aa10.44□□□□□ -0.74
Trim39-203ENSMUST00000113706 Gm9805F6YK59 57 aa10.44□□□□□ -0.74
Trim39-203ENSMUST00000113706 2310061N02RikQ9D6S9 174 aa10.43□□□□□ -0.74
Trim39-203ENSMUST00000113706 Defa4P28311 92 aa10.42□□□□□ -0.74
Trim39-203ENSMUST00000113706 Atp5eP56382 52 aa10.42□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 77.6 ms