RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Gm10251J3QPM5 127 aa10.51□□□□□ -0.73
Vcan-201ENSMUST00000109543 Acyp1P56376 99 aa10.51□□□□□ -0.73
Vcan-201ENSMUST00000109543 Wfdc12Q9JHY3 85 aa10.51□□□□□ -0.73
Vcan-201ENSMUST00000109543 Gm10518F6UQQ9 182 aa10.51□□□□□ -0.73
Vcan-201ENSMUST00000109543 Gm11213A0A1B0GR83 88 aa10.5□□□□□ -0.73
Vcan-201ENSMUST00000109543 Gm36176A0A1W2P8D5 158 aa10.49□□□□□ -0.73
Vcan-201ENSMUST00000109543 Hivep1Q03172 2688 aa10.49□□□□□ -0.73
Vcan-201ENSMUST00000109543 Kmt2aP55200 3966 aa10.49□□□□□ -0.73
Vcan-201ENSMUST00000109543 Ighv13-2A0A0A6YWN3 119 aa10.49□□□□□ -0.73
Vcan-201ENSMUST00000109543 Gm10845Q3UNY9 185 aa10.49□□□□□ -0.73
Vcan-201ENSMUST00000109543 Trav14d-3-dv8A0A075B619 120 aa10.48□□□□□ -0.73
Vcan-201ENSMUST00000109543 9530053A07RikE9PVG8 2581 aa10.48□□□□□ -0.73
Vcan-201ENSMUST00000109543 4930556J24RikQ9D4U7 146 aa10.47□□□□□ -0.73
Vcan-201ENSMUST00000109543 Reg3dQ9QUS9 175 aa10.47□□□□□ -0.73
Vcan-201ENSMUST00000109543 Fn1P11276 2477 aaKnown RBP10.47□□□□□ -0.73
Vcan-201ENSMUST00000109543 Tmem213Q08EA8 116 aa10.47□□□□□ -0.73
Vcan-201ENSMUST00000109543 E130208F15RikQ3UPV3 143 aa10.47□□□□□ -0.73
Vcan-201ENSMUST00000109543 Rpl39lQ9CQD0 51 aa10.47□□□□□ -0.73
Vcan-201ENSMUST00000109543 Trav3-4A0A075B654 114 aa10.46□□□□□ -0.73
Vcan-201ENSMUST00000109543 Reg3bP35230 175 aa10.46□□□□□ -0.73
Vcan-201ENSMUST00000109543 Tcl1b5P56845 121 aa10.46□□□□□ -0.73
Vcan-201ENSMUST00000109543 Ighv2-9A0A075B5Q5 116 aa10.46□□□□□ -0.74
Vcan-201ENSMUST00000109543 Xcl1P47993 114 aa10.45□□□□□ -0.74
Vcan-201ENSMUST00000109543 Csdc2Q91YQ3 154 aa10.45□□□□□ -0.74
Vcan-201ENSMUST00000109543 Znf414Q9DCK4 299 aa10.45□□□□□ -0.74
Vcan-201ENSMUST00000109543 P01819 144 aa10.44□□□□□ -0.74
Vcan-201ENSMUST00000109543 Cox7bP56393 80 aa10.44□□□□□ -0.74
Vcan-201ENSMUST00000109543 Defa20Q45VN2 95 aa10.44□□□□□ -0.74
Vcan-201ENSMUST00000109543 Gm9903Q8C9Y8 129 aa10.44□□□□□ -0.74
Vcan-201ENSMUST00000109543 Srrm2Q8BTI8 2703 aaKnown RBP10.44□□□□□ -0.74
Vcan-201ENSMUST00000109543 Klk12B2RVZ0 247 aa10.43□□□□□ -0.74
Vcan-201ENSMUST00000109543 1810062G17RikG3X8Y2 129 aa10.43□□□□□ -0.74
Vcan-201ENSMUST00000109543 Gm7137J3QMW1 236 aa10.43□□□□□ -0.74
Vcan-201ENSMUST00000109543 Nsd1O88491 2588 aaKnown RBP10.43□□□□□ -0.74
Vcan-201ENSMUST00000109543 Wfdc17Q5SSJ1 76 aa10.42□□□□□ -0.74
Vcan-201ENSMUST00000109543 CnbpP53996 178 aaKnown RBP10.41□□□□□ -0.74
Vcan-201ENSMUST00000109543 AplnQ9R0R4 77 aa10.41□□□□□ -0.74
Vcan-201ENSMUST00000109543 Ube2d4D3YUH6 135 aa10.41□□□□□ -0.74
Vcan-201ENSMUST00000109543 Gm7102J3QQ10 178 aa10.41□□□□□ -0.74
Vcan-201ENSMUST00000109543 Rpl18aP62717 176 aaKnown RBP10.4□□□□□ -0.74
Vcan-201ENSMUST00000109543 Gm17509Q9CZ61 145 aa10.4□□□□□ -0.74
Vcan-201ENSMUST00000109543 ApcQ61315 2845 aa10.4□□□□□ -0.74
Vcan-201ENSMUST00000109543 6430550D23RikE9Q1X6 194 aa10.4□□□□□ -0.74
Vcan-201ENSMUST00000109543 A0A286YCN5 57 aa10.39□□□□□ -0.75
Vcan-201ENSMUST00000109543 Defa2P28309 93 aa10.39□□□□□ -0.75
Vcan-201ENSMUST00000109543 Atp5eP56382 52 aa10.39□□□□□ -0.75
Vcan-201ENSMUST00000109543 Cox7b2Q9D2H1 82 aa10.39□□□□□ -0.75
Vcan-201ENSMUST00000109543 FlnbQ80X90 2602 aaKnown RBP10.39□□□□□ -0.75
Vcan-201ENSMUST00000109543 Ifitm6A0A1B0GS75 124 aa10.39□□□□□ -0.75
Vcan-201ENSMUST00000109543 A730009L09RikA0A1B0GS82 72 aa10.39□□□□□ -0.75
Vcan-201ENSMUST00000109543 Igkv2-109A0A075B5K6 120 aa10.38□□□□□ -0.75
Vcan-201ENSMUST00000109543 Gm10320E9PW43 113 aa10.38□□□□□ -0.75
Vcan-201ENSMUST00000109543 Gm9805F6YK59 57 aa10.38□□□□□ -0.75
Vcan-201ENSMUST00000109543 MrapQ9D159 127 aa10.38□□□□□ -0.75
Vcan-201ENSMUST00000109543 PtprqP0C5E4 2300 aa10.37□□□□□ -0.75
Vcan-201ENSMUST00000109543 Hbb-b2P02089 147 aa10.37□□□□□ -0.75
Vcan-201ENSMUST00000109543 Ufsp1Q9CZP0 217 aa10.37□□□□□ -0.75
Vcan-201ENSMUST00000109543 Notch1Q01705 2531 aa10.36□□□□□ -0.75
Vcan-201ENSMUST00000109543 Igkv4-58A0A0G2JGI6 119 aa10.36□□□□□ -0.75
Vcan-201ENSMUST00000109543 Gm16181B0V2H2 73 aa10.36□□□□□ -0.75
Vcan-201ENSMUST00000109543 AY074887Q8R5F9 132 aa10.36□□□□□ -0.75
Vcan-201ENSMUST00000109543 Igkv4-92A0A0B4J1I2 117 aa10.36□□□□□ -0.75
Vcan-201ENSMUST00000109543 9430015G10RikA2ASP7 199 aa10.36□□□□□ -0.75
Vcan-201ENSMUST00000109543 Dnah3Q8BW94 4083 aa10.35□□□□□ -0.75
Vcan-201ENSMUST00000109543 Pcp4P63054 62 aa10.34□□□□□ -0.75
Vcan-201ENSMUST00000109543 Sslp1Q3UN54 99 aa10.33□□□□□ -0.76
Vcan-201ENSMUST00000109543 E130218I03RikA0A0U1RNU5 63 aa10.32□□□□□ -0.76
Vcan-201ENSMUST00000109543 Mrpl52Q9D0Y8 121 aa10.32□□□□□ -0.76
Vcan-201ENSMUST00000109543 Ighv10-1A0A0B4J1J6 119 aa10.32□□□□□ -0.76
Vcan-201ENSMUST00000109543 Camk2n2Q78WH7 79 aa10.32□□□□□ -0.76
Vcan-201ENSMUST00000109543 Gm10770F7D043 238 aa10.31□□□□□ -0.76
Vcan-201ENSMUST00000109543 Igkv1-88A0A140T8N1 120 aa10.3□□□□□ -0.76
Vcan-201ENSMUST00000109543 Gm17577J3QNF7 156 aa10.3□□□□□ -0.76
Vcan-201ENSMUST00000109543 Sprr4Q8CGN8 76 aa10.3□□□□□ -0.76
Vcan-201ENSMUST00000109543 Prr13Q9CQJ5 137 aa10.3□□□□□ -0.76
Vcan-201ENSMUST00000109543 4930519P11RikQ9CUJ8 166 aa10.29□□□□□ -0.76
Vcan-201ENSMUST00000109543 Q9DAA7 145 aa10.29□□□□□ -0.76
Vcan-201ENSMUST00000109543 Dnah10D3YYQ8 4591 aa10.29□□□□□ -0.76
Vcan-201ENSMUST00000109543 Ighv10-3A0A075B5T6 119 aa10.28□□□□□ -0.76
Vcan-201ENSMUST00000109543 Trav14-1A0A0G2JF94 121 aa10.28□□□□□ -0.76
Vcan-201ENSMUST00000109543 2310034G01RikA0A286YDL3 209 aa10.28□□□□□ -0.76
Vcan-201ENSMUST00000109543 Gm5617Q91VN2 117 aa10.27□□□□□ -0.77
Vcan-201ENSMUST00000109543 Msrb1Q9JLC3 116 aa10.27□□□□□ -0.77
Vcan-201ENSMUST00000109543 BB014433Q8C5R5 389 aa10.27□□□□□ -0.77
Vcan-201ENSMUST00000109543 Defb10Q8R2I8 73 aa10.27□□□□□ -0.77
Vcan-201ENSMUST00000109543 Col6a5A6H584 2640 aa10.26□□□□□ -0.77
Vcan-201ENSMUST00000109543 Cdk2ap2Q9CPY4 127 aa10.25□□□□□ -0.77
Vcan-201ENSMUST00000109543 Dnah14A0A140LIJ4 4489 aa10.25□□□□□ -0.77
Vcan-201ENSMUST00000109543 Dnah6E9Q0B6 4144 aa10.25□□□□□ -0.77
Vcan-201ENSMUST00000109543 Igkv8-26A0A075B5N5 123 aa10.25□□□□□ -0.77
Vcan-201ENSMUST00000109543 Gm16485Q8C4B7 115 aa10.25□□□□□ -0.77
Vcan-201ENSMUST00000109543 VwfQ8CIZ8 2813 aa10.23□□□□□ -0.77
Vcan-201ENSMUST00000109543 Igkv8-27A0A0G2JF28 120 aa10.23□□□□□ -0.77
Vcan-201ENSMUST00000109543 Igkv8-30A0A140T8M3 121 aa10.23□□□□□ -0.77
Vcan-201ENSMUST00000109543 Defa1P11477 93 aa10.23□□□□□ -0.77
Vcan-201ENSMUST00000109543 Cd164Q9R0L9 197 aa10.23□□□□□ -0.77
Vcan-201ENSMUST00000109543 Lamtor3O88653 124 aa10.22□□□□□ -0.77
Vcan-201ENSMUST00000109543 BC048502Q80Y74 154 aa10.22□□□□□ -0.77
Vcan-201ENSMUST00000109543 Spata3Q9D9T6 193 aa10.22□□□□□ -0.77
Vcan-201ENSMUST00000109543 Igf1P05017 153 aa10.22□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 99.6 ms