RNA–Protein interactions for RNA: ENSMUST00000071588.7

Nkx6-3-201, Transcript of Homeobox protein Nkx-6.3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx6-3, Length 2,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3-201ENSMUST00000071588 Trav9-4A0A0B4J1K2 113 aa9.48□□□□□ -0.89
Nkx6-3-201ENSMUST00000071588 Ucn2Q99ML8 113 aa9.48□□□□□ -0.89
Nkx6-3-201ENSMUST00000071588 Pfn2Q9JJV2 140 aa9.48□□□□□ -0.89
Nkx6-3-201ENSMUST00000071588 Xirp2Q4U4S6 3784 aa9.47□□□□□ -0.89
Nkx6-3-201ENSMUST00000071588 Igkv1-110A0A0B4J1I0 119 aa9.47□□□□□ -0.89
Nkx6-3-201ENSMUST00000071588 Gm3233E9Q2H5 230 aa9.47□□□□□ -0.89
Nkx6-3-201ENSMUST00000071588 Ighv1-59A0A0A6YXE0 117 aa9.46□□□□□ -0.89
Nkx6-3-201ENSMUST00000071588 Igkv4-68A0A0B4J1I7 117 aa9.46□□□□□ -0.89
Nkx6-3-201ENSMUST00000071588 E130114P18RikF6S0S7 154 aa9.46□□□□□ -0.89
Nkx6-3-201ENSMUST00000071588 Igkv1-99F6XWB2 120 aa9.46□□□□□ -0.89
Nkx6-3-201ENSMUST00000071588 Rnf152Q8BG47 203 aa9.46□□□□□ -0.89
Nkx6-3-201ENSMUST00000071588 Ubl5Q9EPV8 73 aa9.46□□□□□ -0.89
Nkx6-3-201ENSMUST00000071588 Ighv10-3A0A075B5T6 119 aa9.46□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 1810032O08RikE9PZV8 113 aa9.46□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 Gm9903Q8C9Y8 129 aa9.46□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 Ighv1-49A0A0A6YWX2 117 aa9.45□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 Gm9513B3GLJ6 99 aa9.45□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 Rbm3O89086 153 aaKnown RBP9.45□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 Defb50Q6TU36 73 aa9.45□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 A930002H24RikQ8C8Y3 163 aa9.45□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 Trav13n-2A0A0G2JF93 110 aa9.44□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 Gm5142Q8C5X9 133 aa9.44□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 Vpreb2P13373 142 aa9.44□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 Fam19a3Q7TPG6 132 aa9.44□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 Cdc42se2Q8BGH7 84 aa9.43□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 Bles03Q8VD62 251 aa9.43□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 UqcrqQ9CQ69 82 aa9.43□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 Rpl39lQ9CQD0 51 aa9.43□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 MplkipQ9D011 178 aa9.42□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 Itpr2Q9Z329 2701 aa9.42□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 AtrQ9JKK8 2635 aa9.42□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 Inafm2A0A1L1STD6 152 aa9.41□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 Reg3gO09049 174 aa9.41□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 Synj2bpQ9D6K5 145 aa9.41□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 Trbv13-2A0A140T8N6 113 aa9.41□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 CrygfQ9CXV3 174 aa9.41□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 Ighv2-9A0A075B5Q5 116 aa9.4□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 Ccdc179J3QM76 67 aa9.4□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 P01819 144 aa9.4□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 Plac8l1Q08EJ0 177 aa9.4□□□□□ -0.9
Nkx6-3-201ENSMUST00000071588 Defa28D3Z1V9 94 aa9.4□□□□□ -0.91
Nkx6-3-201ENSMUST00000071588 P01755 137 aa9.4□□□□□ -0.91
Nkx6-3-201ENSMUST00000071588 Trav13-4-dv7A0A075B6C2 110 aa9.39□□□□□ -0.91
Nkx6-3-201ENSMUST00000071588 Igkv8-27A0A0G2JF28 120 aa9.39□□□□□ -0.91
Nkx6-3-201ENSMUST00000071588 Igkv8-30A0A140T8M3 121 aa9.39□□□□□ -0.91
Nkx6-3-201ENSMUST00000071588 Krtap24-1G3X9A2 248 aa9.39□□□□□ -0.91
Nkx6-3-201ENSMUST00000071588 Odf3l2Q3TZ65 277 aa9.39□□□□□ -0.91
Nkx6-3-201ENSMUST00000071588 NipblQ6KCD5 2798 aaKnown RBP9.39□□□□□ -0.91
Nkx6-3-201ENSMUST00000071588 Ighv2-5A0A0A6YY69 116 aa9.37□□□□□ -0.91
Nkx6-3-201ENSMUST00000071588 Igkv4-53A0A0G2JFC6 119 aa9.37□□□□□ -0.91
Nkx6-3-201ENSMUST00000071588 Spint4Q9D263 159 aa9.37□□□□□ -0.91
Nkx6-3-201ENSMUST00000071588 Igkv2-109A0A075B5K6 120 aa9.37□□□□□ -0.91
Nkx6-3-201ENSMUST00000071588 B230359F08RikA0A0B4J1K3 109 aa9.37□□□□□ -0.91
Nkx6-3-201ENSMUST00000071588 Gm10401E9Q3K6 71 aa9.37□□□□□ -0.91
Nkx6-3-201ENSMUST00000071588 Zfand2aQ9JII7 171 aa9.37□□□□□ -0.91
Nkx6-3-201ENSMUST00000071588 Cd164Q9R0L9 197 aa9.37□□□□□ -0.91
Nkx6-3-201ENSMUST00000071588 Gm3443F7CCV5 94 aa9.36□□□□□ -0.91
Nkx6-3-201ENSMUST00000071588 Gm10570F6VB42 170 aa9.35□□□□□ -0.91
Nkx6-3-201ENSMUST00000071588 A830005F24RikQ8BRT5 167 aa9.35□□□□□ -0.91
Nkx6-3-201ENSMUST00000071588 Gm17689B3GLJ4 109 aa9.35□□□□□ -0.91
Nkx6-3-201ENSMUST00000071588 P01786 117 aa9.35□□□□□ -0.91
Nkx6-3-201ENSMUST00000071588 Spink8Q09TK9 105 aa9.35□□□□□ -0.91
Nkx6-3-201ENSMUST00000071588 Nsd1O88491 2588 aaKnown RBP9.34□□□□□ -0.91
Nkx6-3-201ENSMUST00000071588 Trav13-1A0A075B644 110 aa9.33□□□□□ -0.92
Nkx6-3-201ENSMUST00000071588 Trav9n-2A0A0G2JDP3 113 aa9.33□□□□□ -0.92
Nkx6-3-201ENSMUST00000071588 4930470P17RikQ9D542 155 aa9.33□□□□□ -0.92
Nkx6-3-201ENSMUST00000071588 Hivep1Q03172 2688 aa9.33□□□□□ -0.92
Nkx6-3-201ENSMUST00000071588 Ighv10-1A0A0B4J1J6 119 aa9.33□□□□□ -0.92
Nkx6-3-201ENSMUST00000071588 Igkv8-26A0A075B5N5 123 aa9.32□□□□□ -0.92
Nkx6-3-201ENSMUST00000071588 Prp2P05143 317 aa9.32□□□□□ -0.92
Nkx6-3-201ENSMUST00000071588 2310034G01RikA0A286YDL3 209 aa9.32□□□□□ -0.92
Nkx6-3-201ENSMUST00000071588 Tex15F8VPN2 2785 aa9.31□□□□□ -0.92
Nkx6-3-201ENSMUST00000071588 Gm10320E9PW43 113 aa9.31□□□□□ -0.92
Nkx6-3-201ENSMUST00000071588 Fam110dQ80X91 271 aa9.31□□□□□ -0.92
Nkx6-3-201ENSMUST00000071588 Spink1P09036 80 aa9.31□□□□□ -0.92
Nkx6-3-201ENSMUST00000071588 Gm815Q3UWS2 115 aa9.3□□□□□ -0.92
Nkx6-3-201ENSMUST00000071588 Fn1P11276 2477 aaKnown RBP9.3□□□□□ -0.92
Nkx6-3-201ENSMUST00000071588 C530025M09RikF6RGA8 229 aa9.29□□□□□ -0.92
Nkx6-3-201ENSMUST00000071588 Ufsp1Q9CZP0 217 aa9.29□□□□□ -0.92
Nkx6-3-201ENSMUST00000071588 Gm7075D3Z497 112 aa9.29□□□□□ -0.92
Nkx6-3-201ENSMUST00000071588 P06320 134 aa9.29□□□□□ -0.92
Nkx6-3-201ENSMUST00000071588 Higd2aQ9CQJ1 106 aa9.29□□□□□ -0.92
Nkx6-3-201ENSMUST00000071588 Q8BT88 171 aa9.28□□□□□ -0.92
Nkx6-3-201ENSMUST00000071588 P01738 130 aa9.28□□□□□ -0.92
Nkx6-3-201ENSMUST00000071588 Ly6c2P0CW03 131 aa9.28□□□□□ -0.92
Nkx6-3-201ENSMUST00000071588 MobpQ9D2P8 170 aa9.28□□□□□ -0.92
Nkx6-3-201ENSMUST00000071588 Igkv8-18A0A0B4J1J3 123 aa9.27□□□□□ -0.93
Nkx6-3-201ENSMUST00000071588 Tenm1Q9WTS4 2731 aa9.26□□□□□ -0.93
Nkx6-3-201ENSMUST00000071588 Ighv2-2A0A075B5P8 116 aa9.26□□□□□ -0.93
Nkx6-3-201ENSMUST00000071588 Igkv3-10A0A0G2JGN0 119 aa9.26□□□□□ -0.93
Nkx6-3-201ENSMUST00000071588 P01821 116 aa9.26□□□□□ -0.93
Nkx6-3-201ENSMUST00000071588 A730071L15RikQ8C4X0 137 aa9.26□□□□□ -0.93
Nkx6-3-201ENSMUST00000071588 Trav9d-3A0A075B695 113 aa9.25□□□□□ -0.93
Nkx6-3-201ENSMUST00000071588 Trav13d-4A0A0G2JFX3 110 aa9.25□□□□□ -0.93
Nkx6-3-201ENSMUST00000071588 E130218I03RikA0A0U1RNU5 63 aa9.25□□□□□ -0.93
Nkx6-3-201ENSMUST00000071588 Klk12B2RVZ0 247 aa9.25□□□□□ -0.93
Nkx6-3-201ENSMUST00000071588 Tcl1b3P56842 122 aa9.25□□□□□ -0.93
Nkx6-3-201ENSMUST00000071588 Q99M08 65 aa9.25□□□□□ -0.93
Nkx6-3-201ENSMUST00000071588 Nbeal2Q6ZQA0 2742 aa9.25□□□□□ -0.93
Nkx6-3-201ENSMUST00000071588 Trav9n-4A0A075B631 113 aa9.24□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 62.6 ms