RNA–Protein interactions for RNA: ENSMUST00000068992.7

Pcdh9-201, Transcript of Protocadherin 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pcdh9, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-201ENSMUST00000068992 Sec16aA2AIX1 2377 aa5.42□□□□□ -1.54
Pcdh9-201ENSMUST00000068992 Usp9yF8VPU6 2556 aa5.42□□□□□ -1.54
Pcdh9-201ENSMUST00000068992 Defb18Q30KP5 85 aa5.42□□□□□ -1.54
Pcdh9-201ENSMUST00000068992 Trav13d-4A0A0G2JFX3 110 aa5.41□□□□□ -1.54
Pcdh9-201ENSMUST00000068992 Krtap10-10A0A1W2P7T6 217 aa5.41□□□□□ -1.54
Pcdh9-201ENSMUST00000068992 Gm20726G3UX18 150 aa5.41□□□□□ -1.54
Pcdh9-201ENSMUST00000068992 Mrpl52Q9D0Y8 121 aa5.41□□□□□ -1.54
Pcdh9-201ENSMUST00000068992 Acyp1P56376 99 aa5.41□□□□□ -1.54
Pcdh9-201ENSMUST00000068992 Vpreb2P13373 142 aa5.4□□□□□ -1.54
Pcdh9-201ENSMUST00000068992 Nav3Q80TN7 2359 aa5.4□□□□□ -1.54
Pcdh9-201ENSMUST00000068992 CirbpP60824 172 aaKnown RBP5.4□□□□□ -1.54
Pcdh9-201ENSMUST00000068992 H2al1aQ5M8Q2 105 aa5.4□□□□□ -1.54
Pcdh9-201ENSMUST00000068992 Tmem223Q9CQE2 199 aaKnown RBP5.4□□□□□ -1.54
Pcdh9-201ENSMUST00000068992 Naa38Q9D2U5 125 aa5.4□□□□□ -1.54
Pcdh9-201ENSMUST00000068992 Serp2Q6TAW2 65 aa5.4□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Fam19a3Q7TPG6 132 aa5.4□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Q8BT88 171 aa5.4□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Nop10Q9CQS2 64 aa5.4□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Trav13n-2A0A0G2JF93 110 aa5.39□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Tmem86bQ497J1 226 aa5.39□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Il19Q8CJ70 176 aa5.39□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Trav9d-3A0A075B695 113 aa5.39□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Igkv8-28A0A0G2JE47 121 aa5.39□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Trbv30A0A0B4J1P1 111 aa5.39□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Gm5617Q91VN2 117 aa5.39□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Avpi1Q9D7H4 142 aa5.39□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Phpt1Q9DAK9 124 aa5.39□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Trav13-1A0A075B644 110 aa5.38□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Defb29Q8BGW9 78 aa5.38□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Hivep1Q03172 2688 aa5.38□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Defa25Q5G864 92 aa5.38□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Gm10271F6WY25 52 aa5.38□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 CrygeQ03740 174 aa5.38□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Rpl39lQ9CQD0 51 aa5.38□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Msrb1Q9JLC3 116 aa5.38□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Bahcc1Q3UHR0 2643 aa5.37□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 E130114P18RikF6S0S7 154 aa5.37□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Krtap24-1G3X9A2 248 aa5.37□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Spink1P09036 80 aa5.37□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Cox7a1P56392 80 aa5.37□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 A330070K13RikQ8CA53 115 aa5.37□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Ndufa12Q7TMF3 145 aaKnown RBP5.37□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Lrp1bQ9JI18 4599 aa5.36□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Cox6cQ9CPQ1 76 aa5.36□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Lyrm7Q9DA03 104 aa5.36□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Hivep2Q3UHF7 2430 aa5.36□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Ptpn13Q64512 2453 aa5.36□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Ighv2-5A0A0A6YY69 116 aa5.36□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Defa16P50714 93 aa5.36□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Gm37013Q8K491 104 aa5.36□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Gm19935A0A1B0GSF9 52 aa5.36□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Tmem258P61166 79 aa5.36□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Srrm2Q8BTI8 2703 aaKnown RBP5.35□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 2310034G01RikA0A286YDL3 209 aa5.35□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 EnhoQ8K1D8 76 aa5.35□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Pfn2Q9JJV2 140 aa5.35□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Setd2E9Q5F9 2537 aa5.35□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Igkv1-88A0A140T8N1 120 aa5.35□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Gm3250E9Q1M3 230 aa5.35□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Xcl1P47993 114 aa5.35□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Ighv13-2A0A0A6YWN3 119 aa5.35□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Fam19a5Q91WE9 132 aa5.35□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Igkv8-18A0A0B4J1J3 123 aa5.34□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Igkv4-58A0A0G2JGI6 119 aa5.34□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Gm7849D3YX03 116 aa5.34□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 MifP34884 115 aaKnown RBP5.34□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Ccl21aP84444 133 aa5.34□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Ccl21bP86792 133 aa5.34□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Ccl21cP86793 133 aa5.34□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Higd2aQ9CQJ1 106 aa5.34□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Defa1P11477 93 aa5.34□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Armcx4E9PWM3 2356 aa5.34□□□□□ -1.55
Pcdh9-201ENSMUST00000068992 Igkv8-34A0A0G2JDU0 121 aa5.34□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 Gm16181B0V2H2 73 aa5.32□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 Rpl36aP83882 106 aaKnown RBP5.32□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 SacsQ9JLC8 4582 aa5.31□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 Cox7bP56393 80 aa5.31□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 Wfdc12Q9JHY3 85 aa5.31□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 Dynlrb2Q9DAJ5 96 aa5.31□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 Trbv13-2A0A140T8N6 113 aa5.3□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 Gm7257D3YX25 99 aa5.3□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 Gm7276Q3TYW4 209 aa5.3□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 SnurfQ9WU12 71 aa5.3□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 Defa2P28309 93 aa5.3□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 Defb37Q7TMD2 62 aa5.3□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 Elof1P60003 83 aa5.29□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 Ly6c2P0CW03 131 aa5.29□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 Sprr1aQ62266 144 aa5.29□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 4930556J24RikQ9D4U7 146 aa5.29□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 Igkv2-109A0A075B5K6 120 aa5.28□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 Trav9n-4A0A075B631 113 aa5.28□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 Gm9767G3X930 207 aa5.28□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 Ighv2-2A0A075B5P8 116 aa5.28□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 P01821 116 aa5.28□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 Tmem254aP0DN89 123 aa5.28□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 Tmem254bP0DN90 123 aa5.28□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 Tmem254cP0DN91 123 aa5.28□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 Defa4P28311 92 aa5.28□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 C2cd3Q52KB6 2323 aa5.28□□□□□ -1.56
Pcdh9-201ENSMUST00000068992 Gm7102J3QQ10 178 aa5.28□□□□□ -1.56
Retrieved 100 of 22,080 RNA–protein pairs in 47.6 ms