RNA–Protein interactions for RNA: ENSMUST00000065005.4

Atg4d-201, Transcript of Cysteine protease ATG4D, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Atg4d, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4d-201ENSMUST00000065005 Zfyve26Q5DU37 2529 aa10.62□□□□□ -0.71
Atg4d-201ENSMUST00000065005 SnurfQ9WU12 71 aa10.61□□□□□ -0.71
Atg4d-201ENSMUST00000065005 Mrpl34Q99N91 92 aa10.61□□□□□ -0.71
Atg4d-201ENSMUST00000065005 Chchd10Q7TNL9 138 aa10.61□□□□□ -0.71
Atg4d-201ENSMUST00000065005 AI606181Q8C7B9 129 aa10.61□□□□□ -0.71
Atg4d-201ENSMUST00000065005 BC025920Q3US60 128 aa10.61□□□□□ -0.71
Atg4d-201ENSMUST00000065005 Gm16181B0V2H2 73 aa10.6□□□□□ -0.71
Atg4d-201ENSMUST00000065005 Cox6a2P43023 97 aa10.6□□□□□ -0.71
Atg4d-201ENSMUST00000065005 Fam19a3Q7TPG6 132 aa10.6□□□□□ -0.71
Atg4d-201ENSMUST00000065005 Gm9903Q8C9Y8 129 aa10.59□□□□□ -0.71
Atg4d-201ENSMUST00000065005 Spink13Q3UTS8 97 aa10.59□□□□□ -0.71
Atg4d-201ENSMUST00000065005 Msrb1Q9JLC3 116 aa10.58□□□□□ -0.72
Atg4d-201ENSMUST00000065005 2310034G01RikA0A286YDL3 209 aa10.58□□□□□ -0.72
Atg4d-201ENSMUST00000065005 PtprbB2RU80 1998 aa10.57□□□□□ -0.72
Atg4d-201ENSMUST00000065005 RetnlbQ99P86 105 aa10.57□□□□□ -0.72
Atg4d-201ENSMUST00000065005 Col4a2P08122 1707 aa10.57□□□□□ -0.72
Atg4d-201ENSMUST00000065005 Gm43218A0A0G2JGT0 114 aa10.57□□□□□ -0.72
Atg4d-201ENSMUST00000065005 Defb50Q6TU36 73 aa10.57□□□□□ -0.72
Atg4d-201ENSMUST00000065005 Abca2P41234 2434 aa10.56□□□□□ -0.72
Atg4d-201ENSMUST00000065005 Znf580Q9DB38 172 aa10.56□□□□□ -0.72
Atg4d-201ENSMUST00000065005 E130208F15RikQ3UPV3 143 aa10.56□□□□□ -0.72
Atg4d-201ENSMUST00000065005 Rif1Q6PR54 2419 aaKnown RBP10.55□□□□□ -0.72
Atg4d-201ENSMUST00000065005 Gm12216A0A1W2P827 62 aa10.55□□□□□ -0.72
Atg4d-201ENSMUST00000065005 Gm10999F6Q4M4 69 aa10.55□□□□□ -0.72
Atg4d-201ENSMUST00000065005 Gm11627A6PWP4 55 aa10.54□□□□□ -0.72
Atg4d-201ENSMUST00000065005 Lrp4Q8VI56 1905 aa10.54□□□□□ -0.72
Atg4d-201ENSMUST00000065005 Pkd1l2Q7TN88 2461 aa10.53□□□□□ -0.72
Atg4d-201ENSMUST00000065005 Phf5aP83870 110 aaKnown RBP10.53□□□□□ -0.72
Atg4d-201ENSMUST00000065005 Col27a1Q5QNQ9 1845 aa10.53□□□□□ -0.72
Atg4d-201ENSMUST00000065005 Znf414Q9DCK4 299 aa10.52□□□□□ -0.72
Atg4d-201ENSMUST00000065005 Gpr15lA0A0B4J1N3 78 aa10.52□□□□□ -0.73
Atg4d-201ENSMUST00000065005 6430550D23RikE9Q1X6 194 aa10.51□□□□□ -0.73
Atg4d-201ENSMUST00000065005 Gm10160F6Y577 67 aa10.51□□□□□ -0.73
Atg4d-201ENSMUST00000065005 Lrrk2Q5S006 2527 aa10.5□□□□□ -0.73
Atg4d-201ENSMUST00000065005 Dmac1Q9CQ00 111 aa10.5□□□□□ -0.73
Atg4d-201ENSMUST00000065005 Krtap24-1G3X9A2 248 aa10.5□□□□□ -0.73
Atg4d-201ENSMUST00000065005 P01819 144 aa10.5□□□□□ -0.73
Atg4d-201ENSMUST00000065005 Snhg11Q4G0K9 87 aa10.49□□□□□ -0.73
Atg4d-201ENSMUST00000065005 Coa6Q8BGD8 79 aa10.49□□□□□ -0.73
Atg4d-201ENSMUST00000065005 3110070M22RikQ9DAQ7 118 aa10.49□□□□□ -0.73
Atg4d-201ENSMUST00000065005 Ighv2-5A0A0A6YY69 116 aa10.49□□□□□ -0.73
Atg4d-201ENSMUST00000065005 Alms1Q8K4E0 3251 aa10.49□□□□□ -0.73
Atg4d-201ENSMUST00000065005 A930002H24RikQ8C8Y3 163 aa10.49□□□□□ -0.73
Atg4d-201ENSMUST00000065005 Gm21886J3QJU9 214 aa10.48□□□□□ -0.73
Atg4d-201ENSMUST00000065005 Gm3250E9Q1M3 230 aa10.48□□□□□ -0.73
Atg4d-201ENSMUST00000065005 Spaca4Q80ZQ0 127 aa10.48□□□□□ -0.73
Atg4d-201ENSMUST00000065005 Defb45Q3V490 66 aa10.47□□□□□ -0.73
Atg4d-201ENSMUST00000065005 CrygaP04345 174 aa10.46□□□□□ -0.73
Atg4d-201ENSMUST00000065005 Crip3Q6Q6R3 243 aa10.46□□□□□ -0.73
Atg4d-201ENSMUST00000065005 Spata3Q9D9T6 193 aa10.46□□□□□ -0.73
Atg4d-201ENSMUST00000065005 Flg2Q2VIS4 2362 aa10.46□□□□□ -0.74
Atg4d-201ENSMUST00000065005 Notch2O35516 2470 aa10.46□□□□□ -0.74
Atg4d-201ENSMUST00000065005 Gm10197F6QEY5 67 aa10.45□□□□□ -0.74
Atg4d-201ENSMUST00000065005 Igkv8-27A0A0G2JF28 120 aa10.44□□□□□ -0.74
Atg4d-201ENSMUST00000065005 1810062G17RikG3X8Y2 129 aa10.44□□□□□ -0.74
Atg4d-201ENSMUST00000065005 Gm44790A0A0N4SV91 103 aa10.44□□□□□ -0.74
Atg4d-201ENSMUST00000065005 MobpQ9D2P8 170 aa10.44□□□□□ -0.74
Atg4d-201ENSMUST00000065005 4930518I15RikQ3V2W7 57 aa10.43□□□□□ -0.74
Atg4d-201ENSMUST00000065005 Prol1E9PYQ4 312 aa10.43□□□□□ -0.74
Atg4d-201ENSMUST00000065005 Elof1P60003 83 aa10.43□□□□□ -0.74
Atg4d-201ENSMUST00000065005 Csdc2Q91YQ3 154 aa10.41□□□□□ -0.74
Atg4d-201ENSMUST00000065005 Gm5617Q91VN2 117 aa10.41□□□□□ -0.74
Atg4d-201ENSMUST00000065005 Gm10837Q3UTT8 145 aa10.4□□□□□ -0.74
Atg4d-201ENSMUST00000065005 Defb1P56386 69 aa10.4□□□□□ -0.75
Atg4d-201ENSMUST00000065005 Spint4Q9D263 159 aa10.39□□□□□ -0.75
Atg4d-201ENSMUST00000065005 Col5a1O88207 1838 aa10.37□□□□□ -0.75
Atg4d-201ENSMUST00000065005 Rpl37aP61514 92 aa10.37□□□□□ -0.75
Atg4d-201ENSMUST00000065005 Q8BGJ3 129 aa10.37□□□□□ -0.75
Atg4d-201ENSMUST00000065005 4930507D05RikQ8C9C9 103 aa10.36□□□□□ -0.75
Atg4d-201ENSMUST00000065005 Sostdc1Q9CQN4 206 aa10.36□□□□□ -0.75
Atg4d-201ENSMUST00000065005 Cdip1Q9DB75 208 aa10.36□□□□□ -0.75
Atg4d-201ENSMUST00000065005 Ttc28Q80XJ3 2450 aa10.36□□□□□ -0.75
Atg4d-201ENSMUST00000065005 Smr3aQ61900 147 aa10.36□□□□□ -0.75
Atg4d-201ENSMUST00000065005 AplnQ9R0R4 77 aa10.35□□□□□ -0.75
Atg4d-201ENSMUST00000065005 Nav3Q80TN7 2359 aa10.34□□□□□ -0.75
Atg4d-201ENSMUST00000065005 Ighv2-2A0A075B5P8 116 aa10.33□□□□□ -0.76
Atg4d-201ENSMUST00000065005 P01821 116 aa10.33□□□□□ -0.76
Atg4d-201ENSMUST00000065005 Gm27235Q3UW50 83 aa10.33□□□□□ -0.76
Atg4d-201ENSMUST00000065005 Gm10770F7D043 238 aa10.33□□□□□ -0.76
Atg4d-201ENSMUST00000065005 Gm26661M0QWV4 156 aa10.32□□□□□ -0.76
Atg4d-201ENSMUST00000065005 Gm17689B3GLJ4 109 aa10.31□□□□□ -0.76
Atg4d-201ENSMUST00000065005 Gm20661K7N787 53 aa10.31□□□□□ -0.76
Atg4d-201ENSMUST00000065005 Fam168bQ80XQ8 194 aa10.3□□□□□ -0.76
Atg4d-201ENSMUST00000065005 Q8BT88 171 aa10.28□□□□□ -0.76
Atg4d-201ENSMUST00000065005 Limd2Q8BGB5 128 aa10.27□□□□□ -0.77
Atg4d-201ENSMUST00000065005 Gm10772F7AIG4 85 aa10.26□□□□□ -0.77
Atg4d-201ENSMUST00000065005 Piezo1E2JF22 2547 aa10.26□□□□□ -0.77
Atg4d-201ENSMUST00000065005 Ankhd1E9PUR0 2548 aaKnown RBP10.26□□□□□ -0.77
Atg4d-201ENSMUST00000065005 Mp68P56379 58 aa10.24□□□□□ -0.77
Atg4d-201ENSMUST00000065005 AI854703Q8BIN3 203 aa10.22□□□□□ -0.77
Atg4d-201ENSMUST00000065005 A530084C06RikQ3UTW2 186 aa10.21□□□□□ -0.78
Atg4d-201ENSMUST00000065005 Krtap11-1E9Q2E9 183 aa10.2□□□□□ -0.78
Atg4d-201ENSMUST00000065005 Psors1c2Q80ZC9 134 aa10.2□□□□□ -0.78
Atg4d-201ENSMUST00000065005 Sptbn4E9PX29 2561 aa10.2□□□□□ -0.78
Atg4d-201ENSMUST00000065005 Chd8Q09XV5 2582 aaKnown RBP10.19□□□□□ -0.78
Atg4d-201ENSMUST00000065005 Tln1P26039 2541 aaKnown RBP10.18□□□□□ -0.78
Atg4d-201ENSMUST00000065005 7530416G11RikJ3QJX6 159 aa10.17□□□□□ -0.78
Atg4d-201ENSMUST00000065005 Krtap26-1Q9D7N2 215 aa10.16□□□□□ -0.78
Atg4d-201ENSMUST00000065005 Krtap16-1A2A5X5 502 aa10.15□□□□□ -0.78
Atg4d-201ENSMUST00000065005 PtprqP0C5E4 2300 aa10.12□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 57.3 ms