RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 Gm10065F6TJM2 114 aa13.38□□□□□ -0.27
Ssbp4-201ENSMUST00000049908 BB014433Q8C5R5 389 aa13.37□□□□□ -0.27
Ssbp4-201ENSMUST00000049908 Gnb1lQ9EQ15 326 aa13.37□□□□□ -0.27
Ssbp4-201ENSMUST00000049908 Hsbp1l1B2RXB2 72 aa13.36□□□□□ -0.27
Ssbp4-201ENSMUST00000049908 Gm42674D3YUT9 64 aa13.36□□□□□ -0.27
Ssbp4-201ENSMUST00000049908 C530025M09RikF6RGA8 229 aa13.36□□□□□ -0.27
Ssbp4-201ENSMUST00000049908 P01755 137 aa13.36□□□□□ -0.27
Ssbp4-201ENSMUST00000049908 9430015G10RikA2ASP7 199 aa13.36□□□□□ -0.27
Ssbp4-201ENSMUST00000049908 Dppa2Q9CWH0 301 aa13.36□□□□□ -0.27
Ssbp4-201ENSMUST00000049908 Smim13E9Q942 88 aa13.34□□□□□ -0.27
Ssbp4-201ENSMUST00000049908 4930432M17RikQ3V0W9 174 aa13.33□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 Mzt1Q8BUR9 78 aa13.33□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 Lce1mQ9CR91 182 aa13.33□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 2310009B15RikA0A0A6YWI4 143 aa13.32□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 Iglc1A0A0G2JE99 106 aa13.32□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 Mc5rP41149 325 aa13.32□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 SrarpQ3ULG3 163 aa13.32□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 Gm867A0A1W2P7T4 151 aa13.31□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 Gm17577J3QNF7 156 aa13.31□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 BtcQ05928 177 aa13.31□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 Pkhd1l1Q80ZA4 4249 aa13.31□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 Trav14-1A0A0G2JF94 121 aa13.3□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 Krtap29-1A2A5X4 342 aa13.3□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 Rmi2Q3UPE3 149 aa13.3□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 SycnQ8VCK7 134 aa13.3□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 Erg28Q9ERY9 140 aa13.3□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 B230359F08RikA0A0B4J1K3 109 aa13.29□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 Gpr15lA0A0B4J1N3 78 aa13.29□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 BC107364E9Q5A2 140 aa13.29□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 Smim1P0C8K7 78 aa13.29□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 4930442H23RikQ9D5G7 103 aa13.29□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 Morn5Q9DAI9 170 aa13.29□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 Plac1Q9JI83 173 aa13.29□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 Trav9d-4A0A0G2JG37 103 aa13.29□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 A0A286YCN5 57 aa13.29□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 Cox7cP17665 63 aa13.29□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 Gm11627A6PWP4 55 aa13.28□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 Gm6812B1AXU1 112 aa13.28□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 PkigO70139 76 aa13.28□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 Vamp8O70404 101 aa13.28□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 Gm10295Q8CCF3 114 aa13.28□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 Znf414Q9DCK4 299 aa13.28□□□□□ -0.28
Ssbp4-201ENSMUST00000049908 Trav4n-4A0A075B615 110 aa13.27□□□□□ -0.29
Ssbp4-201ENSMUST00000049908 Lect2O88803 151 aa13.27□□□□□ -0.29
Ssbp4-201ENSMUST00000049908 Tcl1b5P56845 121 aa13.27□□□□□ -0.29
Ssbp4-201ENSMUST00000049908 Ufsp1Q9CZP0 217 aa13.27□□□□□ -0.29
Ssbp4-201ENSMUST00000049908 4930544G11RikQ9CR99 193 aa13.26□□□□□ -0.29
Ssbp4-201ENSMUST00000049908 Trav4-3A0A0B4J1K1 110 aa13.25□□□□□ -0.29
Ssbp4-201ENSMUST00000049908 Gm35549A0A0N4SUS7 141 aa13.25□□□□□ -0.29
Ssbp4-201ENSMUST00000049908 Hbb-b2P02089 147 aa13.25□□□□□ -0.29
Ssbp4-201ENSMUST00000049908 Gm9903Q8C9Y8 129 aa13.25□□□□□ -0.29
Ssbp4-201ENSMUST00000049908 Igkv8-16A0A0G2JDG9 121 aa13.24□□□□□ -0.29
Ssbp4-201ENSMUST00000049908 Pou2af1Q64693 256 aa13.23□□□□□ -0.29
Ssbp4-201ENSMUST00000049908 Plscr4P58196 326 aa13.23□□□□□ -0.29
Ssbp4-201ENSMUST00000049908 G0s2Q61585 103 aa13.23□□□□□ -0.29
Ssbp4-201ENSMUST00000049908 Wfdc12Q9JHY3 85 aa13.23□□□□□ -0.29
Ssbp4-201ENSMUST00000049908 Dnhd1D3Z2X2 4750 aa13.22□□□□□ -0.29
Ssbp4-201ENSMUST00000049908 Gm44965A0A0N4SVR3 59 aa13.22□□□□□ -0.29
Ssbp4-201ENSMUST00000049908 Defb45Q3V490 66 aa13.22□□□□□ -0.29
Ssbp4-201ENSMUST00000049908 Abca13Q5SSE9 5034 aa13.21□□□□□ -0.29
Ssbp4-201ENSMUST00000049908 Gm45753A0A1C7CYU8 86 aa13.21□□□□□ -0.3
Ssbp4-201ENSMUST00000049908 Gm26727M0QWT1 121 aa13.2□□□□□ -0.3
Ssbp4-201ENSMUST00000049908 Defa23Q5G866 93 aa13.2□□□□□ -0.3
Ssbp4-201ENSMUST00000049908 Trav13-2A0A075B649 110 aa13.18□□□□□ -0.3
Ssbp4-201ENSMUST00000049908 Vps25Q9CQ80 176 aa13.18□□□□□ -0.3
Ssbp4-201ENSMUST00000049908 Dpm2Q9Z324 84 aa13.18□□□□□ -0.3
Ssbp4-201ENSMUST00000049908 1700011M02RikB1AX35 88 aa13.17□□□□□ -0.3
Ssbp4-201ENSMUST00000049908 MifP34884 115 aaKnown RBP13.17□□□□□ -0.3
Ssbp4-201ENSMUST00000049908 Triap1Q9D8Z2 76 aa13.17□□□□□ -0.3
Ssbp4-201ENSMUST00000049908 Gm28269A0A087WSG3 125 aa13.16□□□□□ -0.3
Ssbp4-201ENSMUST00000049908 Vpreb2P13373 142 aa13.16□□□□□ -0.3
Ssbp4-201ENSMUST00000049908 Gm29289A0A087WPY7 166 aa13.16□□□□□ -0.3
Ssbp4-201ENSMUST00000049908 Gm10518F6UQQ9 182 aa13.16□□□□□ -0.3
Ssbp4-201ENSMUST00000049908 Gm26602M0QWA4 95 aa13.16□□□□□ -0.3
Ssbp4-201ENSMUST00000049908 Krtap19-5O08632 62 aa13.16□□□□□ -0.3
Ssbp4-201ENSMUST00000049908 Zcchc13Q9D548 170 aa13.16□□□□□ -0.3
Ssbp4-201ENSMUST00000049908 1700010B08RikQ9DAI7 102 aa13.16□□□□□ -0.3
Ssbp4-201ENSMUST00000049908 Fat3Q8BNA6 4555 aa13.15□□□□□ -0.3
Ssbp4-201ENSMUST00000049908 Gm45213A0A0U1RNZ6 101 aa13.14□□□□□ -0.31
Ssbp4-201ENSMUST00000049908 Defa27F2Z403 93 aa13.14□□□□□ -0.31
Ssbp4-201ENSMUST00000049908 Pfn2Q9JJV2 140 aa13.14□□□□□ -0.31
Ssbp4-201ENSMUST00000049908 HydinQ80W93 5154 aa13.13□□□□□ -0.31
Ssbp4-201ENSMUST00000049908 PcloQ9QYX7 5068 aa13.12□□□□□ -0.31
Ssbp4-201ENSMUST00000049908 Wfdc6bF6ULY1 148 aa13.12□□□□□ -0.31
Ssbp4-201ENSMUST00000049908 Pxt1Q8K459 51 aa13.12□□□□□ -0.31
Ssbp4-201ENSMUST00000049908 Reg3dQ9QUS9 175 aa13.12□□□□□ -0.31
Ssbp4-201ENSMUST00000049908 Ntn5Q3UQ22 452 aa13.11□□□□□ -0.31
Ssbp4-201ENSMUST00000049908 Fam168bQ80XQ8 194 aa13.11□□□□□ -0.31
Ssbp4-201ENSMUST00000049908 P01843 105 aa13.1□□□□□ -0.31
Ssbp4-201ENSMUST00000049908 Hectd4E9Q2E4 4418 aa13.1□□□□□ -0.31
Ssbp4-201ENSMUST00000049908 Ube2d4D3YUH6 135 aa13.1□□□□□ -0.31
Ssbp4-201ENSMUST00000049908 Sostdc1Q9CQN4 206 aa13.1□□□□□ -0.31
Ssbp4-201ENSMUST00000049908 Lrp1bQ9JI18 4599 aa13.1□□□□□ -0.31
Ssbp4-201ENSMUST00000049908 Mtatp8P03930 67 aa13.09□□□□□ -0.31
Ssbp4-201ENSMUST00000049908 Timm17bQ9Z0V7 172 aa13.09□□□□□ -0.31
Ssbp4-201ENSMUST00000049908 Mycbp2Q7TPH6 4711 aa13.08□□□□□ -0.32
Ssbp4-201ENSMUST00000049908 Rpl37aP61514 92 aa13.08□□□□□ -0.32
Ssbp4-201ENSMUST00000049908 Fam19a1Q7TPG8 133 aa13.08□□□□□ -0.32
Ssbp4-201ENSMUST00000049908 Fam19a5Q91WE9 132 aa13.08□□□□□ -0.32
Ssbp4-201ENSMUST00000049908 RetnlbQ99P86 105 aa13.08□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 103 ms