RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 NipblQ6KCD5 2798 aaKnown RBP10.55□□□□□ -0.72
Usp4-201ENSMUST00000035237 Igkv3-1A0A075B5P1 119 aa10.55□□□□□ -0.72
Usp4-201ENSMUST00000035237 Defb50Q6TU36 73 aa10.55□□□□□ -0.72
Usp4-201ENSMUST00000035237 Usp9yF8VPU6 2556 aa10.55□□□□□ -0.72
Usp4-201ENSMUST00000035237 Unc79Q0KK59 2596 aa10.55□□□□□ -0.72
Usp4-201ENSMUST00000035237 A0A286YCN5 57 aa10.54□□□□□ -0.72
Usp4-201ENSMUST00000035237 Gm19935A0A1B0GSF9 52 aa10.54□□□□□ -0.72
Usp4-201ENSMUST00000035237 Gm10772F7AIG4 85 aa10.54□□□□□ -0.72
Usp4-201ENSMUST00000035237 1810062G17RikG3X8Y2 129 aa10.54□□□□□ -0.72
Usp4-201ENSMUST00000035237 Cystm1Q8K353 104 aa10.54□□□□□ -0.72
Usp4-201ENSMUST00000035237 CrygdP04342 174 aa10.54□□□□□ -0.72
Usp4-201ENSMUST00000035237 Cdk2ap2Q9CPY4 127 aa10.54□□□□□ -0.72
Usp4-201ENSMUST00000035237 PtprqP0C5E4 2300 aa10.54□□□□□ -0.72
Usp4-201ENSMUST00000035237 LrbaQ9ESE1 2856 aa10.54□□□□□ -0.72
Usp4-201ENSMUST00000035237 Ighv2-9-1A0A075B697 116 aa10.53□□□□□ -0.72
Usp4-201ENSMUST00000035237 Ighv13-2A0A0A6YWN3 119 aa10.53□□□□□ -0.72
Usp4-201ENSMUST00000035237 Gm9805F6YK59 57 aa10.53□□□□□ -0.72
Usp4-201ENSMUST00000035237 Q9DAA7 145 aa10.53□□□□□ -0.72
Usp4-201ENSMUST00000035237 Rnf152Q8BG47 203 aa10.53□□□□□ -0.72
Usp4-201ENSMUST00000035237 Srsf12Q8C8K3 266 aa10.53□□□□□ -0.72
Usp4-201ENSMUST00000035237 Igkv4-72A0A0B4J1I4 117 aa10.52□□□□□ -0.72
Usp4-201ENSMUST00000035237 Gm5153P01627 120 aa10.52□□□□□ -0.73
Usp4-201ENSMUST00000035237 Higd2aQ9CQJ1 106 aa10.52□□□□□ -0.73
Usp4-201ENSMUST00000035237 Igkv1-122A0A140T8M9 119 aa10.52□□□□□ -0.73
Usp4-201ENSMUST00000035237 Dad1P61804 113 aa10.51□□□□□ -0.73
Usp4-201ENSMUST00000035237 Igkv4-54A0A0G2JES9 117 aa10.51□□□□□ -0.73
Usp4-201ENSMUST00000035237 Ankrd17Q99NH0 2603 aaKnown RBP10.51□□□□□ -0.73
Usp4-201ENSMUST00000035237 Ntn5Q3UQ22 452 aa10.5□□□□□ -0.73
Usp4-201ENSMUST00000035237 Lypd5Q9D7Z7 256 aa10.5□□□□□ -0.73
Usp4-201ENSMUST00000035237 Vpreb1P13372 142 aa10.49□□□□□ -0.73
Usp4-201ENSMUST00000035237 Celsr2Q9R0M0 2920 aa10.49□□□□□ -0.73
Usp4-201ENSMUST00000035237 Muc2Q80Z19 2680 aa10.49□□□□□ -0.73
Usp4-201ENSMUST00000035237 Ly6c2P0CW03 131 aa10.48□□□□□ -0.73
Usp4-201ENSMUST00000035237 Gpha2Q925Q5 128 aa10.48□□□□□ -0.73
Usp4-201ENSMUST00000035237 Ighv10-3A0A075B5T6 119 aa10.47□□□□□ -0.73
Usp4-201ENSMUST00000035237 Sfta2E9PXB6 77 aa10.47□□□□□ -0.73
Usp4-201ENSMUST00000035237 Fam19a3Q7TPG6 132 aa10.46□□□□□ -0.73
Usp4-201ENSMUST00000035237 Igkv8-27A0A0G2JF28 120 aa10.46□□□□□ -0.73
Usp4-201ENSMUST00000035237 Igkv8-30A0A140T8M3 121 aa10.46□□□□□ -0.73
Usp4-201ENSMUST00000035237 Igkv8-21A0A140T8P7 120 aa10.46□□□□□ -0.73
Usp4-201ENSMUST00000035237 Rps28P62858 69 aaKnown RBP10.46□□□□□ -0.73
Usp4-201ENSMUST00000035237 Odf3l2Q3TZ65 277 aa10.46□□□□□ -0.73
Usp4-201ENSMUST00000035237 Ighv1-59A0A0A6YXE0 117 aa10.46□□□□□ -0.74
Usp4-201ENSMUST00000035237 Cd99Q8VCN6 175 aa10.46□□□□□ -0.74
Usp4-201ENSMUST00000035237 Mrpl52Q9D0Y8 121 aa10.45□□□□□ -0.74
Usp4-201ENSMUST00000035237 9530003J23RikQ8BM26 151 aa10.45□□□□□ -0.74
Usp4-201ENSMUST00000035237 Gm9903Q8C9Y8 129 aa10.45□□□□□ -0.74
Usp4-201ENSMUST00000035237 Fam229bQ8CF36 80 aa10.45□□□□□ -0.74
Usp4-201ENSMUST00000035237 Ighv10-1A0A0B4J1J6 119 aa10.44□□□□□ -0.74
Usp4-201ENSMUST00000035237 Tcl1b3P56842 122 aa10.44□□□□□ -0.74
Usp4-201ENSMUST00000035237 Defb12Q8K4N3 78 aa10.44□□□□□ -0.74
Usp4-201ENSMUST00000035237 Ufsp1Q9CZP0 217 aa10.44□□□□□ -0.74
Usp4-201ENSMUST00000035237 A0A286YE02 88 aa10.44□□□□□ -0.74
Usp4-201ENSMUST00000035237 Krtap16-1A2A5X5 502 aa10.43□□□□□ -0.74
Usp4-201ENSMUST00000035237 Spink4O35679 86 aa10.43□□□□□ -0.74
Usp4-201ENSMUST00000035237 Hectd1Q69ZR2 2618 aaKnown RBP10.43□□□□□ -0.74
Usp4-201ENSMUST00000035237 Znf414Q9DCK4 299 aa10.43□□□□□ -0.74
Usp4-201ENSMUST00000035237 Gm17577J3QNF7 156 aa10.41□□□□□ -0.74
Usp4-201ENSMUST00000035237 Spink8Q09TK9 105 aa10.41□□□□□ -0.74
Usp4-201ENSMUST00000035237 Gm17689B3GLJ4 109 aa10.4□□□□□ -0.74
Usp4-201ENSMUST00000035237 Defb37Q7TMD2 62 aa10.4□□□□□ -0.74
Usp4-201ENSMUST00000035237 PolqQ8CGS6 2544 aa10.4□□□□□ -0.75
Usp4-201ENSMUST00000035237 BC048502Q80Y74 154 aa10.39□□□□□ -0.75
Usp4-201ENSMUST00000035237 Cox7bP56393 80 aa10.39□□□□□ -0.75
Usp4-201ENSMUST00000035237 Prr15lQ8JZM2 100 aa10.39□□□□□ -0.75
Usp4-201ENSMUST00000035237 Ndufc1Q9CQY9 76 aa10.38□□□□□ -0.75
Usp4-201ENSMUST00000035237 Gm10308Q9CVR5 141 aa10.38□□□□□ -0.75
Usp4-201ENSMUST00000035237 4930556J24RikQ9D4U7 146 aa10.38□□□□□ -0.75
Usp4-201ENSMUST00000035237 Helz2E9QAM5 2947 aaKnown RBP10.37□□□□□ -0.75
Usp4-201ENSMUST00000035237 Klk9Q32M27 251 aa10.37□□□□□ -0.75
Usp4-201ENSMUST00000035237 E130208F15RikQ3UPV3 143 aa10.36□□□□□ -0.75
Usp4-201ENSMUST00000035237 Msrb1Q9JLC3 116 aa10.35□□□□□ -0.75
Usp4-201ENSMUST00000035237 Ankrd11E9Q4F7 2643 aa10.35□□□□□ -0.75
Usp4-201ENSMUST00000035237 Gm11011D3Z3L9 86 aa10.34□□□□□ -0.75
Usp4-201ENSMUST00000035237 C530025M09RikF6RGA8 229 aa10.34□□□□□ -0.75
Usp4-201ENSMUST00000035237 Pde6gP09174 87 aa10.34□□□□□ -0.75
Usp4-201ENSMUST00000035237 Camk2n2Q78WH7 79 aa10.34□□□□□ -0.75
Usp4-201ENSMUST00000035237 9430015G10RikA2ASP7 199 aa10.34□□□□□ -0.75
Usp4-201ENSMUST00000035237 P01819 144 aa10.34□□□□□ -0.75
Usp4-201ENSMUST00000035237 Gm10320E9PW43 113 aa10.33□□□□□ -0.76
Usp4-201ENSMUST00000035237 Vpreb2P13373 142 aa10.33□□□□□ -0.76
Usp4-201ENSMUST00000035237 Cox7b2Q9D2H1 82 aa10.33□□□□□ -0.76
Usp4-201ENSMUST00000035237 Gm43218A0A0G2JGT0 114 aa10.33□□□□□ -0.76
Usp4-201ENSMUST00000035237 Serp1Q9Z1W5 66 aa10.33□□□□□ -0.76
Usp4-201ENSMUST00000035237 Tep1P97499 2629 aa10.33□□□□□ -0.76
Usp4-201ENSMUST00000035237 Igkv8-34A0A0G2JDU0 121 aa10.31□□□□□ -0.76
Usp4-201ENSMUST00000035237 A830005F24RikQ8BRT5 167 aa10.31□□□□□ -0.76
Usp4-201ENSMUST00000035237 Gm3250E9Q1M3 230 aa10.31□□□□□ -0.76
Usp4-201ENSMUST00000035237 P06320 134 aa10.31□□□□□ -0.76
Usp4-201ENSMUST00000035237 Ighv2-9A0A075B5Q5 116 aa10.3□□□□□ -0.76
Usp4-201ENSMUST00000035237 Cmc4Q61908 68 aa10.3□□□□□ -0.76
Usp4-201ENSMUST00000035237 Gm10337F7DEP7 55 aa10.3□□□□□ -0.76
Usp4-201ENSMUST00000035237 D730001G18RikA0A087WQU7 115 aa10.3□□□□□ -0.76
Usp4-201ENSMUST00000035237 Gm9767G3X930 207 aa10.29□□□□□ -0.76
Usp4-201ENSMUST00000035237 Reg3bP35230 175 aa10.29□□□□□ -0.76
Usp4-201ENSMUST00000035237 Notch1Q01705 2531 aa10.29□□□□□ -0.76
Usp4-201ENSMUST00000035237 Notch2O35516 2470 aa10.28□□□□□ -0.76
Usp4-201ENSMUST00000035237 Defb2P82020 71 aa10.28□□□□□ -0.76
Usp4-201ENSMUST00000035237 Cd164Q9R0L9 197 aa10.28□□□□□ -0.76
Usp4-201ENSMUST00000035237 H2al1aQ5M8Q2 105 aa10.28□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 51.7 ms