RNA–Protein interactions for RNA: ENSMUST00000029422.13

Shox2-201, Transcript of Short stature homeobox protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shox2, Length 3,079 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2-201ENSMUST00000029422 Brk1Q91VR8 75 aa13.72□□□□□ -0.21
Shox2-201ENSMUST00000029422 Ccl21aP84444 133 aa13.72□□□□□ -0.21
Shox2-201ENSMUST00000029422 Ccl21bP86792 133 aa13.72□□□□□ -0.21
Shox2-201ENSMUST00000029422 Ccl21cP86793 133 aa13.72□□□□□ -0.21
Shox2-201ENSMUST00000029422 E130208F15RikQ3UPV3 143 aa13.72□□□□□ -0.21
Shox2-201ENSMUST00000029422 Chchd7Q8K2Q5 85 aa13.72□□□□□ -0.21
Shox2-201ENSMUST00000029422 Igkv8-16A0A0G2JDG9 121 aa13.71□□□□□ -0.21
Shox2-201ENSMUST00000029422 Gm10518F6UQQ9 182 aa13.71□□□□□ -0.21
Shox2-201ENSMUST00000029422 Ube2d4D3YUH6 135 aa13.71□□□□□ -0.22
Shox2-201ENSMUST00000029422 Tmem258P61166 79 aa13.7□□□□□ -0.22
Shox2-201ENSMUST00000029422 Gm10320E9PW43 113 aa13.7□□□□□ -0.22
Shox2-201ENSMUST00000029422 GhrhP16043 103 aa13.7□□□□□ -0.22
Shox2-201ENSMUST00000029422 Trbv13-2A0A140T8N6 113 aa13.69□□□□□ -0.22
Shox2-201ENSMUST00000029422 Igkv8-21A0A140T8P7 120 aa13.69□□□□□ -0.22
Shox2-201ENSMUST00000029422 Gm5153P01627 120 aa13.69□□□□□ -0.22
Shox2-201ENSMUST00000029422 Ormdl1Q921I0 153 aa13.69□□□□□ -0.22
Shox2-201ENSMUST00000029422 Ubl5Q9EPV8 73 aa13.69□□□□□ -0.22
Shox2-201ENSMUST00000029422 Trav9n-4A0A075B631 113 aa13.67□□□□□ -0.22
Shox2-201ENSMUST00000029422 CrygdP04342 174 aa13.67□□□□□ -0.22
Shox2-201ENSMUST00000029422 Hspg2Q05793 3707 aaKnown RBP13.67□□□□□ -0.22
Shox2-201ENSMUST00000029422 BikO70337 150 aa13.67□□□□□ -0.22
Shox2-201ENSMUST00000029422 Lamtor3O88653 124 aa13.67□□□□□ -0.22
Shox2-201ENSMUST00000029422 PrcdQ00LT2 53 aa13.67□□□□□ -0.22
Shox2-201ENSMUST00000029422 Gm9903Q8C9Y8 129 aa13.67□□□□□ -0.22
Shox2-201ENSMUST00000029422 Leap2Q91V13 76 aa13.67□□□□□ -0.22
Shox2-201ENSMUST00000029422 Reg3dQ9QUS9 175 aa13.66□□□□□ -0.22
Shox2-201ENSMUST00000029422 C530025M09RikF6RGA8 229 aa13.65□□□□□ -0.22
Shox2-201ENSMUST00000029422 Unc79Q0KK59 2596 aa13.65□□□□□ -0.22
Shox2-201ENSMUST00000029422 Igkv4-54A0A0G2JES9 117 aa13.65□□□□□ -0.23
Shox2-201ENSMUST00000029422 Igkv8-27A0A0G2JF28 120 aa13.65□□□□□ -0.23
Shox2-201ENSMUST00000029422 Igkv8-30A0A140T8M3 121 aa13.65□□□□□ -0.23
Shox2-201ENSMUST00000029422 Odf3l2Q3TZ65 277 aa13.64□□□□□ -0.23
Shox2-201ENSMUST00000029422 Higd2aQ9CQJ1 106 aa13.64□□□□□ -0.23
Shox2-201ENSMUST00000029422 Col7a1Q63870 2944 aa13.64□□□□□ -0.23
Shox2-201ENSMUST00000029422 Igkv8-24A0A140T8P5 121 aa13.64□□□□□ -0.23
Shox2-201ENSMUST00000029422 Lyrm9Q3UN90 78 aa13.63□□□□□ -0.23
Shox2-201ENSMUST00000029422 Fam19a5Q91WE9 132 aa13.63□□□□□ -0.23
Shox2-201ENSMUST00000029422 SnurfQ9WU12 71 aa13.63□□□□□ -0.23
Shox2-201ENSMUST00000029422 Rps28P62858 69 aaKnown RBP13.62□□□□□ -0.23
Shox2-201ENSMUST00000029422 Ighv10-3A0A075B5T6 119 aa13.62□□□□□ -0.23
Shox2-201ENSMUST00000029422 BsnO88737 3942 aa13.62□□□□□ -0.23
Shox2-201ENSMUST00000029422 Gm19935A0A1B0GSF9 52 aa13.61□□□□□ -0.23
Shox2-201ENSMUST00000029422 Krtap16-1A2A5X5 502 aa13.61□□□□□ -0.23
Shox2-201ENSMUST00000029422 Igkv8-26A0A075B5N5 123 aa13.6□□□□□ -0.23
Shox2-201ENSMUST00000029422 Ighv1-59A0A0A6YXE0 117 aa13.6□□□□□ -0.23
Shox2-201ENSMUST00000029422 Fam19a3Q7TPG6 132 aa13.6□□□□□ -0.23
Shox2-201ENSMUST00000029422 Gm11565A2A4M7 156 aa13.59□□□□□ -0.23
Shox2-201ENSMUST00000029422 Spink4O35679 86 aa13.59□□□□□ -0.23
Shox2-201ENSMUST00000029422 Ly6c2P0CW03 131 aa13.59□□□□□ -0.23
Shox2-201ENSMUST00000029422 Tex15F8VPN2 2785 aa13.58□□□□□ -0.24
Shox2-201ENSMUST00000029422 A0A286YCN5 57 aa13.58□□□□□ -0.24
Shox2-201ENSMUST00000029422 Gm17689B3GLJ4 109 aa13.58□□□□□ -0.24
Shox2-201ENSMUST00000029422 Gm10308Q9CVR5 141 aa13.58□□□□□ -0.24
Shox2-201ENSMUST00000029422 Mast4Q811L6 2618 aa13.58□□□□□ -0.24
Shox2-201ENSMUST00000029422 Defa27F2Z403 93 aa13.58□□□□□ -0.24
Shox2-201ENSMUST00000029422 Gm9805F6YK59 57 aa13.58□□□□□ -0.24
Shox2-201ENSMUST00000029422 Ighv13-2A0A0A6YWN3 119 aa13.56□□□□□ -0.24
Shox2-201ENSMUST00000029422 Ighv2-9A0A075B5Q5 116 aa13.54□□□□□ -0.24
Shox2-201ENSMUST00000029422 Gm43218A0A0G2JGT0 114 aa13.53□□□□□ -0.24
Shox2-201ENSMUST00000029422 Igkv3-9A0A140T8P4 119 aa13.53□□□□□ -0.24
Shox2-201ENSMUST00000029422 Inafm2A0A1L1STD6 152 aa13.52□□□□□ -0.24
Shox2-201ENSMUST00000029422 Gm3250E9Q1M3 230 aa13.52□□□□□ -0.24
Shox2-201ENSMUST00000029422 Defb37Q7TMD2 62 aa13.5□□□□□ -0.25
Shox2-201ENSMUST00000029422 Sprr1bQ62267 153 aa13.5□□□□□ -0.25
Shox2-201ENSMUST00000029422 Igkv1-88A0A140T8N1 120 aa13.49□□□□□ -0.25
Shox2-201ENSMUST00000029422 P01819 144 aa13.49□□□□□ -0.25
Shox2-201ENSMUST00000029422 CnbpP53996 178 aaKnown RBP13.48□□□□□ -0.25
Shox2-201ENSMUST00000029422 Msrb1Q9JLC3 116 aa13.48□□□□□ -0.25
Shox2-201ENSMUST00000029422 Igkv1-110A0A0B4J1I0 119 aa13.48□□□□□ -0.25
Shox2-201ENSMUST00000029422 Tcl1b3P56842 122 aa13.48□□□□□ -0.25
Shox2-201ENSMUST00000029422 9530003J23RikQ8BM26 151 aa13.48□□□□□ -0.25
Shox2-201ENSMUST00000029422 Cox7bP56393 80 aa13.46□□□□□ -0.25
Shox2-201ENSMUST00000029422 Ighv10-1A0A0B4J1J6 119 aa13.46□□□□□ -0.25
Shox2-201ENSMUST00000029422 Igkv4-61A0A0G2JH00 117 aa13.46□□□□□ -0.25
Shox2-201ENSMUST00000029422 Krtap11-1E9Q2E9 183 aa13.45□□□□□ -0.26
Shox2-201ENSMUST00000029422 Rbm3O89086 153 aaKnown RBP13.45□□□□□ -0.26
Shox2-201ENSMUST00000029422 Mrpl52Q9D0Y8 121 aa13.45□□□□□ -0.26
Shox2-201ENSMUST00000029422 4930556J24RikQ9D4U7 146 aa13.45□□□□□ -0.26
Shox2-201ENSMUST00000029422 Cd99Q8VCN6 175 aa13.45□□□□□ -0.26
Shox2-201ENSMUST00000029422 A830005F24RikQ8BRT5 167 aa13.45□□□□□ -0.26
Shox2-201ENSMUST00000029422 9430015G10RikA2ASP7 199 aa13.44□□□□□ -0.26
Shox2-201ENSMUST00000029422 PtprqP0C5E4 2300 aa13.42□□□□□ -0.26
Shox2-201ENSMUST00000029422 Vpreb1P13372 142 aa13.41□□□□□ -0.26
Shox2-201ENSMUST00000029422 Defb2P82020 71 aa13.41□□□□□ -0.26
Shox2-201ENSMUST00000029422 Q8R092 253 aa13.41□□□□□ -0.26
Shox2-201ENSMUST00000029422 Dad1P61804 113 aa13.41□□□□□ -0.26
Shox2-201ENSMUST00000029422 Igkv3-1A0A075B5P1 119 aa13.39□□□□□ -0.27
Shox2-201ENSMUST00000029422 Igkv1-122A0A140T8M9 119 aa13.38□□□□□ -0.27
Shox2-201ENSMUST00000029422 Ufsp1Q9CZP0 217 aa13.38□□□□□ -0.27
Shox2-201ENSMUST00000029422 ApcQ61315 2845 aa13.38□□□□□ -0.27
Shox2-201ENSMUST00000029422 A730071L15RikQ8C4X0 137 aa13.38□□□□□ -0.27
Shox2-201ENSMUST00000029422 Gm9767G3X930 207 aa13.37□□□□□ -0.27
Shox2-201ENSMUST00000029422 D730001G18RikA0A087WQU7 115 aa13.37□□□□□ -0.27
Shox2-201ENSMUST00000029422 Gm3233E9Q2H5 230 aa13.37□□□□□ -0.27
Shox2-201ENSMUST00000029422 E130114P18RikF6S0S7 154 aa13.36□□□□□ -0.27
Shox2-201ENSMUST00000029422 Pet100P0DJE0 76 aa13.36□□□□□ -0.27
Shox2-201ENSMUST00000029422 Mrpl55Q9CZ83 127 aa13.36□□□□□ -0.27
Shox2-201ENSMUST00000029422 Nbeal2Q6ZQA0 2742 aa13.35□□□□□ -0.27
Shox2-201ENSMUST00000029422 H2al1aQ5M8Q2 105 aa13.35□□□□□ -0.27
Shox2-201ENSMUST00000029422 Igkv8-34A0A0G2JDU0 121 aa13.34□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 54.5 ms