RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Igkv4-58A0A0G2JGI6 119 aa12.27□□□□□ -0.44
Ptpra-201ENSMUST00000028769 SvipQ3UZP4 77 aa12.27□□□□□ -0.44
Ptpra-201ENSMUST00000028769 Tmem86bQ497J1 226 aa12.27□□□□□ -0.44
Ptpra-201ENSMUST00000028769 BB014433Q8C5R5 389 aa12.27□□□□□ -0.44
Ptpra-201ENSMUST00000028769 Ighv13-2A0A0A6YWN3 119 aa12.26□□□□□ -0.45
Ptpra-201ENSMUST00000028769 MplkipQ9D011 178 aa12.26□□□□□ -0.45
Ptpra-201ENSMUST00000028769 Gm28539A0A087WSL9 92 aa12.26□□□□□ -0.45
Ptpra-201ENSMUST00000028769 Odf3l2Q3TZ65 277 aa12.26□□□□□ -0.45
Ptpra-201ENSMUST00000028769 Reg3dQ9QUS9 175 aa12.26□□□□□ -0.45
Ptpra-201ENSMUST00000028769 Spink4O35679 86 aa12.25□□□□□ -0.45
Ptpra-201ENSMUST00000028769 Hist1h4aP62806 103 aaKnown RBP12.25□□□□□ -0.45
Ptpra-201ENSMUST00000028769 Gm10735Q3US96 136 aa12.25□□□□□ -0.45
Ptpra-201ENSMUST00000028769 Gm867A0A1W2P7T4 151 aa12.24□□□□□ -0.45
Ptpra-201ENSMUST00000028769 Defa4P28311 92 aa12.24□□□□□ -0.45
Ptpra-201ENSMUST00000028769 Fn1P11276 2477 aaKnown RBP12.24□□□□□ -0.45
Ptpra-201ENSMUST00000028769 HrnrQ8VHD8 2496 aa12.24□□□□□ -0.45
Ptpra-201ENSMUST00000028769 Apoc4Q61268 124 aa12.24□□□□□ -0.45
Ptpra-201ENSMUST00000028769 CrygfQ9CXV3 174 aa12.24□□□□□ -0.45
Ptpra-201ENSMUST00000028769 Gm7138L7N2C3 230 aa12.24□□□□□ -0.45
Ptpra-201ENSMUST00000028769 Atp5eP56382 52 aa12.24□□□□□ -0.45
Ptpra-201ENSMUST00000028769 Gm3238W4VSP7 230 aa12.24□□□□□ -0.45
Ptpra-201ENSMUST00000028769 Tmem213Q08EA8 116 aa12.23□□□□□ -0.45
Ptpra-201ENSMUST00000028769 Ighv1-59A0A0A6YXE0 117 aa12.23□□□□□ -0.45
Ptpra-201ENSMUST00000028769 Igkv3-9A0A140T8P4 119 aa12.22□□□□□ -0.45
Ptpra-201ENSMUST00000028769 Erdr1J3QMM0 206 aa12.22□□□□□ -0.45
Ptpra-201ENSMUST00000028769 C530025M09RikF6RGA8 229 aa12.22□□□□□ -0.45
Ptpra-201ENSMUST00000028769 Klk11Q9QYN3 276 aa12.22□□□□□ -0.45
Ptpra-201ENSMUST00000028769 Gm3618D3Z4P5 127 aa12.21□□□□□ -0.45
Ptpra-201ENSMUST00000028769 Gm2916Q9D9B9 127 aa12.21□□□□□ -0.45
Ptpra-201ENSMUST00000028769 Srrm2Q8BTI8 2703 aaKnown RBP12.21□□□□□ -0.46
Ptpra-201ENSMUST00000028769 Rpl18aP62717 176 aaKnown RBP12.21□□□□□ -0.46
Ptpra-201ENSMUST00000028769 Smim26Q3V460 107 aa12.2□□□□□ -0.46
Ptpra-201ENSMUST00000028769 Igkv8-18A0A0B4J1J3 123 aa12.19□□□□□ -0.46
Ptpra-201ENSMUST00000028769 Igkv4-61A0A0G2JH00 117 aa12.19□□□□□ -0.46
Ptpra-201ENSMUST00000028769 Defa21Q8C1P2 93 aa12.19□□□□□ -0.46
Ptpra-201ENSMUST00000028769 Krtap11-1E9Q2E9 183 aa12.18□□□□□ -0.46
Ptpra-201ENSMUST00000028769 Igkv3-1A0A075B5P1 119 aa12.18□□□□□ -0.46
Ptpra-201ENSMUST00000028769 Ighv2-9-1A0A075B697 116 aa12.18□□□□□ -0.46
Ptpra-201ENSMUST00000028769 1810062G17RikG3X8Y2 129 aa12.18□□□□□ -0.46
Ptpra-201ENSMUST00000028769 Igkv1-88A0A140T8N1 120 aa12.16□□□□□ -0.46
Ptpra-201ENSMUST00000028769 Gm10320E9PW43 113 aa12.16□□□□□ -0.46
Ptpra-201ENSMUST00000028769 Tmem223Q9CQE2 199 aaKnown RBP12.16□□□□□ -0.46
Ptpra-201ENSMUST00000028769 CrygdP04342 174 aa12.16□□□□□ -0.46
Ptpra-201ENSMUST00000028769 CrygeQ03740 174 aa12.16□□□□□ -0.46
Ptpra-201ENSMUST00000028769 A830031A19RikQ8BNT5 113 aa12.16□□□□□ -0.46
Ptpra-201ENSMUST00000028769 Cystm1Q8K353 104 aa12.16□□□□□ -0.46
Ptpra-201ENSMUST00000028769 Ifitm6A0A1B0GS75 124 aa12.15□□□□□ -0.47
Ptpra-201ENSMUST00000028769 Gm5153P01627 120 aa12.13□□□□□ -0.47
Ptpra-201ENSMUST00000028769 Gm10845Q3UNY9 185 aa12.13□□□□□ -0.47
Ptpra-201ENSMUST00000028769 Gm7137J3QMW1 236 aa12.13□□□□□ -0.47
Ptpra-201ENSMUST00000028769 Acyp1P56376 99 aa12.12□□□□□ -0.47
Ptpra-201ENSMUST00000028769 Defb37Q7TMD2 62 aa12.11□□□□□ -0.47
Ptpra-201ENSMUST00000028769 VwfQ8CIZ8 2813 aa12.1□□□□□ -0.47
Ptpra-201ENSMUST00000028769 ScxQ64124 207 aa12.1□□□□□ -0.47
Ptpra-201ENSMUST00000028769 Gm43218A0A0G2JGT0 114 aa12.1□□□□□ -0.47
Ptpra-201ENSMUST00000028769 Lamtor3O88653 124 aa12.09□□□□□ -0.47
Ptpra-201ENSMUST00000028769 4930519P11RikQ9CUJ8 166 aa12.09□□□□□ -0.47
Ptpra-201ENSMUST00000028769 Ighv1-56A0A0A6YXG2 117 aa12.09□□□□□ -0.47
Ptpra-201ENSMUST00000028769 Fam19a1Q7TPG8 133 aa12.09□□□□□ -0.47
Ptpra-201ENSMUST00000028769 Gm9805F6YK59 57 aa12.08□□□□□ -0.48
Ptpra-201ENSMUST00000028769 Defa23Q5G866 93 aa12.08□□□□□ -0.48
Ptpra-201ENSMUST00000028769 7530416G11RikJ3QJX6 159 aa12.07□□□□□ -0.48
Ptpra-201ENSMUST00000028769 EnhoQ8K1D8 76 aa12.07□□□□□ -0.48
Ptpra-201ENSMUST00000028769 Q9DAA7 145 aa12.06□□□□□ -0.48
Ptpra-201ENSMUST00000028769 Smlr1J3QMJ4 66 aa12.06□□□□□ -0.48
Ptpra-201ENSMUST00000028769 Ufsp1Q9CZP0 217 aa12.06□□□□□ -0.48
Ptpra-201ENSMUST00000028769 Reg3bP35230 175 aa12.04□□□□□ -0.48
Ptpra-201ENSMUST00000028769 4930518I15RikQ3V2W7 57 aa12.03□□□□□ -0.48
Ptpra-201ENSMUST00000028769 Igkv1-122A0A140T8M9 119 aa12.02□□□□□ -0.49
Ptpra-201ENSMUST00000028769 Tmem243B2RVB9 118 aa12.02□□□□□ -0.49
Ptpra-201ENSMUST00000028769 9530053A07RikE9PVG8 2581 aa12.02□□□□□ -0.49
Ptpra-201ENSMUST00000028769 Sprr1bQ62267 153 aa12.01□□□□□ -0.49
Ptpra-201ENSMUST00000028769 Fam229bQ8CF36 80 aa12.01□□□□□ -0.49
Ptpra-201ENSMUST00000028769 Igkv8-34A0A0G2JDU0 121 aa12□□□□□ -0.49
Ptpra-201ENSMUST00000028769 Igkv8-27A0A0G2JF28 120 aa12□□□□□ -0.49
Ptpra-201ENSMUST00000028769 Igkv8-30A0A140T8M3 121 aa12□□□□□ -0.49
Ptpra-201ENSMUST00000028769 Gm9903Q8C9Y8 129 aa12□□□□□ -0.49
Ptpra-201ENSMUST00000028769 A730009L09RikA0A1B0GS82 72 aa11.99□□□□□ -0.49
Ptpra-201ENSMUST00000028769 Msrb1Q9JLC3 116 aa11.98□□□□□ -0.49
Ptpra-201ENSMUST00000028769 Scgb1b2O35176 93 aa11.98□□□□□ -0.49
Ptpra-201ENSMUST00000028769 E130208F15RikQ3UPV3 143 aa11.98□□□□□ -0.49
Ptpra-201ENSMUST00000028769 Tmem254aP0DN89 123 aa11.97□□□□□ -0.49
Ptpra-201ENSMUST00000028769 Tmem254bP0DN90 123 aa11.97□□□□□ -0.49
Ptpra-201ENSMUST00000028769 Tmem254cP0DN91 123 aa11.97□□□□□ -0.49
Ptpra-201ENSMUST00000028769 Gm17577J3QNF7 156 aa11.97□□□□□ -0.49
Ptpra-201ENSMUST00000028769 Igkv8-26A0A075B5N5 123 aa11.96□□□□□ -0.49
Ptpra-201ENSMUST00000028769 B230307C23RikQ8BLB2 64 aa11.96□□□□□ -0.49
Ptpra-201ENSMUST00000028769 Smim29Q8R043 75 aa11.96□□□□□ -0.49
Ptpra-201ENSMUST00000028769 Igkv8-21A0A140T8P7 120 aa11.96□□□□□ -0.5
Ptpra-201ENSMUST00000028769 Ube2d4D3YUH6 135 aa11.96□□□□□ -0.5
Ptpra-201ENSMUST00000028769 Ormdl1Q921I0 153 aa11.96□□□□□ -0.5
Ptpra-201ENSMUST00000028769 Snhg11Q4G0K9 87 aa11.94□□□□□ -0.5
Ptpra-201ENSMUST00000028769 4930556J24RikQ9D4U7 146 aa11.94□□□□□ -0.5
Ptpra-201ENSMUST00000028769 Znf414Q9DCK4 299 aa11.94□□□□□ -0.5
Ptpra-201ENSMUST00000028769 SmcpP15265 143 aa11.94□□□□□ -0.5
Ptpra-201ENSMUST00000028769 Ubl5Q9EPV8 73 aa11.94□□□□□ -0.5
Ptpra-201ENSMUST00000028769 A0A286YE02 88 aa11.94□□□□□ -0.5
Ptpra-201ENSMUST00000028769 Gm17689B3GLJ4 109 aa11.94□□□□□ -0.5
Ptpra-201ENSMUST00000028769 Cox7bP56393 80 aa11.93□□□□□ -0.5
Ptpra-201ENSMUST00000028769 Sslp1Q3UN54 99 aa11.93□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 119 ms