RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 BB014433Q8C5R5 389 aa9.56□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Xcl1P47993 114 aa9.56□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Fgfbp3Q1HCM0 245 aa9.56□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Tex15F8VPN2 2785 aa9.55□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 2310009B15RikA0A0A6YWI4 143 aa9.55□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Trav11A0A0B4J1J9 114 aa9.55□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Kmt2bO08550 2713 aa9.54□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Gm3233E9Q2H5 230 aa9.54□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Ighv2-6-8A0A0A6YWY9 116 aa9.54□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Igkv4-53A0A0G2JFC6 119 aa9.54□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Gm10322F7D7I4 111 aa9.54□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Ighv1-62-1A0A075B5U3 116 aa9.53□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Ighv1-5A0A0A6YWG2 117 aa9.53□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Gm10518F6UQQ9 182 aa9.53□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Gm10251J3QPM5 127 aa9.53□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Fxyd5P97808 178 aa9.53□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Lage3Q9CR70 148 aa9.53□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Igkv4-61A0A0G2JH00 117 aa9.52□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 P01745 121 aa9.52□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Ppp1r32Q148A4 427 aa9.52□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 Ly6hQ9WUC3 139 aa9.52□□□□□ -0.88
Pdgfra-205ENSMUST00000201711 PemtQ61907 199 aa9.52□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 Znf580Q9DB38 172 aa9.52□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 Hist1h4aP62806 103 aaKnown RBP9.51□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 Klk12B2RVZ0 247 aa9.51□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 Bri3P28662 125 aa9.51□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 1700010B08RikQ9DAI7 102 aa9.51□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 CrygfQ9CXV3 174 aa9.51□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 Defa7P50705 93 aa9.5□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 BC025920Q3US60 128 aa9.5□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 Scgb1b2O35176 93 aa9.5□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 NpwA0A1L1STR8 176 aa9.5□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 Klk11Q9QYN3 276 aa9.5□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 Timm17bQ9Z0V7 172 aa9.5□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 Gm10135F6TEE5 83 aa9.49□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 Reg3bP35230 175 aa9.49□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 A0A286YCN5 57 aa9.49□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 SvipQ3UZP4 77 aa9.49□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 MplkipQ9D011 178 aa9.49□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 Crip2Q9DCT8 208 aaKnown RBP9.49□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 Krtap27-1E9PX37 202 aa9.48□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 Pglyrp4Q0VB07 374 aa9.48□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 Trav9n-4A0A075B631 113 aa9.48□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 Igkv1-88A0A140T8N1 120 aa9.48□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 Lamtor3O88653 124 aa9.48□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 P01755 137 aa9.48□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 Igkv2-109A0A075B5K6 120 aa9.47□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 Defa28D3Z1V9 94 aa9.47□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 Gm17472A0A075B683 117 aa9.46□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 Shisa2Q8QZV2 295 aa9.46□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 MifP34884 115 aaKnown RBP9.46□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 Cdc42se2Q8BGH7 84 aa9.46□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 Cd99Q8VCN6 175 aa9.46□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 Wfdc12Q9JHY3 85 aa9.46□□□□□ -0.89
Pdgfra-205ENSMUST00000201711 Igkv4-72A0A0B4J1I4 117 aa9.46□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 HrnrQ8VHD8 2496 aa9.45□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 Zfhx3Q61329 3726 aa9.45□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 Gm10647E9Q8X0 124 aa9.45□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 Ighv1-61P01749 117 aa9.45□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 Pkd1l1Q8R526 2615 aa9.44□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 Igkv1-122A0A140T8M9 119 aa9.44□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 Gm9747Q810H1 104 aa9.43□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 9430069I07RikQ9CX21 111 aa9.43□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 Igkv4-54A0A0G2JES9 117 aa9.43□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 1700011M02RikB1AX35 88 aa9.43□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 Igsf10Q3V1M1 2594 aa9.43□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 Trav14d-3-dv8A0A075B619 120 aa9.42□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 D730001G18RikA0A087WQU7 115 aa9.42□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 Ighv1-59A0A0A6YXE0 117 aa9.42□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 Eif4ebp1Q60876 117 aa9.42□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 Defa23Q5G866 93 aa9.42□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 Svep1A2AVA0 3567 aa9.41□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 Chchd7Q8K2Q5 85 aa9.41□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 Rpl18aP62717 176 aaKnown RBP9.41□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 Acyp1P56376 99 aa9.41□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 Smim26Q3V460 107 aa9.41□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 Spry2Q9QXV8 315 aa9.41□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 CenpwQ3URR0 86 aa9.4□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 Defa21Q8C1P2 93 aa9.4□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 Defb10Q8R2I8 73 aa9.4□□□□□ -0.9
Pdgfra-205ENSMUST00000201711 Gm20726G3UX18 150 aa9.4□□□□□ -0.91
Pdgfra-205ENSMUST00000201711 Smlr1J3QMJ4 66 aa9.4□□□□□ -0.91
Pdgfra-205ENSMUST00000201711 CdsnQ7TPC1 561 aa9.4□□□□□ -0.91
Pdgfra-205ENSMUST00000201711 Igf1P05017 153 aa9.39□□□□□ -0.91
Pdgfra-205ENSMUST00000201711 4930432M17RikQ3V0W9 174 aa9.39□□□□□ -0.91
Pdgfra-205ENSMUST00000201711 Muc4Q8JZM8 3443 aa9.39□□□□□ -0.91
Pdgfra-205ENSMUST00000201711 Tfpi2O35536 230 aa9.39□□□□□ -0.91
Pdgfra-205ENSMUST00000201711 Camk2n2Q78WH7 79 aa9.39□□□□□ -0.91
Pdgfra-205ENSMUST00000201711 Ufsp1Q9CZP0 217 aa9.39□□□□□ -0.91
Pdgfra-205ENSMUST00000201711 Trbv13-2A0A140T8N6 113 aa9.38□□□□□ -0.91
Pdgfra-205ENSMUST00000201711 CrygdP04342 174 aa9.38□□□□□ -0.91
Pdgfra-205ENSMUST00000201711 CrygeQ03740 174 aa9.38□□□□□ -0.91
Pdgfra-205ENSMUST00000201711 Plac8l1Q08EJ0 177 aa9.38□□□□□ -0.91
Pdgfra-205ENSMUST00000201711 3110070M22RikQ9DAQ7 118 aa9.38□□□□□ -0.91
Pdgfra-205ENSMUST00000201711 Krtap24-1G3X9A2 248 aa9.37□□□□□ -0.91
Pdgfra-205ENSMUST00000201711 Tmem223Q9CQE2 199 aaKnown RBP9.37□□□□□ -0.91
Pdgfra-205ENSMUST00000201711 Krtap26-1Q9D7N2 215 aa9.36□□□□□ -0.91
Pdgfra-205ENSMUST00000201711 E130114P18RikF6S0S7 154 aa9.35□□□□□ -0.91
Pdgfra-205ENSMUST00000201711 P06329 120 aa9.35□□□□□ -0.91
Pdgfra-205ENSMUST00000201711 Rpl39lQ9CQD0 51 aa9.35□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms