RNA–Protein interactions for RNA: ENSMUST00000169486.8

Ebf3-204, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 4,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-204ENSMUST00000169486 Chchd7Q8K2Q5 85 aa12.6□□□□□ -0.39
Ebf3-204ENSMUST00000169486 Kiaa1549Q68FD9 1940 aa12.6□□□□□ -0.39
Ebf3-204ENSMUST00000169486 Gm42715A0A087WP63 3095 aaKnown RBP12.59□□□□□ -0.39
Ebf3-204ENSMUST00000169486 4930564D02RikQ9D4S4 103 aa12.59□□□□□ -0.39
Ebf3-204ENSMUST00000169486 Trbv13-2A0A140T8N6 113 aa12.59□□□□□ -0.39
Ebf3-204ENSMUST00000169486 9230102O04RikA2ASX7 82 aa12.58□□□□□ -0.4
Ebf3-204ENSMUST00000169486 Crip2Q9DCT8 208 aaKnown RBP12.58□□□□□ -0.4
Ebf3-204ENSMUST00000169486 Ndufs5Q99LY9 106 aa12.58□□□□□ -0.4
Ebf3-204ENSMUST00000169486 PtprbB2RU80 1998 aa12.58□□□□□ -0.4
Ebf3-204ENSMUST00000169486 BaalcQ8VHV1 145 aa12.57□□□□□ -0.4
Ebf3-204ENSMUST00000169486 Atox1O08997 68 aaKnown RBP12.57□□□□□ -0.4
Ebf3-204ENSMUST00000169486 SetxA2AKX3 2646 aa12.56□□□□□ -0.4
Ebf3-204ENSMUST00000169486 Bahcc1Q3UHR0 2643 aa12.56□□□□□ -0.4
Ebf3-204ENSMUST00000169486 MtorQ9JLN9 2549 aa12.55□□□□□ -0.4
Ebf3-204ENSMUST00000169486 Gm8439G3UWA7 96 aa12.55□□□□□ -0.4
Ebf3-204ENSMUST00000169486 Crip3Q6Q6R3 243 aa12.55□□□□□ -0.4
Ebf3-204ENSMUST00000169486 Defb42Q8BVB5 75 aa12.55□□□□□ -0.4
Ebf3-204ENSMUST00000169486 Sox16Q62247 57 aa12.55□□□□□ -0.4
Ebf3-204ENSMUST00000169486 Fam19a5Q91WE9 132 aa12.55□□□□□ -0.4
Ebf3-204ENSMUST00000169486 4930432M17RikQ3V0W9 174 aa12.54□□□□□ -0.4
Ebf3-204ENSMUST00000169486 TeppQ6IMH0 216 aa12.54□□□□□ -0.4
Ebf3-204ENSMUST00000169486 Trav14-1A0A0G2JF94 121 aa12.54□□□□□ -0.4
Ebf3-204ENSMUST00000169486 Tns1E9Q0S6 1888 aaKnown RBP12.54□□□□□ -0.4
Ebf3-204ENSMUST00000169486 H2al1bA0A087WP11 105 aa12.53□□□□□ -0.4
Ebf3-204ENSMUST00000169486 Defb13Q8R2I4 64 aa12.53□□□□□ -0.4
Ebf3-204ENSMUST00000169486 NpwA0A1L1STR8 176 aa12.53□□□□□ -0.4
Ebf3-204ENSMUST00000169486 Q9DAB9 146 aa12.53□□□□□ -0.4
Ebf3-204ENSMUST00000169486 Cdip1Q9DB75 208 aa12.53□□□□□ -0.4
Ebf3-204ENSMUST00000169486 PcntP48725 2898 aa12.53□□□□□ -0.4
Ebf3-204ENSMUST00000169486 Rpl28P41105 137 aaKnown RBP12.53□□□□□ -0.4
Ebf3-204ENSMUST00000169486 Ighv10-3A0A075B5T6 119 aa12.52□□□□□ -0.4
Ebf3-204ENSMUST00000169486 Pla2g1bQ9Z0Y2 146 aa12.52□□□□□ -0.4
Ebf3-204ENSMUST00000169486 Lrp4Q8VI56 1905 aa12.52□□□□□ -0.41
Ebf3-204ENSMUST00000169486 Gm19935A0A1B0GSF9 52 aa12.51□□□□□ -0.41
Ebf3-204ENSMUST00000169486 Gm9922Q8C3P1 144 aa12.51□□□□□ -0.41
Ebf3-204ENSMUST00000169486 Gm5142Q8C5X9 133 aa12.51□□□□□ -0.41
Ebf3-204ENSMUST00000169486 Gm11011D3Z3L9 86 aa12.51□□□□□ -0.41
Ebf3-204ENSMUST00000169486 A830031A19RikQ8BNT5 113 aa12.51□□□□□ -0.41
Ebf3-204ENSMUST00000169486 Obox2E9PXV9 151 aa12.51□□□□□ -0.41
Ebf3-204ENSMUST00000169486 TrrapQ80YV3 2565 aaKnown RBP12.51□□□□□ -0.41
Ebf3-204ENSMUST00000169486 Igkv3-3A0A140T8Q0 119 aa12.5□□□□□ -0.41
Ebf3-204ENSMUST00000169486 Krtap27-1E9PX37 202 aa12.5□□□□□ -0.41
Ebf3-204ENSMUST00000169486 Igkv3-4A0A140T8Q4 119 aa12.5□□□□□ -0.41
Ebf3-204ENSMUST00000169486 Gm10845Q3UNY9 185 aa12.49□□□□□ -0.41
Ebf3-204ENSMUST00000169486 A930009A15RikG3UYI6 118 aa12.48□□□□□ -0.41
Ebf3-204ENSMUST00000169486 Shisa2Q8QZV2 295 aa12.48□□□□□ -0.41
Ebf3-204ENSMUST00000169486 Gpha2Q925Q5 128 aa12.46□□□□□ -0.41
Ebf3-204ENSMUST00000169486 E130114P18RikF6S0S7 154 aa12.46□□□□□ -0.42
Ebf3-204ENSMUST00000169486 Gm10337F7DEP7 55 aa12.46□□□□□ -0.42
Ebf3-204ENSMUST00000169486 Smr3aQ61900 147 aa12.46□□□□□ -0.42
Ebf3-204ENSMUST00000169486 Wfdc13Q5DQQ6 81 aa12.45□□□□□ -0.42
Ebf3-204ENSMUST00000169486 BC025920Q3US60 128 aa12.44□□□□□ -0.42
Ebf3-204ENSMUST00000169486 Gm3443F7CCV5 94 aa12.44□□□□□ -0.42
Ebf3-204ENSMUST00000169486 4930556J24RikQ9D4U7 146 aa12.42□□□□□ -0.42
Ebf3-204ENSMUST00000169486 U90926O08546 118 aa12.42□□□□□ -0.42
Ebf3-204ENSMUST00000169486 PscaP57096 123 aa12.42□□□□□ -0.42
Ebf3-204ENSMUST00000169486 Wfdc10Q3V2J9 124 aa12.41□□□□□ -0.42
Ebf3-204ENSMUST00000169486 Zfp462B1AWL2 2495 aaKnown RBP12.41□□□□□ -0.42
Ebf3-204ENSMUST00000169486 SbsponQ3UPR9 264 aa12.41□□□□□ -0.42
Ebf3-204ENSMUST00000169486 Prr9Q8BV84 116 aa12.41□□□□□ -0.42
Ebf3-204ENSMUST00000169486 Gm10549Q3URY4 149 aa12.41□□□□□ -0.42
Ebf3-204ENSMUST00000169486 Ifitm6A0A1B0GS75 124 aa12.4□□□□□ -0.42
Ebf3-204ENSMUST00000169486 A0A286YE49 62 aa12.4□□□□□ -0.42
Ebf3-204ENSMUST00000169486 Ighv2-9-1A0A075B697 116 aa12.4□□□□□ -0.42
Ebf3-204ENSMUST00000169486 H2al1aQ5M8Q2 105 aa12.39□□□□□ -0.43
Ebf3-204ENSMUST00000169486 H2al1eQ810S6 105 aa12.39□□□□□ -0.43
Ebf3-204ENSMUST00000169486 Wfdc15aQ8BH89 80 aa12.39□□□□□ -0.43
Ebf3-204ENSMUST00000169486 CrygfQ9CXV3 174 aa12.39□□□□□ -0.43
Ebf3-204ENSMUST00000169486 SnurfQ9WU12 71 aa12.38□□□□□ -0.43
Ebf3-204ENSMUST00000169486 Serp1Q9Z1W5 66 aa12.38□□□□□ -0.43
Ebf3-204ENSMUST00000169486 Sec61gP60060 68 aa12.38□□□□□ -0.43
Ebf3-204ENSMUST00000169486 Gm9573F7C950 1606 aa12.37□□□□□ -0.43
Ebf3-204ENSMUST00000169486 P06329 120 aa12.37□□□□□ -0.43
Ebf3-204ENSMUST00000169486 Tcl1b5P56845 121 aa12.37□□□□□ -0.43
Ebf3-204ENSMUST00000169486 Defb38Q7TNV7 63 aa12.36□□□□□ -0.43
Ebf3-204ENSMUST00000169486 Myo18bE9PV66 2605 aa12.35□□□□□ -0.43
Ebf3-204ENSMUST00000169486 Gm9767G3X930 207 aa12.35□□□□□ -0.43
Ebf3-204ENSMUST00000169486 Cep350E9Q309 3095 aa12.35□□□□□ -0.43
Ebf3-204ENSMUST00000169486 3110070M22RikQ9DAQ7 118 aa12.35□□□□□ -0.43
Ebf3-204ENSMUST00000169486 Sprr2jO70561 109 aa12.34□□□□□ -0.43
Ebf3-204ENSMUST00000169486 SycnQ8VCK7 134 aa12.34□□□□□ -0.43
Ebf3-204ENSMUST00000169486 Igkv8-21A0A140T8P7 120 aa12.34□□□□□ -0.43
Ebf3-204ENSMUST00000169486 Ndufb1P0DN34 57 aa12.34□□□□□ -0.43
Ebf3-204ENSMUST00000169486 Gm3285A0A1W2P7U0 201 aa12.34□□□□□ -0.43
Ebf3-204ENSMUST00000169486 Defb45Q3V490 66 aa12.34□□□□□ -0.43
Ebf3-204ENSMUST00000169486 Gm10267M0QWD8 85 aa12.32□□□□□ -0.44
Ebf3-204ENSMUST00000169486 Gm5153P01627 120 aa12.32□□□□□ -0.44
Ebf3-204ENSMUST00000169486 Cd164l2Q9D6W7 172 aa12.32□□□□□ -0.44
Ebf3-204ENSMUST00000169486 Dnah12Q3V0Q1 3086 aa12.31□□□□□ -0.44
Ebf3-204ENSMUST00000169486 D730001G18RikA0A087WQU7 115 aa12.3□□□□□ -0.44
Ebf3-204ENSMUST00000169486 Zfand2aQ9JII7 171 aa12.3□□□□□ -0.44
Ebf3-204ENSMUST00000169486 Apoc4Q61268 124 aa12.3□□□□□ -0.44
Ebf3-204ENSMUST00000169486 Znf580Q9DB38 172 aa12.29□□□□□ -0.44
Ebf3-204ENSMUST00000169486 1700074P13RikQ9D9G7 251 aa12.29□□□□□ -0.44
Ebf3-204ENSMUST00000169486 Psmb11Q8BG41 302 aa12.28□□□□□ -0.44
Ebf3-204ENSMUST00000169486 UqcrqQ9CQ69 82 aa12.28□□□□□ -0.44
Ebf3-204ENSMUST00000169486 FshbQ60687 130 aa12.27□□□□□ -0.44
Ebf3-204ENSMUST00000169486 Gm10300Q8C8P7 189 aa12.27□□□□□ -0.45
Ebf3-204ENSMUST00000169486 Ccdc179J3QM76 67 aa12.27□□□□□ -0.45
Ebf3-204ENSMUST00000169486 H2al1kJ3QP08 105 aa12.26□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 50.6 ms