RNA–Protein interactions for RNA: ENSMUST00000165375.2

Hoxc4-202, Transcript of Homeobox protein Hox-C4, mousemouse

TSL 1 (best) BASIC

Gene Hoxc4, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-202ENSMUST00000165375 Xcl1P47993 114 aa11.96□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Cox17P56394 63 aa11.96□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Hist1h4aP62806 103 aaKnown RBP11.96□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Trav11A0A0B4J1J9 114 aa11.95□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Trav9n-2A0A0G2JDP3 113 aa11.95□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Gm7138L7N2C3 230 aa11.95□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Znf740Q6NZQ6 180 aa11.95□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Gm9747Q810H1 104 aa11.95□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Gm3238W4VSP7 230 aa11.95□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 B230217C12RikE9Q3Z1 139 aa11.95□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Brwd1Q921C3 2304 aa11.94□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Igf1P05017 153 aa11.94□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Klk11Q9QYN3 276 aa11.94□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Hivep3A2A884 2348 aa11.93□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Col6a5A6H584 2640 aa11.93□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 PolqQ8CGS6 2544 aa11.93□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Fgfbp3Q1HCM0 245 aa11.93□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Ly6hQ9WUC3 139 aa11.93□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Fgf23Q9EPC2 251 aa11.92□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Gm10509O88255 85 aa11.91□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Q8R092 253 aa11.91□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 5730596B20RikQ8BQ08 205 aa11.9□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Gm4861Q8C5A4 106 aa11.9□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Nop10Q9CQS2 64 aa11.9□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Srrm2Q8BTI8 2703 aaKnown RBP11.9□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Trav13d-1A0A075B606 110 aa11.9□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Trdv5A0A075B661 115 aa11.9□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Gm3618D3Z4P5 127 aa11.9□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 4930546C10RikE9Q4Y3 121 aa11.9□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Acyp1P56376 99 aa11.9□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Gm10577Q3UDV9 132 aa11.9□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Gm2916Q9D9B9 127 aa11.9□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Ndufs7Q9DC70 224 aa11.9□□□□□ -0.5
Hoxc4-202ENSMUST00000165375 Gm11020F6ZGD5 61 aa11.89□□□□□ -0.51
Hoxc4-202ENSMUST00000165375 PemtQ61907 199 aa11.89□□□□□ -0.51
Hoxc4-202ENSMUST00000165375 Chchd7Q8K2Q5 85 aa11.89□□□□□ -0.51
Hoxc4-202ENSMUST00000165375 Pla2g1bQ9Z0Y2 146 aa11.89□□□□□ -0.51
Hoxc4-202ENSMUST00000165375 D130052B06RikQ3UW13 202 aa11.89□□□□□ -0.51
Hoxc4-202ENSMUST00000165375 ApcQ61315 2845 aa11.88□□□□□ -0.51
Hoxc4-202ENSMUST00000165375 Smlr1J3QMJ4 66 aa11.87□□□□□ -0.51
Hoxc4-202ENSMUST00000165375 Tmem258P61166 79 aa11.87□□□□□ -0.51
Hoxc4-202ENSMUST00000165375 Rpl18aP62717 176 aaKnown RBP11.87□□□□□ -0.51
Hoxc4-202ENSMUST00000165375 Lage3Q9CR70 148 aa11.87□□□□□ -0.51
Hoxc4-202ENSMUST00000165375 Notch2O35516 2470 aa11.87□□□□□ -0.51
Hoxc4-202ENSMUST00000165375 7530416G11RikJ3QJX6 159 aa11.86□□□□□ -0.51
Hoxc4-202ENSMUST00000165375 Lst1O08843 95 aa11.86□□□□□ -0.51
Hoxc4-202ENSMUST00000165375 Gm10549Q3URY4 149 aa11.86□□□□□ -0.51
Hoxc4-202ENSMUST00000165375 Samd13D3YUG0 102 aa11.85□□□□□ -0.51
Hoxc4-202ENSMUST00000165375 SelenowP63300 88 aa11.85□□□□□ -0.51
Hoxc4-202ENSMUST00000165375 Sostdc1Q9CQN4 206 aa11.85□□□□□ -0.51
Hoxc4-202ENSMUST00000165375 Ighv8-11A0A075B5X4 119 aa11.84□□□□□ -0.51
Hoxc4-202ENSMUST00000165375 P01823 113 aa11.84□□□□□ -0.51
Hoxc4-202ENSMUST00000165375 Ntn5Q3UQ22 452 aa11.84□□□□□ -0.51
Hoxc4-202ENSMUST00000165375 Igkv4-91A0A075B5L2 119 aa11.84□□□□□ -0.51
Hoxc4-202ENSMUST00000165375 Gm19935A0A1B0GSF9 52 aa11.84□□□□□ -0.51
Hoxc4-202ENSMUST00000165375 Gm7137J3QMW1 236 aa11.84□□□□□ -0.51
Hoxc4-202ENSMUST00000165375 Igsf10Q3V1M1 2594 aa11.84□□□□□ -0.51
Hoxc4-202ENSMUST00000165375 4930519P11RikQ9CUJ8 166 aa11.83□□□□□ -0.52
Hoxc4-202ENSMUST00000165375 Igkv4-78A0A0A6YYE5 119 aa11.83□□□□□ -0.52
Hoxc4-202ENSMUST00000165375 Gm20726G3UX18 150 aa11.83□□□□□ -0.52
Hoxc4-202ENSMUST00000165375 Defa4P28311 92 aa11.83□□□□□ -0.52
Hoxc4-202ENSMUST00000165375 Rpl28P41105 137 aaKnown RBP11.83□□□□□ -0.52
Hoxc4-202ENSMUST00000165375 Dnal4Q9DCM4 105 aa11.83□□□□□ -0.52
Hoxc4-202ENSMUST00000165375 Ighv1-62-1A0A075B5U3 116 aa11.82□□□□□ -0.52
Hoxc4-202ENSMUST00000165375 Phxr5P08399 672 aa11.82□□□□□ -0.52
Hoxc4-202ENSMUST00000165375 Serp2Q6TAW2 65 aa11.82□□□□□ -0.52
Hoxc4-202ENSMUST00000165375 Dand5Q76LW6 185 aa11.81□□□□□ -0.52
Hoxc4-202ENSMUST00000165375 4930518I15RikQ3V2W7 57 aa11.81□□□□□ -0.52
Hoxc4-202ENSMUST00000165375 4930524J08RikQ9CUJ5 163 aa11.8□□□□□ -0.52
Hoxc4-202ENSMUST00000165375 D730001G18RikA0A087WQU7 115 aa11.79□□□□□ -0.52
Hoxc4-202ENSMUST00000165375 6430550D23RikE9Q1X6 194 aa11.78□□□□□ -0.52
Hoxc4-202ENSMUST00000165375 H2al1aQ5M8Q2 105 aa11.78□□□□□ -0.52
Hoxc4-202ENSMUST00000165375 Leap2Q91V13 76 aa11.78□□□□□ -0.52
Hoxc4-202ENSMUST00000165375 Trav13n-1A0A0G2JEU8 110 aa11.77□□□□□ -0.53
Hoxc4-202ENSMUST00000165375 1700011M02RikB1AX35 88 aa11.77□□□□□ -0.53
Hoxc4-202ENSMUST00000165375 Sh2d1aO88890 126 aa11.76□□□□□ -0.53
Hoxc4-202ENSMUST00000165375 MifP34884 115 aaKnown RBP11.76□□□□□ -0.53
Hoxc4-202ENSMUST00000165375 Vmo1Q5SXG7 201 aa11.76□□□□□ -0.53
Hoxc4-202ENSMUST00000165375 9430069I07RikQ9CX21 111 aa11.76□□□□□ -0.53
Hoxc4-202ENSMUST00000165375 PtprqP0C5E4 2300 aa11.76□□□□□ -0.53
Hoxc4-202ENSMUST00000165375 Tmem86bQ497J1 226 aa11.75□□□□□ -0.53
Hoxc4-202ENSMUST00000165375 Gm16381A0A1Y7VKT9 73 aa11.75□□□□□ -0.53
Hoxc4-202ENSMUST00000165375 9430015G10RikA2ASP7 199 aa11.75□□□□□ -0.53
Hoxc4-202ENSMUST00000165375 P01745 121 aa11.75□□□□□ -0.53
Hoxc4-202ENSMUST00000165375 Gpha2Q925Q5 128 aa11.75□□□□□ -0.53
Hoxc4-202ENSMUST00000165375 Shisa2Q8QZV2 295 aa11.74□□□□□ -0.53
Hoxc4-202ENSMUST00000165375 Tm2d2Q8R0I4 213 aa11.74□□□□□ -0.53
Hoxc4-202ENSMUST00000165375 Hbb-b2P02089 147 aa11.74□□□□□ -0.53
Hoxc4-202ENSMUST00000165375 Klk9Q32M27 251 aa11.74□□□□□ -0.53
Hoxc4-202ENSMUST00000165375 Gm10542F6XDR3 90 aa11.72□□□□□ -0.53
Hoxc4-202ENSMUST00000165375 Ighv1-56A0A0A6YXG2 117 aa11.71□□□□□ -0.53
Hoxc4-202ENSMUST00000165375 Gm7257D3YX25 99 aa11.71□□□□□ -0.53
Hoxc4-202ENSMUST00000165375 Tmem243B2RVB9 118 aa11.71□□□□□ -0.54
Hoxc4-202ENSMUST00000165375 Tmem254aP0DN89 123 aa11.71□□□□□ -0.54
Hoxc4-202ENSMUST00000165375 Tmem254bP0DN90 123 aa11.71□□□□□ -0.54
Hoxc4-202ENSMUST00000165375 Tmem254cP0DN91 123 aa11.71□□□□□ -0.54
Hoxc4-202ENSMUST00000165375 Defa7P50705 93 aa11.71□□□□□ -0.54
Hoxc4-202ENSMUST00000165375 Rpl36aP83882 106 aaKnown RBP11.71□□□□□ -0.54
Hoxc4-202ENSMUST00000165375 Ighv2-9-1A0A075B697 116 aa11.7□□□□□ -0.54
Hoxc4-202ENSMUST00000165375 Dad1P61804 113 aa11.7□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 44.1 ms